Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3367 ATGGACTCGCAGCAGCTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCTTACACGCCATCTTATTCCACTATCCCATCACTACCTACAAGGTTCCTCGGATCCTTGAAATTTGACACAGGAAACTCACCCAATTCACCCTTTTCTACTCAATTTGATTCGGATTCTCTCTCTACATTGAGTGACGGTCAGGAGCAGCACGGTTCTGGGGAGATTCTTTCTGGTTTCAGCCCTTCTTATAACTCTTCTCTGGAAACTAATTATTACTTAAACAGGTTAATCTCACCTGCGGACCGTCTCCAAGACAGTCTGCATCCATATTTTGCTAGGAGGTTTCTTGCACAGGATGCAAGTTCTAGCCAAAAGATCAGGCACGCTTTGCTGGAGTTAGAGTCTGCTCTGATGGCCCCTGATGACCCTGATGTAGCTACCACATCAAATATTTCTTTGAGTGGGATTAACAAGCCTACAACTTCTGGCCAAAAGCATGGGCCTTGGAACCAGGAGCGTCAAGGGTCACACTACCTTCAAAGCCAGCCATCTTTTGCCACTAGCACGAGGCAGTCAAATGAAGTTGCACACGTTAAGAAGCGTCACAAACTAATGGAGGAAGCATGGCTCCAGGGCTTCCCACCTAGCAGTTTAAAAGAATTGTTGATTGCTTGCGCCAAAGCCCTCTCTGAAAGCAACATCAAAGTCTTTGACGAGTTGATTGAAAAGGCTAAAAGTGCTGTGTCTATCTGTGGCGAGCCAATCCAGCGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGAAAGAGGCATCAGGTAATAGCATATATCATGCCCTCAGGTGCCGGGAACCTGAAGGCAAAGACCTGCTCTCGTACATGCACATGCTGTATGAGATTTGCCCCTATTTTAAATTTGGTTACATGGCTGCCAATGGAGCGATAGCTGAAACTTGCAGAAATGAAGACCGCGTTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGGTGACACTCCTTCAAGCTCTTGCAACAAGGCCTGGAGGGGCACCCCATGTCCGGATCACTGGAATTGATGATCCCATCTCTCGATATGCACGTGGTGACGGCCTAGATGCAGTTGAGAAAAAATTGACCGCGATCTCAGACAAATTTGGTATCCCAGTAGAGTTTCATGGGGTGCCTGTGTTTGCTTCAGAAGTTACAAGGGACATGCTTGATGTAAGGCCTGGAGAGGCTTTGGCTGTGAACTTTCCCCTGCATCTGCATCACACAGCTGATGAGAGTGTTGATGTGAACAACCCGAGGGATGAACTTCTGAGAATGGTGAAGTCACTTGGTCCCAAGGTGACCACGTTACTGGAACAGGAATCCAACACAAACACCACGCCATTCTACAACAGGTTCTTAGAAACATTGGACTACTACTTGGCCATGTTCGAGTCCATTGATGGCACACTGCCAAGAAATAGCAAGGAGCGGATTAACGTAGAGCAGCACTGTTTGGCGAGGGATATCGTGAACGTCATTGCTTGTGAAGGGAAGGAAAGGATAGAGCGACACGAGCTGTTGGGAAAGTGGAAGTCAAGGTTGACAATGGCCGGATTCCGACAGTATCCATTGAGCTCTTACGTCAATTCTGTGATCAGAAGCCTGCTTGGGTACTATTCAGAGCATTATACGCTGGTGGAGAAGGATGGGGCTATGTTGTTAGGGTGGAAACACAGAAATCTGATATCTGCCTCAGCCTGGCATTGA 1758 0.475 MDSQQLFSFSVTGSGIPYTPSYSTIPSLPTRFLGSLKFDTGNSPNSPFSTQFDSDSLSTLSDGQEQHGSGEILSGFSPSYNSSLETNYYLNRLISPADRLQDSLHPYFARRFLAQDASSSQKIRHALLELESALMAPDDPDVATTSNISLSGINKPTTSGQKHGPWNQERQGSHYLQSQPSFATSTRQSNEVAHVKKRHKLMEEAWLQGFPPSSLKELLIACAKALSESNIKVFDELIEKAKSAVSICGEPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEICPYFKFGYMAANGAIAETCRNEDRVHIIDFQIAQGVQWVTLLQALATRPGGAPHVRITGIDDPISRYARGDGLDAVEKKLTAISDKFGIPVEFHGVPVFASEVTRDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVTTLLEQESNTNTTPFYNRFLETLDYYLAMFESIDGTLPRNSKERINVEQHCLARDIVNVIACEGKERIERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLGYYSEHYTLVEKDGAMLLGWKHRNLISASAWH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3367 585 ProSiteProfiles GRAS family profile. 206 585 IPR005202 -
Acco01g3367 585 MobiDBLite consensus disorder prediction 44 76 - -
Acco01g3367 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 581 IPR005202 -
Acco01g3367 585 Pfam GRAS domain family 215 584 IPR005202 -
Acco01g3367 585 MobiDBLite consensus disorder prediction 145 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3367 Acco-ChrAcco01 50764719 50766476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3367 207 584 GRAS Transcription Factor Family AT5G48150 62.797 3.91e-171 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3367 GRAS 2.3e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3367 01 50764719 50766476 Acco08g0856 08 7749480 7751225 CCT
Acco01g3367 01 50764719 50766476 Acco01g3367 01 50764719 50766476 ECH