Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3350 ATGGGCCTCCTTCCTTGCTTGAGTATCCTCATTCTTTTCATTCTTCCCATCCTCCATCCTTCCCTGGCACTTGATTCCCTTCGCCAGTCGCAGTTCATCGGCGACAATCGAACCACCTTGGTTTCCAGAGATGGTACCTTTGAACTTGGTTTCTTCACTCCTGGAACTTCCAACAAACGTTACCTTGGCATTTGGTACAAGAACATCCCGGATCATACCGTTGTCTGGGTTGCAAACCGCCTCAACCCGGTCAACGATTCCTCTGTTACCTTAATTATGACCACTTCTGGCGATCTTGTTCTGTCCCAAAACAACACTGTTCTTTGGTCTACAAATTCCACTGCCAAGGCAAAGAGTCCAATCGCCCGGCTCTTGGACACTGGAAATCTTGTGGTGATGGATGAGAACGGAGCAGACCCAGACGCTTATTTGTGGCAAAGCTTTGACTATCCTTGTGATACGTTGTTGCCAGGTATGAAATATGGGTGGGACTTAAAAACTGGTTGGCAATGGAACTTAACAGCTTGGAAGAGCCCTGATGATCCATCTCCTGGAGATTTGACTAGCGTTGAAGTGCTCCATGGCTATCCCGATTCGTACATGATGAAGGGAAACAAAAAGTTCTATCGATTTGGGCCATGGAATGGCGATCATGGGAGTGGTGGTCCTGAAATAAAGCCCAACCCTGTTTATCAATTCACCTTTGTCAACAATGAGAGTGGAATCTATTACATGGACATTTGGAATAACAATTCTGTATTGACAAGATTGGTGTTGAACCAAACAGATTCTACTCGGTATCGTTATGTGTGGCTGGAAAATATCAAAACATGGCAAATTTATTCGACCAAGCCTGTAGATTACTGCGATACTTATGGCCTCTGTGGACCAAATGGGAATTGTATCATTTCTGAATCGCCTGTTTGCCGATGCTTAAAAGGTTTCACGCCCAAGTCCCCACAGGATTGGAATTCGGCGGACTGGAATGAAGGATGTGTGCGAAATACACCTCTGAACTGCTCCGAGAAATATAAAGATGGGTTCATCAAATTTTCGGGCATGAAGGTTCCAGACACTACGCAAACTTGGCTTGACAAGACAATGAATCTAGAGCAATGCAGGATCAAGTGCTTGGAGAATTGTTCTTGCACGGCTTATACTAATTCAGATGTCAGAGGTGGAGGAAGTGGTTGTGCCTTATGGTTTGGTGATCTACTTGATGTCAGATACTACGCTTCTGGGGGGCAAGATCTGTATGTTCGAATGGATGCTTCAGAATTAGAATCAGGGAAGAAAAGGAAGTTGACAATGATTGTTACTATAACTGTTGGTGCAATATTTGGTCTGCTTTTAGTTGGGGGCTATATCTTCTACAGAGTCCGCAGAGACAGGGTTGCTAAATCTCAAGATGTAAGAGATGATATTCCATACTATGAGAGTCCAGATGATAATCTAGATCTCCCCCTGTTTGATCTGGCAACAATAGCAAGCGTCACTGATAACTTCTCAAACAAGAATAAGATTGGAGAAGGCGGATTTGGGCCTGTTTATTGGGGAAAATTATCGAATGGACAAGAAATTGCAGTGAAGAGGCTTTCCATAAAATCAAGACAAGGGCTGGTGGAGTTTAAAAATGAAGTAAAGTTTATTGCAAAACTCCAACATCGAAATCTAGTGAAACTTCTCGGCTGTTGCATCCATGAGCAAGAAAAAATGTTGGTGTATGAATACATGTCAAATAAAAGTTTGGACTCCTTCATTTTTGATGAAACCAATGGAAAGTGGTTAGATTGGTCTAAACGTTTCAACATTATTTTGGGAATTGGTAGAGGTCTTATGTATCTTCATCAAGATTCAAGATTGAGAATCATTCATAGAGATCTAAAAGCAAGTAATATTTTACTTGATGACAAGTTGGTCCCAAAAATATCAGATTTTGGGCTTGCTAAAACTTTCCTAGAGGAACAAACAGAAGGCAATACCAATAGAGTAGTCGGAACTTATGGATATATGGCACCGGAATATGCTGCGGATGGGTTATATTCAGTGAAATCTGATGTTTTTAGTTATGGAATATTAGTATTAGAGATTATATGTGGAAAGAAAAATAGAGGGTTTTATTTAGAAGACTCTAAGCATAATCTCATTGGTCATGCATGGATACTCTGGAAAGAAGGAAGTATTTTAGAATTGATTGACAAGAACATAGAGGAGACTTGCAATGTATCAGAAATATTAAGATGCATTCATGTGAGTTTATTGTGTGTGCAGCAACATCCAGAGAATAGGCCCACCGTAGCATCAGCAGTGTTGATGTTGGAAAGTCAGGTTGAACTTCCTGAGCCTAAACAGCCTGGTTTCTTTCAAGGAAAGGATTCAGTTCAACCACATTCTTCCAACTCATCTGGTCAAAAGCAAAGTAGCTCAAACAATGAAATCTCAATGAGCTTACTTGAAGCCAGATGA 2466 0.4128 