Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3354 ATGGGTATTCTTTCTTTCCTGTTCCTGATGATCATTGCTTATTTACTTCCTTCCTTCTCAGTTTTAGTGGCATTAGATTCCATTGCTCCGACCCAGTTTATAACAGATGGCATGACCTTAGTTTCTGAAGGTGGAGACTTTGAACTTGGTTTCTTCAGTCCTGGCAAATCAAAGAAACGCTACATTGGTATTTGGTACAAGACTATCCCAATTCAGACTGTAGTTTGGGTTGCAAACAGAGTAAACCCAATCAACGATTCATCAGGCGTTCTAGCATTAACCACCAGCGGCAACCTCGTCCTACGCCAAATCGACACTGTCGTTTGGCAGGCAAACTCAGAGGAAACAGCACGTGATCCAGTGGTGCAGCTCTTGGACTCTGGCAATCTGGTGGTGAGAGAGGGAAACGAAGCAAATTCAGAAAATTACTTGTGGCAAAGCTTCGACTTTCCGTCGGATACATTAATGCCAGGTATGAAATTTGGATATAACCTGAAGACAGGAAAGAACTGGACTCTCACAGCTTGGAAGAACCCCGATGATCCCTCTCCAGGAGACTTTTCTTGCGTTACAGATACCCATAACTATCCAGATTCAGCATTAATGAAAGGAGATAAGGTTTATAGCAGATTTGGACCATGGAATGGTCTCCATACAAGTGGCTCACCGGACGTCAAACCCAACCCTGTTTATCACTTCAAATTTGTCTACAACAAGGAGGAGATCTCCTACACATACTATCTAACAAACAGTTCTGTATACTCAAGGATTGTAATGAATCAAACTGATTACGTTCGGTATCGGTATGTGTGGGTGGAAGCTAATCAAAACTGGATGGTTTATAAATCAAAGCCAGTTGATAACTGTGACCGTTATGGTTTATGTGGAGCCAATGGGAATTGTATCATCAATGAATCACCAGTTTGTCAGTGCTTAAAAGGTTTCAGTCCTAAGTCACCACAAGCGTGGAATTCTATGGATTGGTCTGCTGGTTGTATAAGAAATAAACCTCTGAATTGCTCTGAGGATGGGTTTATCAAATTGCAAGGATTGAAGGTGCCGGATACAACACGTAGTTGGCTTGATGAGACAATGGGCTTAGAGGAATGTAGACAGAGATGCTTGAATAATTGTTCTTGTATGGCCTTCACAAATTCAGATGTAAGAGGGCAAGGGAGTGGGTGTGCCATGTGGTTTGGTGATCTTATTGATATTAGACAGTTTGCCTCTGGAGGACAGGATTTGTATGTACGAATGGCTGCTTCAGAATTTGAAGTGACATATGGACGCAGAAAGAAATTGATAATAATAGTTGCTACCACCATTGCTGCAATTTCTGGGATGCTTCTAGTTGGATGTTACTTTATTTGCAAGGTCCGCAGAAAGAAGACTGATAAAGCAAAAATCAAAGAAGAAGATCAACGCAGTGAAGGATCTGAAGATGATGTAGACCTCACTTTGCTCAACCTGCCTGCTATAGCTAATGCCACCAATAACTTTTCGCTAGAGAACAAAATTGGAGAAGGTGGATTTGGAACTGTTTATAAGGGAAAATTAGCGAATGGGAAATTAATTGCAGTGAAGAGACTCTCTAGGAGCTCAGGACAGGGATCAATTGAATTCAAGAATGAAGTGAGACTAATTGCAAGACTTCAGCACCGAAATCTTGTAAAACTTATTGGTTGCTGCATTCAAGGACAAGAGAAGATGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGAATTTCTTCATCTTTGATGAAAATCGAGGGAAGTTGCTAGATTGGCCCAAACGTTTGAACATAATTTGTGGCATTGCTCGAGGCCTCATGTATCTTCATCAAGATTCTAGATTAAGAATTATTCATAGAGATCTAAAGGCAAGTAATATTTTGCTCGATGAGAAGTTGAATCCAAAAATAGCTGATTTCGGCATGGCTAAAACTTTTGGTGGAGAGCAAACTGAAGGCAATACAAATAGAGTAGTGGGTACCTATGGTTACATGGCACCAGAGTATGCAGCAGATGGATTATTTTCAATAAAGTCTGATGTGTTTAGCTTTGGTATTTTGGTAATGGAAATCATATATGGGAAGAGAAACAGAGGGTTCTACAATGCAGACCATTCTCGTAACCTTATATGTTATGCATGGTTGCTGTGGAAAGAAGGGAGGGCTTTAGAATTGATAGACAGAAACATAGAGGAGACATATGTTGTGTCAGAAATAATGAGATGCATCCACATTAGTCTTCTGTGTGTGCAACAGCATCCTGAAGACAGACCCAACATGTCTTCTGTTGTTCTGATGTTAGGGAGTGAGAATGAATTGAATGAGCCTAAACAACCTGGTTTCTTTACTGGGAAGGCCACACTTGAAGCAACTTCATCATCAAGTCATCACATGCAATCTGGATCAACTAATGAAATAACGTTCACCTTACTAGAAGCTCGATGA 2457 0.4078 