Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3346 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCTCCAGAAACTCCACCAGGTTCGAAACTGAGGCTTCTCAATCCTCCAACTTCGCTTGGCAACACACAGACATGTCGTCTCATCATGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCTAACCCCAACCTCCACATGATGGGTCTAGGCCTCTCTTCCCAACCTCTCGACTGGAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGTGGGGAGAGCAGTTTCTTGAACGCATCAAGCACGAATTTTCAGCAAGAAAGTGCGATGATGGGGTTGTCTCCTCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCTGAGTCCTCTTCTTCAACCAACGAGTTCAAACGAGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAGTATAGTTCTGGGGAAAGTACTGTTACAACCCAAGGCTTAGCCTCTAGTCCTAACTTTCAGATGGATTTGTATGGCAACTCATCCTTATTACAAGGACTATTAGGACCCGATAATAATAACAGTCAAGTCCAGTATGATCATCAGAATCGCCAGATTAACTTGCCATACCAGTCATCAAGCTACGGATTGAACAGTAACGATCAGTTAATGCCTCCATGGTCTAAAGTTCCTCAATTTCTGAGAGCTTCACCTCCTAAACAACAACAACCACCCCATAATAACAATAGTCAGTTGCATTTCGCAAACAACGCTCCCTTCTGGAACGCTTCTGAGGCCTCCAATATTAAAGATGTTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAATCTTCGATATTCAATCCAAGAATATGTGTGAGGTTAGGGAGTCAAGTAGCGTGGTGAAGAAAAGTGGGAGCGAGGCAGCACCCAAAAGGCCTCGGAGCGAAACTCCATCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCAACTGCATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGCACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGAGAGGGGGGAAAGCAAGATCTGAGAAGCAGAGGGCTATGCCTGGTGCCAGTGTCGAGTACATTTCCAGTGACTCAAGAAACCGCAGTTGATTTTTGGACGCCAACATTTGGAGGAACATTCAGATAA 1311 0.4653 MAEDQFQATGNWWDSASRNSTRFETEASQSSNFAWQHTDMSSHHDLKPRSSMAASPSSSDPNPNLHMMGLGLSSQPLDWNQPSFLRGAEKGGGESSFLNASSTNFQQESAMMGLSPQVQWRDKLFSAESSSSTNEFKRGFSLDQTQFSPQYSSGESTVTTQGLASSPNFQMDLYGNSSLLQGLLGPDNNNSQVQYDHQNRQINLPYQSSSYGLNSNDQLMPPWSKVPQFLRASPPKQQQPPHNNNSQLHFANNAPFWNASEASNIKDVRSGFFPSLQPPFPSPIFDIQSKNMCEVRESSSVVKKSGSEAAPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATAYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGEGGKQDLRSRGLCLVPVSSTFPVTQETAVDFWTPTFGGTFR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3346 436 MobiDBLite consensus disorder prediction 298 325 - -
Acco01g3346 436 FunFam Transcription factor bHLH123 family 326 388 - -
Acco01g3346 436 CDD bHLH_AtbHLH_like 322 373 IPR045239 -
Acco01g3346 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 383 IPR036638 GO:0046983
Acco01g3346 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Acco01g3346 436 MobiDBLite consensus disorder prediction 1 39 - -
Acco01g3346 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 130 417 - -
Acco01g3346 436 MobiDBLite consensus disorder prediction 1 73 - -
Acco01g3346 436 Gene3D - 326 386 IPR036638 GO:0046983
Acco01g3346 436 MobiDBLite consensus disorder prediction 231 250 - -
Acco01g3346 436 MobiDBLite consensus disorder prediction 380 401 - -
Acco01g3346 436 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3346 Acco-ChrAcco01 50540971 50542961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3346 248 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 64.646 1.27e-72 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3346 01 50540971 50542961 Acco01g3346 01 50540971 50542961 ECH