Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3352 ATGTATGAATCATTCAACTACGGTTATGCAGAATCTGGGAACAATAAAAAGTTGATAATGATCGTTGCTATCCCCATTGCTGCTATTTTCTGTACGGTTTTAGTTGGGGCCTATATCATTTACAAAGTCCGCAGGCAGAGGATTGAGAAATCAAAAAATTCAGAAGTTGAAATTCAAAGCAATGAAAGAGATGATCTAGATCTCCCACTGTTTGATCTTCCAACAATAGCACATGCCACCGAAAATTTTCAAGAGAGTTTCAATATGCAGGGAAAGTTACCAAATGGACAGGAAATTGCTGTGAAGAAGCTTTTAAGAATGTCAGAACTAGGATTGATTCAATTTAAAAATGAAGTAAAATTTATCGTCAAACTCCAGCATCGGAATCTGGTAAAACTTCTTGGTTGCTGCATTGAAGATCAAGAAAAATTGTTGGTATATGAGCACATGCCAAATAGAAGTTTGGACTTCTTCATTTTTGATGAAACCAAAAGGAAATTGTTGGATTGGTTTAAGCGCTTCTACATTATTATGGGAATTGGTCGAGGTCTTTTATATCTTCATCAAGATTCAAGGTTACGGATAATACACAGGGATTTGAAAGCAAGCAACGTTTTACTTGATGACAAGTTGATCCCAAAAATATCAGATTTTGGGCTAGCTAAGAATTTTGGAGAAGAGGAAGTAGAAGGCAGTACAAAAAGAGTAGTGGGCACTTATGGGTATATGGCTCCTGAATATGCAGCAGACGGGCTATATTCAATTAAATCTGATGTCTTTAGTTATGGTATATTAGTACTAGAAATTATTTCTGGAAAGAAAAATAGAGGGTTTTATGTAGAAGACTCCACTCACAACCTTGCTAGTCACGCATGGTTACTATGGAATGAAGGGAAAGTTTTGGAATTGATTGATGAGAACATAGAGGACTCGTGCAATGCATCAGAAGTATTAAGGTGCCTTCATGTGAGTCTGTTGTGTGTGCAACAGAACCCAGATGATAGACCCACCATAGGATCTGTAATGTTGATGCTGGAAAGTGAAGTCGCACTCCCTGAACCTAAGCAGCCTGGTTTCTTTCATGGCATGGGCTCACTCAAATTGCATACTTCTAGCTCAAGTCAGAAGGAATTTAGCTCAACCAATGAAATGACTATGAGCTTACTTGATGCCCGATGA 1179 0.3791 MYESFNYGYAESGNNKKLIMIVAIPIAAIFCTVLVGAYIIYKVRRQRIEKSKNSEVEIQSNERDDLDLPLFDLPTIAHATENFQESFNMQGKLPNGQEIAVKKLLRMSELGLIQFKNEVKFIVKLQHRNLVKLLGCCIEDQEKLLVYEHMPNRSLDFFIFDETKRKLLDWFKRFYIIMGIGRGLLYLHQDSRLRIIHRDLKASNVLLDDKLIPKISDFGLAKNFGEEEVEGSTKRVVGTYGYMAPEYAADGLYSIKSDVFSYGILVLEIISGKKNRGFYVEDSTHNLASHAWLLWNEGKVLELIDENIEDSCNASEVLRCLHVSLLCVQQNPDDRPTIGSVMLMLESEVALPEPKQPGFFHGMGSLKLHTSSSSQKEFSSTNEMTMSLLDAR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3352 392 Gene3D Phosphorylase Kinase; domain 1 57 149 - -
Acco01g3352 392 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 150 353 - -
Acco01g3352 392 SUPERFAMILY Protein kinase-like (PK-like) 93 371 IPR011009 -
Acco01g3352 392 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3352 392 ProSiteProfiles Protein kinase domain profile. 42 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3352 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 391 - -
Acco01g3352 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Acco01g3352 392 Pfam Domain of unknown function (DUF3403) 348 392 IPR021820 GO:0004674
Acco01g3352 392 Pfam Protein tyrosine and serine/threonine kinase 95 342 IPR001245 GO:0004672|GO:0006468
Acco01g3352 392 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3352 Acco-ChrAcco01 50623164 50625205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3352 26 359 Receptor kinase-like Gene Family AT4G23230 49.711 1.78e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3352 PK_Tyr_Ser-Thr 2e-40 CL0016