Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3335 ATGGCCATCGATAATAGGTCACAGGCCAAGGCAGAGCCTAAAGCTCCTCAAATGGCAATATTTTACTCCGGGAAGGTGCTAGTGTTTGACGACTTTCCGCCGGAGAAGGCGACGGAGATCATGGAGCTAGCCTCCAAGTTAAGCTGTGATAATTTTGGGATCATCAAAACCCCCCCAAGTGCTTCTTTAGAAAATATGAATGAGGTTAAGGTGCCTCAAACAAGCGCGTCCCAAGAAGCTTCTAGTCCAGGCCCTCTCTCTTCTGGTTCAGGTATTTATCTATCACTTGTTGATCTGGATGAAAGTTTTTTGCGATCATTTTGA 324 0.4568 MAIDNRSQAKAEPKAPQMAIFYSGKVLVFDDFPPEKATEIMELASKLSCDNFGIIKTPPSASLENMNEVKVPQTSASQEASSPGPLSSGSGIYLSLVDLDESFLRSF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3335 107 MobiDBLite consensus disorder prediction 63 89 - -
Acco01g3335 107 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 81 IPR040390 -
Acco01g3335 107 MobiDBLite consensus disorder prediction 63 92 - -
Acco01g3335 107 ProSiteProfiles Tify domain profile. 11 46 IPR010399 -
Acco01g3335 107 SMART tify_2 11 46 IPR010399 -
Acco01g3335 107 Pfam tify domain 12 45 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3335 Acco-ChrAcco01 50469999 50470408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3335 10 87 Tify Gene Family AT1G19180 37.037 7.74e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco01g3335 tify 5.5e-16 No_clan