Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3337 ATGAGTTGGTCGTTGACATCATGGACAGGTGTAGAAGACCCAAGTCCTGGAAATTTTTCTCTAGAAGCTATCGTGTCCGCTGAGGGGAAGGAGCTAATCATCAAGAAGGAGTCCGTGATATACTGGATTGGCGATGAGCTGTCTAATTTCACGTTTCAAAGCAGTGATAATCGAGACCCTGCCATATGGGACGGAAATTCCTATTTGACTTGGCAGGGGCAGGGGAACTATACTTCTCTAGTGGTTCTAGAAGTTTCTGGGGAGCTTAACCAGCAATTTTGGTCGCAAGATACCATGCAGTGGGTTTCTTTGTTGTCATCCAAGTGCGGTAGATACACAAGCTGTGGAAATTTTGGCATTTGTAACCCACAAGCCACTAATCCTTGTGAGTGCCTCCAAGGATTTAAGGGGAACAAATCTACACGTTGTGTAAGGAAAACAGAGTTATGCAGTAGCATGAGCAGTGACGGGTTTTTACGACTTGATACAGTGGATTTTTCTTCAGATACTCCGCTTAACTTCACAGCTCAGAACGCTTCGACATGTCGAGGAGATTGCTCTATGAATTGTTCTTGTGTCGCTTATGCTTACGATGTTAAGGGCCGTTGCTTGCTCTGGTTTGATCGAGTGTTGAATCTGAAGAACATCTCGGTTGATGTTAGAGCTGATAATTCTAGACTAAGTTTCTATCTCAAACTGTCTCCCTCTGACTTGATTGACAAAGTGTCGAATAATGCAGGGAACAATCCAGATCATAAGTCTAATCAAATCCGGAAGACGTTACTGACAGTTGTGATAGTTATCTTATTTGCTGCATTGCTTATAGGTGCTCTATTTGCTTACTACCGCCGGAGGAGAAAGCTTAGGGAACAAGGGGAGGACCTGCTATCATTTGATATAGGCATGAGCATGAAATATCAGAGCTCCGAGCTTGGTGATGTCGATAAGGTTGGAAAAGTTAACAAGAGGGATGTCAAATTGCCATTGTTTAGTTTTGCAAGTGTTTCTGCAGCAACTAATAACTTTTCACCTGAAAATAAGCTTGGTGAGGGTGGCTTTGGACCCGTTTATAAGGGTAAGCTGTTGAATGGGGATGAGGTTGCTGTCAAAAGGCTATCTGCAAGTTCTGGTCAAGGATGGGAGGAGTTGAAAAATGAAGCTATGCTCATTGCAAAACTCCAACACAACAACCTTGTCAGGCTTTTGGGTTGCTGCATTGAACGTGATGAAAAGATGCTTATCTATGAATTCATGCCAAACAAAAGCCTGGATTTTTTCCTTTTTGATGCAACAAAGCGCCAGATTCTGAATTGGGAAACCCGAGTTCGGATAATTGATGGGATTGCCCAAGGTCTTCTTTATCTTCATCAATACTCTAGGTTCCGAATCATTCATAGAGATCTAAAAGTTAGCAACATTTTGTTGGATATCGACATGAATCCCAAAATATCAGATTTTGGAATGGCAAGACTATTTGGTGGAAATGAATTACAAGCAAATACAACTCGGATAGTTGGAACTTACGGTTATATGTCTCCTGAATATGCATTAGAAGGTCTTTTTTCAATAAAATCAGATGTGTTTAGCTTTGGGGTCCTTTTGTTGGAGATAATTAGTGGCAAAAAGAATACAGGCTTCTATAACACAAACTCCCTCAATCTTCTTGGATATGCATGGGACCTATGGACAAGTGGGAGAGGAACAGAGCTGATGGATTCAACCTTAGAAGTTGCATCCATAAACAAAACGGTGGTGCGAAGATACGTGAACATAGCATTGCTTTGTGTTCAAGAAAGTGCAGAAGACAGACCGACCATGTCTGATGTTGTTTCAATGCTTGGGAATGAGAGTATAGCAATTCCTTTGCCTAAGCCTGTGGCTTTCCTAAATGTAAGGGGCATTATCAGGAGTTCAAGATCAGACGGAAGCTCAGCAGAAAATGTTTCTATCAATAACGTGACTGCCTCTGTTATGGAAGCTAGATGA 1986 0.4184 MSWSLTSWTGVEDPSPGNFSLEAIVSAEGKELIIKKESVIYWIGDELSNFTFQSSDNRDPAIWDGNSYLTWQGQGNYTSLVVLEVSGELNQQFWSQDTMQWVSLLSSKCGRYTSCGNFGICNPQATNPCECLQGFKGNKSTRCVRKTELCSSMSSDGFLRLDTVDFSSDTPLNFTAQNASTCRGDCSMNCSCVAYAYDVKGRCLLWFDRVLNLKNISVDVRADNSRLSFYLKLSPSDLIDKVSNNAGNNPDHKSNQIRKTLLTVVIVILFAALLIGALFAYYRRRRKLREQGEDLLSFDIGMSMKYQSSELGDVDKVGKVNKRDVKLPLFSFASVSAATNNFSPENKLGEGGFGPVYKGKLLNGDEVAVKRLSASSGQGWEELKNEAMLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDFFLFDATKRQILNWETRVRIIDGIAQGLLYLHQYSRFRIIHRDLKVSNILLDIDMNPKISDFGMARLFGGNELQANTTRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIISGKKNTGFYNTNSLNLLGYAWDLWTSGRGTELMDSTLEVASINKTVVRRYVNIALLCVQESAEDRPTMSDVVSMLGNESIAIPLPKPVAFLNVRGIIRSSRSDGSSAENVSINNVTASVMEAR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3337 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Acco01g3337 661 FunFam Uncharacterized protein 317 417 - -
Acco01g3337 661 ProSitePatterns EGF-like domain signature 2. 129 143 IPR000742 -
Acco01g3337 661 Pfam PAN-like domain 150 212 IPR003609 -
Acco01g3337 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 418 621 - -
Acco01g3337 661 CDD STKc_IRAK 348 613 - -
Acco01g3337 661 ProSiteProfiles PAN/Apple domain profile. 150 234 IPR003609 -
Acco01g3337 661 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 104 638 - -
Acco01g3337 661 Pfam S-locus glycoprotein domain 64 137 IPR000858 GO:0048544
Acco01g3337 661 SMART ntp_6 153 228 IPR003609 -
Acco01g3337 661 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3337 661 SMART serkin_6 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3337 661 Pfam Protein tyrosine and serine/threonine kinase 345 613 IPR001245 GO:0004672|GO:0006468
Acco01g3337 661 SUPERFAMILY Protein kinase-like (PK-like) 325 613 IPR011009 -
Acco01g3337 661 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Acco01g3337 661 CDD PAN_AP_plant 150 234 - -
Acco01g3337 661 Gene3D Phosphorylase Kinase; domain 1 317 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3337 Acco-ChrAcco01 50482120 50484769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3337 248 647 Receptor kinase-like Gene Family AT4G05200 48.642 1.29e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3337 PK_Tyr_Ser-Thr 3e-47 CL0016