MGILSFLFLMIIAYLLPSFSVLVALDSIAPTQFITDGMTLVSEGGDFELGFFSPGKSKKRYIGIWYKTIPIQTVVWVANRVNPINDSSGVLALTTSGNLVLRQIDTVVWQANSEETARDPVVQLLDSGNLVVREGNEANSENYLWQSFDFPSDTLMPGMKFGYNLKTGKNWTLTAWKNPDDPSPGDFSCVTDTHNYPDSALMKGDKVYSRFGPWNGLHTSGSPDVKPNPVYHFKFVYNKEEISYTYYLTNSSVYSRIVMNQTDYVRYRYVWVEANQNWMVYKSKPVDNCDRYGLCGANGNCIINESPVCQCLKGFSPKSPQAWNSMDWSAGCIRNKPLNCSEDGFIKLQGLKVPDTTRSWLDETMGLEECRQRCLNNCSCMAFTNSDVRGQGSGCAMWFGDLIDIRQFASGGQDLYVRMAASEFEVTYGRRKKLIIIVATTIAAISGMLLVGCYFICKVRRKKTDKAKIKEEDQRSEGSEDDVDLTLLNLPAIANATNNFSLENKIGEGGFGTVYKGKLANGKLIAVKRLSRSSGQGSIEFKNEVRLIARLQHRNLVKLIGCCIQGQEKMLVYEYMPNGSLNFFIFDENRGKLLDWPKRLNIICGIARGLMYLHQDSRLRIIHRDLKASNILLDEKLNPKIADFGMAKTFGGEQTEGNTNRVVGTYGYMAPEYAADGLFSIKSDVFSFGILVMEIIYGKRNRGFYNADHSRNLICYAWLLWKEGRALELIDRNIEETYVVSEIMRCIHISLLCVQQHPEDRPNMSSVVLMLGSENELNEPKQPGFFTGKATLEATSSSSHHMQSGSTNEITFTLLEAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3354 818 ProSiteProfiles PAN/Apple domain profile. 340 420 IPR003609 -
Acco01g3354 818 CDD STKc_IRAK 506 771 - -
Acco01g3354 818 Gene3D - 21 148 IPR036426 -
Acco01g3354 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Acco01g3354 818 CDD PAN_AP_plant 337 420 - -
Acco01g3354 818 CDD B_lectin 31 151 IPR001480 -
Acco01g3354 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Acco01g3354 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 762 - -
Acco01g3354 818 SMART ntp_6 340 419 IPR003609 -
Acco01g3354 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 575 - -
Acco01g3354 818 Pfam Protein tyrosine and serine/threonine kinase 501 769 IPR001245 GO:0004672|GO:0006468
Acco01g3354 818 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Acco01g3354 818 Pfam PAN-like domain 340 405 IPR003609 -
Acco01g3354 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Acco01g3354 818 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Acco01g3354 818 SUPERFAMILY Protein kinase-like (PK-like) 487 778 IPR011009 -
Acco01g3354 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 419 - -
Acco01g3354 818 Pfam Domain of unknown function (DUF3403) 775 818 IPR021820 GO:0004674
Acco01g3354 818 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Acco01g3354 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Acco01g3354 818 ProSiteProfiles Protein kinase domain profile. 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3354 818 Gene3D Transferase(Phosphotransferase) domain 1 576 784 - -
Acco01g3354 818 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3354 818 Pfam D-mannose binding lectin 73 177 IPR001480 -
Acco01g3354 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Acco01g3354 818 SMART blect_4 31 151 IPR001480 -
Acco01g3354 818 Gene3D Phosphorylase Kinase; domain 1 459 575 - -
Acco01g3354 818 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Acco01g3354 818 MobiDBLite consensus disorder prediction 796 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3354 Acco-ChrAcco01 50641686 50645552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3354 434 803 Receptor kinase-like Gene Family AT4G23190 51.604 1.42e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3354 PK_Tyr_Ser-Thr 5.7e-50 CL0016