MGLLPCLSILILFILPILHPSLALDSLRQSQFIGDNRTTLVSRDGTFELGFFTPGTSNKRYLGIWYKNIPDHTVVWVANRLNPVNDSSVTLIMTTSGDLVLSQNNTVLWSTNSTAKAKSPIARLLDTGNLVVMDENGADPDAYLWQSFDYPCDTLLPGMKYGWDLKTGWQWNLTAWKSPDDPSPGDLTSVEVLHGYPDSYMMKGNKKFYRFGPWNGDHGSGGPEIKPNPVYQFTFVNNESGIYYMDIWNNNSVLTRLVLNQTDSTRYRYVWLENIKTWQIYSTKPVDYCDTYGLCGPNGNCIISESPVCRCLKGFTPKSPQDWNSADWNEGCVRNTPLNCSEKYKDGFIKFSGMKVPDTTQTWLDKTMNLEQCRIKCLENCSCTAYTNSDVRGGGSGCALWFGDLLDVRYYASGGQDLYVRMDASELESGKKRKLTMIVTITVGAIFGLLLVGGYIFYRVRRDRVAKSQDVRDDIPYYESPDDNLDLPLFDLATIASVTDNFSNKNKIGEGGFGPVYWGKLSNGQEIAVKRLSIKSRQGLVEFKNEVKFIAKLQHRNLVKLLGCCIHEQEKMLVYEYMSNKSLDSFIFDETNGKWLDWSKRFNIILGIGRGLMYLHQDSRLRIIHRDLKASNILLDDKLVPKISDFGLAKTFLEEQTEGNTNRVVGTYGYMAPEYAADGLYSVKSDVFSYGILVLEIICGKKNRGFYLEDSKHNLIGHAWILWKEGSILELIDKNIEETCNVSEILRCIHVSLLCVQQHPENRPTVASAVLMLESQVELPEPKQPGFFQGKDSVQPHSSNSSGQKQSSSNNEISMSLLEAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3350 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Acco01g3350 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Acco01g3350 821 Gene3D Phosphorylase Kinase; domain 1 470 577 - -
Acco01g3350 821 CDD TM_EGFR-like 434 467 - -
Acco01g3350 821 SUPERFAMILY Protein kinase-like (PK-like) 486 790 IPR011009 -
Acco01g3350 821 Pfam D-mannose binding lectin 73 177 IPR001480 -
Acco01g3350 821 Pfam Domain of unknown function (DUF3403) 777 821 IPR021820 GO:0004674
Acco01g3350 821 MobiDBLite consensus disorder prediction 781 821 - -
Acco01g3350 821 SMART blect_4 31 151 IPR001480 -
Acco01g3350 821 CDD B_lectin 30 151 IPR001480 -
Acco01g3350 821 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Acco01g3350 821 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Acco01g3350 821 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3350 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Acco01g3350 821 SMART ntp_6 343 422 IPR003609 -
Acco01g3350 821 Pfam Protein kinase domain 503 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3350 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Acco01g3350 821 MobiDBLite consensus disorder prediction 791 821 - -
Acco01g3350 821 Pfam PAN-like domain 340 408 IPR003609 -
Acco01g3350 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Acco01g3350 821 CDD EGF_CA 286 319 - -
Acco01g3350 821 Gene3D Transferase(Phosphotransferase) domain 1 578 784 - -
Acco01g3350 821 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Acco01g3350 821 SMART serkin_6 502 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3350 821 Gene3D - 21 148 IPR036426 -
Acco01g3350 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Acco01g3350 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Acco01g3350 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 764 - -
Acco01g3350 821 CDD PAN_AP_plant 336 421 - -
Acco01g3350 821 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3350 Acco-ChrAcco01 50605470 50608714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3350 435 787 Receptor kinase-like Gene Family AT4G23230 54.802 4.57e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3350 Pkinase 4.1e-48 CL0016