Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3338 ATGAAGAATTTTACCGTACTGCCTATATGCGTTGTTTTACTCTTCATAAGAACCTCCACTTCATTAGATAGTATCACTCAAAGCCGGCCTTTAAGAGATGGTGAGACCTTAGTTTCAAATGGAGGGGTATTTGAGATGGGGTTTTTCAGTCCTGGAAAATCGAATAACCGCTACTTGGGTATATGGTACATGCATATTTCTCCTTTGACGGTGGTATGGGTGGCCAATAGAGAAGCTCCAATTAGTGATGGCTCAGGAATTTTAGTAACAAACGATCAAGGAATTATTGCCCTGGTTGATAGCACAAATAGGACTGTTTGGTCGTCTAACAGTTCTATAATAGCAGAGAAGCCAATTGTACAGCTCTTGGACACAGGAAATCTTATTGTTAGTGACCAAAAATACAGTAATAAGAACCTCTTCATTTGGCAGAGTTTTGATTATCCCTGTGATACCTTATTGCCAGGAATGAAGCTTGGATTTAACCTAGTCACTGGTCTGAATAGGTTCCTATCTTCTTGGAAAAGTCCAGATGATCCTGGTCAAGGGGAACATGTACTGAAATTAGAGCCTCGAGGGTATCCACAATCATTTCAATTGAGGAGAAATGTCATACATTTCAGAGCAGGATCGTGGAATGGCCTTCATTTTACTGGATATCCAGTTCAGAAACAAAATCCAGTGTACAAGGCTAAGTTTGTTTTCAATGATAAAGAGGCATACTATGAGTATGAACTCGTGAACAGTTCAGTTTACTCCAGAATTATAATGTCTCCTTCAGGCATTGGGAAGCGTTTATTATGGAGTAATCAAAGAGGCGTATGGGAGATTATCTCAGCTAACTTGGCAGATCAATGTGACAATTATGGCTTGTGTGGGGCATACTCTATCTGCGATTTTAGCAGCTCCAGGGTATGTGATTGCTTGAAAGCATTTGTACCCAGAAATGTAAAACAGTGGAATATATCAGATTGGTCTGGTGGGTGTGTTCGAAGAGCTCTATTGGATTGTAATAGTATAGATAGCTTCCGGAAGTATAGAGGTGTGAAATTGCCAGACACATCATCTTCCCAGTTTAATAAGACCATGAGCCTTGAGGAATGTAGGCAATCATGTCTGAGAAATTGTTCTTGTACAGCGTATGCAAATTTGGATATCCGTGATGGAGGAAGTGGCTGCTTAGTTTGGTTTAAAGATCTGATTGACATGAAGCAATTACCGCAAGGAGGACAAGACATTTTTATTCGTGTCCCTGCTTCAGAGCTAGACTTTTTTGAGGATAAACGCTATTGGAACATCAATAAGAGAAAGCTCATAGGAATCGCAGTTGGTTCTGTTGCAATAAACATGAGCATGATACTCATAATTTTTGGATTGATTAGATGTGCAAGGAAAAGTAAACTCAAAAGGTCAGGGATGACAAAAATATATTATAGTAATCCTTGCTACAATAACTTGAGAATGGAAGACACAGAACTACAAATATTTGATTTGTCAGTCATAGTTAAAGCCACTAATAATTTTTCAAGCACCAATAAATTGGGAGAAGGTGGCTTCGGATCAGTCTACAAGGGTACTTTGGGACATGGACAAGAATTAGCTGTGAAAAGGCTATCTGAGGATTCTGTTCAAGGTTTGGAAGAGTTTAAAAATGAAGTTTTGTTGATTGCCAAACTTCAACATCGTAACCTTGTGAAGCTTATTGGTTGCTGCATTGAAAGAGAAGAAAAATTGTTGATCTATGAATACATGCCAAACAAAAGTCTGGACCACTTTATTTTTGATGGAATTAGAAGCAAGTTGTTGGATTGGACAAAGCGTTTTCACATTATTAATGGCATTGCTCGTGGACTTGTCTATCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATTTGAAAACCAGCAATATCTTGCTGGATACAAATTTAAACCCAAAAATATCTGACTTTGGCTTAGCTCGTACATTATGGGGAGATCAAATTGAGGCCAAAACAAACAGGATAGCTGGAACATATGGTTACATGCCTCCTGAATATGTTATGCGCGGAGATTTCTCGATAAAATCAGATGTTTTTAGCTTTGGAGTAATATTATTAGAGATAATCAGTGGAAAAAAGAATAGAGAATATTCAGATTTAGAAAACTTCTTGAATCTTCTTGGATATGCATGGAGACTATGGAGAGAGGGAATGGCGTTGGAATTAATGGATCAAGCATTAGGAGAAAGATTCAATCCATCTGAAGTCATACAATGCATACAAGTGGGCCTGTTATGTGTACAACAAAGACCAGAAGATAGACCAGACATGCCATCTGTCGTTTTAATGCTGAACGGAGAGAAATCATTGCCCGACCCACAAGTTCCAGCTTTCTACATTGAAAGGAAAATACCTGAGGCTGATTCTTCCTCGGAAAATTGCAAACCCTCCTCACCAAATGAAATGTCCCTTTCAATATTCGAGGCAAGATAG 2478 0.3854 