Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3298 ATGAAGAAGCAAAACAGGAACTTGGAGCAGGAGATGAAGGACATAGAAGCTCAAACTAAGTTCAAAGCTCTTGATAGCTTTCAGAAGCAGAACCATCTTCCTCTCACTCTTAAGGTACATAATCTGTGCGTACAGTTTGAGGACGTGGTGTGCAAGATCAAGACCATGAAAGGTGGCTTATTCAACAAGAACACAGAATATGAAGAGAAAGTGATACTAAAAGGAGTGTCAGGGATAGTGGAACCAGGCGAAATGCTTGCAATGCTAGGACCATCTGGAAGTGGCAAAACAACACTCTTAAATGCATTAGGAGGCAGACTCAGAAGCAACACCAAAGTCCAAGGAACTATAACTTACAACAATGAACCCTTCTCAAACACAACCAAGAGAGACATGGGATTTGTCACCCAAGATGACATTCTCTACCCACACTTAACTGTCACTGAAACATTAGTCTTCACAGCCCTTCTCAGACTACCAAATACTCTCACAAAAAAAGAGAAAGTGTCATGTGCAGAAACTATGATAACCCAACTAGGGTTAACAAAGTGTAAGGATATCATAATAGGAGGGCCATTGGTGAGAGGAGTTTCAGGAGGAGAGAGGAAGAGGGTGAGTATTGGGCAAGAGATGTTGGTGAACCCTAGCTTGCTGTTTTTGGACGAGCCAACATCTGGACTTGACTCGACCATGGCTCAGAGGATTGTGTCCACTTTGTTGGAGATGGCTAATGATGGAAGGACCGTGGTTATGACCATTCACCAACCTTCAAGCAGATTGTACTACATATTTTGTAAGGTTTTGCTGTTGTCTGAAGGAAGCCCTTTGTTCTTTGGGAAGGGTTCTGATGCCATGCACTATTTTCTGAGTCTTGGATATGCCCCTACTTTTGGCATGAACCCTTCTGATTTCCTTTTGGATCTTGCAAGTGGTATTTATACTGATGAATCTGGTGAAGATCATGCCTCACTTAAGCAGACGTTGGTGTTAGCATACAGGCATAACCTTGAAGCACAAGTGAAGGAAATGGTTTGTGCAGTAAGTGATATAGGCAAAGGTGAAGGTAGATTTCAGGGCAGAGAGTTAGATGGATGGTCTACAACTTGGTTTCAGCAATTTAGTGTGTTGCTCAAAAGGGGAGTGAAGGAGAGAAGATATGAGTCGTTCTCTGGCCTCAAAGTTACTCAAATCGTCATGGCTGCCATTATTTCAGGAACTCTATGGTTTAAGTCTGACATTTCGCACTTGCAGGACCAAGTTGGTCTCCTATTCTTCTTAGGTAGTTTTTGGAGTTTCTTCCCATTTTTTGAAGCCATCTACACATTCCCACAAGAAAGGACAATGCTTGAGAAAGAAAGATCCTCTGGAGCATACAGGCTTTCCTCTTACTTCGTCTCAAGGTCTGTAGCTGACCTGCCCATGGAACTTGTTCTTCCCACAGTTTTTCTCATCATATGCTACTGGATGGCAGGCCTCAAACCCCATGCCCTGAACTTCTTATATACACTCTTCACCCTCTTAGTCTGTGTCCTGGTCTCACAAGGCCTCGGCTTTGCCCTCGGCGCAATTGTCATGGATCAAAGCTCTGTAACTTCACTTGGCTCCGTGGTTATGCTCACTTCCATACTAGCTGGTGGATACTATGTCCAACATGTCCCCAAATTTATTGCTTGGATCAAGTACTTTTCCATCAACTACTACACATACCAATTGTTTGTGGGGTCTCAGCATGAGAGTAAGGACACCTACCCTTGTTCTGAAGGGCAGTGTTTGGTTGCAGAATTTCCTCCCATAAAGCAAATAGGGCTGCATGTGAAGGACCAAGTGATTGCTGCTTCGGCACTGGTGATAATGCTGATAGGTTTTAGATTCATTGCTTACTTAGCTCTAATGAGGATTGGGGTGACTAAGAAACTTGTCTAG 1923 0.4363 MKKQNRNLEQEMKDIEAQTKFKALDSFQKQNHLPLTLKVHNLCVQFEDVVCKIKTMKGGLFNKNTEYEEKVILKGVSGIVEPGEMLAMLGPSGSGKTTLLNALGGRLRSNTKVQGTITYNNEPFSNTTKRDMGFVTQDDILYPHLTVTETLVFTALLRLPNTLTKKEKVSCAETMITQLGLTKCKDIIIGGPLVRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTMAQRIVSTLLEMANDGRTVVMTIHQPSSRLYYIFCKVLLLSEGSPLFFGKGSDAMHYFLSLGYAPTFGMNPSDFLLDLASGIYTDESGEDHASLKQTLVLAYRHNLEAQVKEMVCAVSDIGKGEGRFQGRELDGWSTTWFQQFSVLLKRGVKERRYESFSGLKVTQIVMAAIISGTLWFKSDISHLQDQVGLLFFLGSFWSFFPFFEAIYTFPQERTMLEKERSSGAYRLSSYFVSRSVADLPMELVLPTVFLIICYWMAGLKPHALNFLYTLFTLLVCVLVSQGLGFALGAIVMDQSSVTSLGSVVMLTSILAGGYYVQHVPKFIAWIKYFSINYYTYQLFVGSQHESKDTYPCSEGQCLVAEFPPIKQIGLHVKDQVIAASALVIMLIGFRFIAYLALMRIGVTKKLV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3298 640 Gene3D - 61 289 IPR027417 -
Acco01g3298 640 Pfam ABC-2 type transporter 371 575 IPR013525 GO:0016020|GO:0140359
Acco01g3298 640 FunFam ABC transporter G family member 22 60 291 - -
Acco01g3298 640 Pfam ABC-2 type transporter 254 331 IPR043926 GO:0140359
Acco01g3298 640 CDD ABCG_EPDR 70 279 - -
Acco01g3298 640 Pfam ABC transporter 73 225 IPR003439 GO:0005524
Acco01g3298 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 297 IPR003439 GO:0005524
Acco01g3298 640 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Acco01g3298 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 627 - -
Acco01g3298 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 288 IPR027417 -
Acco01g3298 640 SMART AAA_5 82 274 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3298 Acco-ChrAcco01 50167486 50170717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3298 80 258 Calmodulin-binding Proteins AT2G36910 28.042 9.54e-11 63.2