Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco01g3369 | ATGAAGGGGGAATCAACTGGACTTATCATTGGGATTTCAATTGGTGTAATTATTGGCGTTGTTTTGGCTATTTCTGCACTTTTTTGCGTGAGATATCATAGGAAGCAATCGCAGATTGGGAATAGCAGTTCACAGAGGACGGCTACCATACCAATCCGTACAAATGGTGATGATTCTTGTACCATTCCATCTGACTCAACCTTAGGACCAGAATCTCCTGTTAAGTCTGGACGTAGCGCCATGTCCTTCTGGTTTGATGGCTTCAAGAGAAGCAATGTCGTTTCAGCTTCTGGAATACCCGAATATCCTTACAAGGAATTGCAGAAGGCCACCCGTAACTTTACAACACTTATAGGACAAGGTGCATTTGGTCCTGTTTACAAAGCTCAGATTTCCACTGGCGAGACCGTTGCAGTTAAAGTTCTTGCCACTAATTCTAAGCAAGGAGAGAGAGAATTTCATACAGAGGTGATGTTGTTGGGAAGACTGCACCATAGAAACCTGGTTAATTTGGTTGGATATTGCGCAGAGAAGGGACAGCATATGCTTGTATATGTGTTTATGAGCAAAGGCTGCTTGGCTTCCCACTTGTACAGTAAGGAGAATGAAGCAATGAGCTGGGATTTGAGAGTTCGCATTGCTCTAGATATAGCGAGAGGCTTGGAGTATCTTCATGACGGGGCGGTTCCTCCAGTAATCCACAGAGATATCAAGTCTTCTAACATTTTGCTAGACCAGTCCATGAGAGCCAGGGTTGCAGATCTTGGGCTGTCAAGAGAAGAGAAGGTGGACAAGCAGGCAGCCGTCAGAGGTACATTTGGGTATCTAGACCCAGAGTACATATCCTCAGCAACATTCACCAAGAAAAGTGATGTCTACAGCTACGGAGTGTTGCTATTTGAACTCATAGCAGGCAGAAATCCTCAACAAGGTCTTATGGAATTAGTTGACCTAGCGTTAATGGATGAACAGGCGGCAATGAACAGTGAGGGGAAAATGGGGTGGGAGGAGATAGTGGACTCTGCACTGGAAGGCGAATATGATGTAGAAGAGCTGAATGAAATGGCTGGGCTTGCATACAAATGCATAAACCGCGCCCCAAGGAAGAGACCTTCCATGAGAGACGCGGTTCAAGTGCTCACAAAGATTCTTAAAACAAGAAACGGTAAAAGGCGTCACAGGAATGGATTGTCTGCTACCGCAGATGAAGTGTGCATTGATGTGGATCATCACCCTCATGCAAGGATTCATCGCAGAGAAGAATCTATGGATAGTGCAGCTGACACCTATGACTAA | 1296 | 0.4514 | MKGESTGLIIGISIGVIIGVVLAISALFCVRYHRKQSQIGNSSSQRTATIPIRTNGDDSCTIPSDSTLGPESPVKSGRSAMSFWFDGFKRSNVVSASGIPEYPYKELQKATRNFTTLIGQGAFGPVYKAQISTGETVAVKVLATNSKQGEREFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGCLASHLYSKENEAMSWDLRVRIALDIARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADLGLSREEKVDKQAAVRGTFGYLDPEYISSATFTKKSDVYSYGVLLFELIAGRNPQQGLMELVDLALMDEQAAMNSEGKMGWEEIVDSALEGEYDVEELNEMAGLAYKCINRAPRKRPSMRDAVQVLTKILKTRNGKRRHRNGLSATADEVCIDVDHHPHARIHRREESMDSAADTYD | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco01g3369 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 405 | - | - | |
| Acco01g3369 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 86 | 187 | - | - | |
| Acco01g3369 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 90 | 380 | IPR011009 | - | |
| Acco01g3369 | 431 | SMART | serkin_6 | 112 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco01g3369 | 431 | MobiDBLite | consensus disorder prediction | 43 | 75 | - | - | |
| Acco01g3369 | 431 | PANTHER | OS01G0750732 PROTEIN | 3 | 388 | - | - | |
| Acco01g3369 | 431 | CDD | STKc_IRAK | 118 | 383 | - | - | |
| Acco01g3369 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco01g3369 | 431 | MobiDBLite | consensus disorder prediction | 43 | 73 | - | - | |
| Acco01g3369 | 431 | Pfam | Protein tyrosine and serine/threonine kinase | 115 | 378 | IPR001245 | GO:0004672|GO:0006468 | |
| Acco01g3369 | 431 | FunFam | Calcium/calmodulin-regulated receptor-like kinase 1 | 86 | 187 | - | - | |
| Acco01g3369 | 431 | FunFam | calcium/calmodulin-regulated receptor-like kinase 1 | 188 | 402 | - | - | |
| Acco01g3369 | 431 | ProSiteProfiles | Protein kinase domain profile. | 112 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco01g3369 | Acco-ChrAcco01 | 50779666 | 50781583 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco01g3369 | 62 | 415 | Receptor kinase-like Gene Family | AT2G28970 | 40.055 | 2.04e-73 | 243 |
Transcription factors information