Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3299 ATGGGAGTGCCAGAGACAGACCCACTAGCTCAACTGAGTCTACCTCCGGGTTTTCGGTTTTTTCCGACCGACGAGGAGCTTCTGGTTCAGTATCTGTGCCGGCAGGTGGCCGGCCACCATTTCTCTCTGCAAATCATTGGTGAAATTGACTTGTACAAATTCGACCCATGGGTTCTTCCAAACAAAGCCATTTTCGGTGAGAAAGAATGGTACTTCTTCAGCCCGAGAGACCGAAAGTACCCAAACGGATCCCGACCCAACAGGGTCGCCGGGTCTGGGTACTGGAAAGCCACCGGAACCGACAAAGTCATCACCACCGCAGGTCGAAAGGTTGGCATAAAGAAAGCTCTCGTTTTCTATATTGGGAAAGCACCGAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTCGATTCCTCCCGAAAGAGCGGAAGCACCAAGCTCGATGATTGGGTTCTGTGTCGGATATATAAGAAGAACTCGAGCTCCCAGAAGACTACGCCGATGATGGTTCCAAGCAAAGAATCCGAATACAGCCACGGGTCGTCTTCGTCGTCGTCGTCCCACTTGGACGACATGCTGGGATCGTTGCCAGAAATCGACGACCGATGTTTCACGCTGCCACGTGTGAACTCGCTGAACACGTGGCAACAGGAGGAGAAGCTGAATCTTCAGAATCTGAATCTGAATGGTGGCAATAATTTCATGGAGTGGGCCAATCCGGCGATTCTGAACCCGGTGACGGAGTTCATTTCCGGGAATCAAACGCAGATCCAATCTCAATCTCAAGGGATGGTGAATTACAGTTCAATCAGCGACGTGCAACATGTGCCGTCGATCCCGCCGCTGACGGTGCCGGAGGAGGAGGTCCAGAGCGGAGTGAGTAGTTCGGGGTTTTATCAGCAGACTTCAAATGCGTTCACGCAGGGGTTCGGTAACTCAATGAATGACCAGTATGGATTCAGATACCCGAATCAGACAATGGGGTTCGGATTTAGACAATGA 1014 0.5148 MGVPETDPLAQLSLPPGFRFFPTDEELLVQYLCRQVAGHHFSLQIIGEIDLYKFDPWVLPNKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTAGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKSGSTKLDDWVLCRIYKKNSSSQKTTPMMVPSKESEYSHGSSSSSSSHLDDMLGSLPEIDDRCFTLPRVNSLNTWQQEEKLNLQNLNLNGGNNFMEWANPAILNPVTEFISGNQTQIQSQSQGMVNYSSISDVQHVPSIPPLTVPEEEVQSGVSSSGFYQQTSNAFTQGFGNSMNDQYGFRYPNQTMGFGFRQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3299 337 MobiDBLite consensus disorder prediction 167 195 - -
Acco01g3299 337 FunFam NAC domain-containing protein 72-like 23 167 - -
Acco01g3299 337 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Acco01g3299 337 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Acco01g3299 337 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Acco01g3299 337 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Acco01g3299 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3299 Acco-ChrAcco01 50178747 50179975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3299 1 337 NAC Transcription Factor Family AT4G27410 58.146 8.26e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g3299 NAM 5.7e-35 No_clan