Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3320 ATGATGTTGTCGTCTTCGCCTTCAGCGATAGCGAGAAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGTTGAGAGGAGAAGAAGAGAAGCCGAAGGACTTGCCGCCAGCTTTGCCAGCTCGTCCGACGTCGAGAGCTCGGCGTCCCTCAGCGAGACGGTCGCTGCCTAATAAATTTAGGGTTGAAGGTGATCAGAATGCAACAATAAGCTCCAAGAATAATTCCAATGCAAAGGCAAAAGAGACCAAGAAGAAAGAAGAGGATGTGGGACATAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGACATGGAATCGCCTTATATCGTGACCTCGGAAGAGAATATGAGCCAACCATCATCAGAGGACCCTGTTTCAGCATCTACTGCTTCCATAGCAACATCGGGGAAGATTCAGGAGTTGGATGCTGATGACAATTTTGCTTATTACATAAAAGAGAAACTACGCGTTTGGTGTAGGGCGCCAAGTGGAAAGTGGGAGCTAGGACAGATACAATCAACTTCAGGAGAAGAAGCTTTTGTTTCGCTCTCAGGTGGAGATATTATAAAAGTGGCAAGATCAGAGCTTTTACCTGCTAATCCAGATATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCTGTTCTTCACAATCTGCGGTTTAGATATTCTCAGGACATGATATATAAGACTACAGATATTCCTCACGTTTATGCTATAGCAGATATGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATTATTATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAGTTTGCCATGCAATACTTAGCAGTTCTAAGTGGCGGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACGAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCAAGCAGATTTTCAAGAGTTGTTCAACTGGCCAATGGCGAGAGGTCATATCATATCTTTTATCAACTTTGTGCTGGTTCTTCTCCTGATCTTAAAGAGAGACTGAATCTTAAAGCTGCTAGTGAATATAAATATCTCAATCAAAGTGACTGCATGGCAATTGGTGGTATTAATGATGCTAAAAATTTTCATAAGCTAATGAAAGCAATGGATGATATTCGAATTTGCAAAGAGGATCAAGAGCAAGTCTTCAAGATGATTGCTGCAATACTGTGGCTGGGAAATATATCATTCCAAGTAACTGACAATGAAAATCACATTGAGGTTCTAAACGATGAAGCCGTTACCAATGCTGCCCTGCTACTGGGTTGCAGTTCCAAGGATTTGATGGTAACTTTATCTACTCGGAAAATCCAAGCTGGGAAAGATACCATTGCCAAAAAGTTGACATTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATGTATGCAGGATTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGCGGGTAAACGCTGCACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAACAGGATGACTATGAATTGGATGGCGTGGATTGGACAAAAGTAGAGTTTGAGGACAATCAAGAGTGCTTGGATCTTCTTGAGAAGAAACCTCTGGGGCTGATCTCTCTATTGGATGAGGAATCAAATTTCCCTAGGGCTACTGATGTAACATTCGCCAACAAACTTAGACAGCACCTGAATGCTAATCCCTGTTTCAAAGGGGAAAGAGGCAGAGCTTTTCGTGTTCGTCATTATGCGGGGGAGGTTTCCTATGACACAACTGGATTTCTAGAAAAGAACAGAGATCCTCTGCCTCCAGATTCCATTAAACTCCTGTCATCATGTATTTGTCAGCTGCCGCAGTTGTTCTCTAACCAGTCAAATTCCTCCCACGTAGGCGCATTGGGTTCACAAAAGCAGAGTGTTGGGACAAAGTTCAAGGGCCAATTATTCAAGCTGATGAATCAGTTGGAGGGCACCAAACCTCACTTTATTCGCTGCATAAAGCCCAATAACAAGCACCTTGCTGGAATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGATTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAAGGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGCCAGCGTATCACAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTCAATATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACAGGACAGCTTGGCGTCCTGGAGGATAGGAGGAAACATGTTATACTGGGAATACTTAGAGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTTTACGCCCTCAAGAACGGAGCAATAGCTTTACAATCATTTGTCCGCGGAGAGATTGCAAGAAAGACATATCATGAGATGAAGTCTGCTACATCTATTGCTTCTGACAAGCTTCAGCAGACCCAGGCAATCACACGTTTACAATCTGTGATCCGTGGTTGGCTGGTTCGAAGACGTGCTAGTAGTATCATTCATAAGTTGAAGAAAGCTAAACATAAGCAAAAGTCACGTTCTAAGATGTCAGAAATGAAGGATTTGTCCAAAGAGCAGGTTCAGAATCTGCCATCAACTTTGGCAGAAGTCCGGAACCGGGTTGTCAAAGCTGAAGCAACTCTGAAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTCGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAAAGTCTCTCAGTTGCTAGGAGGAGCCTTGCTGCTGAGAATTCCACCGATCAACCTGGAAGATACGATGCTGTGTCACCTTGCTTCTATGACTCAGAAGATGCCACTTCCATGGAATCCAGAACACCCACGGGCAGCACACCCATCAAATTTCCCAGCACTCCGTATGAGAATGGAGCAATGAGAGAGGCTAATGATACTTTCAATGCAGTCAGCAATCTGATGAAAGAATTTGAGCGGCGGAAGCAGACTTTTGATGATGATGCTAGAGCTCTACTTGCGGTTAGATCAGGGCAGCCTGCTCACATGAATCGCAACGAAGAACTCCGGCAGCTTAAACGCCGATTTGAAGGATGGAAGAAAGAATACAAGGGACGATTACGGGAAGCAAAAGCAAAGCTTTCCAAGACAGGGAGTCCAGAAGCCGAAATTAGTTGTCAAAGATGGTGGGGCAAGATAGGCTCAAGAGGACTATAG 3447 0.4311 