MKNFTVLPICVVLLFIRTSTSLDSITQSRPLRDGETLVSNGGVFEMGFFSPGKSNNRYLGIWYMHISPLTVVWVANREAPISDGSGILVTNDQGIIALVDSTNRTVWSSNSSIIAEKPIVQLLDTGNLIVSDQKYSNKNLFIWQSFDYPCDTLLPGMKLGFNLVTGLNRFLSSWKSPDDPGQGEHVLKLEPRGYPQSFQLRRNVIHFRAGSWNGLHFTGYPVQKQNPVYKAKFVFNDKEAYYEYELVNSSVYSRIIMSPSGIGKRLLWSNQRGVWEIISANLADQCDNYGLCGAYSICDFSSSRVCDCLKAFVPRNVKQWNISDWSGGCVRRALLDCNSIDSFRKYRGVKLPDTSSSQFNKTMSLEECRQSCLRNCSCTAYANLDIRDGGSGCLVWFKDLIDMKQLPQGGQDIFIRVPASELDFFEDKRYWNINKRKLIGIAVGSVAINMSMILIIFGLIRCARKSKLKRSGMTKIYYSNPCYNNLRMEDTELQIFDLSVIVKATNNFSSTNKLGEGGFGSVYKGTLGHGQELAVKRLSEDSVQGLEEFKNEVLLIAKLQHRNLVKLIGCCIEREEKLLIYEYMPNKSLDHFIFDGIRSKLLDWTKRFHIINGIARGLVYLHQDSRLRVIHRDLKTSNILLDTNLNPKISDFGLARTLWGDQIEAKTNRIAGTYGYMPPEYVMRGDFSIKSDVFSFGVILLEIISGKKNREYSDLENFLNLLGYAWRLWREGMALELMDQALGERFNPSEVIQCIQVGLLCVQQRPEDRPDMPSVVLMLNGEKSLPDPQVPAFYIERKIPEADSSSENCKPSSPNEMSLSIFEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3338 825 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Acco01g3338 825 Gene3D - 17 146 IPR036426 -
Acco01g3338 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Acco01g3338 825 SUPERFAMILY Protein kinase-like (PK-like) 492 808 IPR011009 -
Acco01g3338 825 SMART blect_4 28 149 IPR001480 -
Acco01g3338 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Acco01g3338 825 Pfam Protein tyrosine and serine/threonine kinase 511 776 IPR001245 GO:0004672|GO:0006468
Acco01g3338 825 Gene3D Transferase(Phosphotransferase) domain 1 584 788 - -
Acco01g3338 825 CDD B_lectin 28 149 IPR001480 -
Acco01g3338 825 CDD PAN_AP_plant 335 418 - -
Acco01g3338 825 Pfam D-mannose binding lectin 70 175 IPR001480 -
Acco01g3338 825 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Acco01g3338 825 SMART serkin_6 508 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3338 825 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Acco01g3338 825 Gene3D Phosphorylase Kinase; domain 1 471 583 - -
Acco01g3338 825 Pfam PAN-like domain 337 403 IPR003609 -
Acco01g3338 825 SMART ntp_6 338 417 IPR003609 -
Acco01g3338 825 MobiDBLite consensus disorder prediction 805 819 - -
Acco01g3338 825 Gene3D Hepatocyte Growth Factor 335 415 - -
Acco01g3338 825 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Acco01g3338 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Acco01g3338 825 MobiDBLite consensus disorder prediction 802 825 - -
Acco01g3338 825 CDD STKc_IRAK 514 781 - -
Acco01g3338 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Acco01g3338 825 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3338 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Acco01g3338 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Acco01g3338 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 766 - -
Acco01g3338 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3338 Acco-ChrAcco01 50487024 50490686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3338 496 825 Receptor kinase-like Gene Family AT4G11530 54.006 2.92e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3338 PK_Tyr_Ser-Thr 3.6e-47 CL0016