Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3300 ATGGAAAAAGCTCCTTCAATTCATCAAGAAGAAAGCGCCATCACCATTGTCCAAGTTTGTTTTGGTAGTAGTGGAGTGAGAGGGCGCAACCTTTTGGTGACGGTGTTATGTGAGAACAAAGGAGAAGATGGTGGTGGAAAATCTCAATGTTGTTCGAAAGTTTGCTTCCACTCTAGTGGTGGAGAAGACACTAGTGATGAAGAAGGCGGTGTCATGGAGAGCACCGACTCATCCACCGGTTCCCAGCAGCCGAACCTGCCCCCGGGATTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCAGTACCTCAAGAAGAAGGTGTCCTCGGCTCCCCTCCCCGTGGCCATCATCGCCGAGGTCGACCTCTACAAGTTCGACCCCTGGGAACTACCCGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCGGCCACATCAGGGTATTGGAAGGCGACGGGGACGGATAAACCCGTGTTCACATCCAATGGAAACCAAAAGGTGGGCGTCAAGAAAGCTTTGGTCTTTTACGGAGGCAAACCCCCGAGAGGCGTCAAAACCAATTGGATCATGCACGAGTATCGCCTCCTCGATAATAAGCCCAACAATAAGCCTCCTGGTTGTGACTTAGACAACAAGAAAAACTCTCTTCGGCTGGACGACTGGGTTCTGTGCCGAATATACAAGAAGACCAACACGCAGAGATCACCTATGGATCATGAAAGGGACGATTCGATGGATGATATAATTGGCGTTGGAGGGGTTCCTGCTTCGATCAACGTGGGCCAAATGAATGCGACGAGGTTTCACCTTTCCAAGATGTCCACGTTAAGCTATGGTGGAACCTCATTACTGGAGAATCATCACCATCATCATGACCAGAACTTGCTGGAAGGGGTTATATCAAGCACCAACAACAACAATAAGGAATCAGATCTTCAACTTCCCTTTGTGTCAACCATGACTGCTTCTACTGCCTCCAATTCTAACACCAAACGAACACTGTCGTCGCTGTATTGGGGCAATAATAACGAAGACGAGGACCTGAATGGCACCAAAAGGTTGAGTTTGGACGAGGATCCTCATCATCATCCTAATAACAATAACAATGAAGGTGGTAGTAATTCCATAGCTACCTTGCTTAACCAGATTCCTCAGACTCCTTCATTGCACCACCAGTCAATGCTTGGCTCATACCCATATTCAATACCTGGGATGAATTGGTATGCTTGA 1284 0.4938 MEKAPSIHQEESAITIVQVCFGSSGVRGRNLLVTVLCENKGEDGGGKSQCCSKVCFHSSGGEDTSDEEGGVMESTDSSTGSQQPNLPPGFRFHPTDEELVVQYLKKKVSSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVFTSNGNQKVGVKKALVFYGGKPPRGVKTNWIMHEYRLLDNKPNNKPPGCDLDNKKNSLRLDDWVLCRIYKKTNTQRSPMDHERDDSMDDIIGVGGVPASINVGQMNATRFHLSKMSTLSYGGTSLLENHHHHHDQNLLEGVISSTNNNNKESDLQLPFVSTMTASTASNSNTKRTLSSLYWGNNNEDEDLNGTKRLSLDEDPHHHPNNNNNEGGSNSIATLLNQIPQTPSLHHQSMLGSYPYSIPGMNWYA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3300 427 MobiDBLite consensus disorder prediction 71 86 - -
Acco01g3300 427 MobiDBLite consensus disorder prediction 367 383 - -
Acco01g3300 427 Gene3D NAC domain 95 252 IPR036093 GO:0003677|GO:0006355
Acco01g3300 427 MobiDBLite consensus disorder prediction 367 393 - -
Acco01g3300 427 SUPERFAMILY NAC domain 77 247 IPR036093 GO:0003677|GO:0006355
Acco01g3300 427 FunFam NAC transcription factor 56 95 252 - -
Acco01g3300 427 PANTHER NAC TRANSCRIPTION FACTOR 56 86 305 - -
Acco01g3300 427 MobiDBLite consensus disorder prediction 59 86 - -
Acco01g3300 427 Pfam No apical meristem (NAM) protein 87 213 IPR003441 GO:0003677|GO:0006355
Acco01g3300 427 ProSiteProfiles NAC domain profile. 86 247 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3300 Acco-ChrAcco01 50200050 50203294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3300 72 427 NAC Transcription Factor Family AT3G15510 51.064 5.51e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g3300 NAM 1.3e-39 No_clan