MMLSSSPSAIARSSLEEMLESIRLRGEEEKPKDLPPALPARPTSRARRPSARRSLPNKFRVEGDQNATISSKNNSNAKAKETKKKEEDVGHKRKGSFASKKMKQDMESPYIVTSEENMSQPSSEDPVSASTASIATSGKIQELDADDNFAYYIKEKLRVWCRAPSGKWELGQIQSTSGEEAFVSLSGGDIIKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYKTTDIPHVYAIADMAFNEMMRDEVNQSIIISGESGSGKTETAKFAMQYLAVLSGGSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFSRVVQLANGERSYHIFYQLCAGSSPDLKERLNLKAASEYKYLNQSDCMAIGGINDAKNFHKLMKAMDDIRICKEDQEQVFKMIAAILWLGNISFQVTDNENHIEVLNDEAVTNAALLLGCSSKDLMVTLSTRKIQAGKDTIAKKLTLWQATDTRDGLAKFMYAGLFDWLVEQINKSLEAGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWTKVEFEDNQECLDLLEKKPLGLISLLDEESNFPRATDVTFANKLRQHLNANPCFKGERGRAFRVRHYAGEVSYDTTGFLEKNRDPLPPDSIKLLSSCICQLPQLFSNQSNSSHVGALGSQKQSVGTKFKGQLFKLMNQLEGTKPHFIRCIKPNNKHLAGIYDEDLVLQQLRCCGVLEIVRISRAGYPTRRMHQEFARRYGFLLSEASVSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQLGVLEDRRKHVILGILRVQKWLRGHQARRNFYALKNGAIALQSFVRGEIARKTYHEMKSATSIASDKLQQTQAITRLQSVIRGWLVRRRASSIIHKLKKAKHKQKSRSKMSEMKDLSKEQVQNLPSTLAEVRNRVVKAEATLKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQSLSVARRSLAAENSTDQPGRYDAVSPCFYDSEDATSMESRTPTGSTPIKFPSTPYENGAMREANDTFNAVSNLMKEFERRKQTFDDDARALLAVRSGQPAHMNRNEELRQLKRRFEGWKKEYKGRLREAKAKLSKTGSPEAEISCQRWWGKIGSRGL 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3320 1148 MobiDBLite consensus disorder prediction 21 106 - -
Acco01g3320 1148 Coils Coil 1051 1071 - -
Acco01g3320 1148 FunFam Myosin IE heavy chain 392 500 - -
Acco01g3320 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 867 IPR027417 -
Acco01g3320 1148 FunFam Unconventional myosin-XIX 523 705 - -
Acco01g3320 1148 Coils Coil 934 968 - -
Acco01g3320 1148 Pfam IQ calmodulin-binding motif 821 837 IPR000048 GO:0005515
Acco01g3320 1148 Pfam IQ calmodulin-binding motif 877 895 IPR000048 GO:0005515
Acco01g3320 1148 Pfam IQ calmodulin-binding motif 843 861 IPR000048 GO:0005515
Acco01g3320 1148 MobiDBLite consensus disorder prediction 61 76 - -
Acco01g3320 1148 FunFam Myosin heavy chain 335 391 - -
Acco01g3320 1148 PANTHER MYOSIN 200 1135 - -
Acco01g3320 1148 CDD MYSc_Myo8 221 803 IPR036022 -
Acco01g3320 1148 MobiDBLite consensus disorder prediction 77 101 - -
Acco01g3320 1148 Coils Coil 1092 1112 - -
Acco01g3320 1148 MobiDBLite consensus disorder prediction 114 133 - -
Acco01g3320 1148 MobiDBLite consensus disorder prediction 1025 1043 - -
Acco01g3320 1148 MobiDBLite consensus disorder prediction 1025 1048 - -
Acco01g3320 1148 ProSiteProfiles IQ motif profile. 840 868 IPR000048 GO:0005515
Acco01g3320 1148 SMART MYSc_2a 201 816 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 MobiDBLite consensus disorder prediction 21 35 - -
Acco01g3320 1148 Gene3D - 521 705 - -
Acco01g3320 1148 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Acco01g3320 1148 Gene3D Kinesin motor domain 326 744 IPR036961 -
Acco01g3320 1148 PRINTS Myosin heavy chain signature 262 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 PRINTS Myosin heavy chain signature 564 592 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 PRINTS Myosin heavy chain signature 511 539 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 Gene3D - 821 868 - -
Acco01g3320 1148 ProSiteProfiles Myosin motor domain profile. 243 815 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 Gene3D Kinesin motor domain 243 325 IPR036961 -
Acco01g3320 1148 Gene3D Kinesin motor domain 158 240 IPR036961 -
Acco01g3320 1148 Gene3D Myosin VI head, motor domain, U50 subdomain 396 683 - -
Acco01g3320 1148 Gene3D - 748 816 - -
Acco01g3320 1148 SMART iq_5 875 897 IPR000048 GO:0005515
Acco01g3320 1148 SMART iq_5 839 861 IPR000048 GO:0005515
Acco01g3320 1148 SMART iq_5 816 838 IPR000048 GO:0005515
Acco01g3320 1148 Pfam Myosin head (motor domain) 325 803 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco01g3320 1148 ProSiteProfiles IQ motif profile. 820 846 IPR000048 GO:0005515
Acco01g3320 1148 Gene3D - 335 394 - -
Acco01g3320 1148 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 154 203 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3320 Acco-ChrAcco01 50325308 50333579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3320 1 1144 Myosins gene family AT5G54280 58.124 0.0 1417