Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3258 ATGCTGGGAAATCACGACTTCAAGTTTCAACTTTCCTGTGATTTGCTAACTGTAGCATCCAATCATTGCTATAGTGGCGTCTTGGACTTCTCCAACTGGGTCGATGACCCGGCCCGAAAATTTCATGATCGACGGCTTAAACCCGCGAAAGCTTGGCTCCCTCCTTTCTCCCAATCTCATGTATGGGTGTATGAGTCTTTTGAAAGTTGCTCCTCAATCCTCATAATGGCGGACGCAGCAGGGTTGGCCGAGGCAGCAGGATCAAGATTCACTTCACTGGAGCTAATTGGGCAGGGATCATTTGGGGACGTTTATAAAGGCTTTGACAAGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATTGAAGATATTCAAAAGGAAATTTCTGTTCTGCAACAATGTCGATCTTTATATATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGACCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTAGCATTCTACGGGACTTGTTGCATGCAATTGATTACTTACACAGTGAAGGAAAAATCCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGAGTTTCTGCTCAGTTAACGAGGACTATATCAAGAAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCCGAGGTCATTCAAAATTCAGACGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCAATTGAGATGGCGAAGGGGGAACCTCCGCTTGCTGATCTTCACCCAATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCACCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTTGTGTCTTTGTGTCTAAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCAAGGAAAAGCCCCAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAATCAAAACCTAGAAATGACCCACAAGGGACAGGGGAGGGATCTGATACTATGAGGGTGGTAAGAGATGTAAGAGGTGAAGAAGCTCAAAGGCCAAGTGCTCAGGGTAAAAGCGTGAAAAATACTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACAGTTCGCAGTTCACGTCCACCTCATAGTCCCATAACTGCTGTTAATCAAAGAAAAACTTCAGAGAGTGGCCATCAAGTGGCATCTTCCTACAGAAGTAGACTTACTGAATCTTCAGAAACTACCTCCGGAAAAGATGTTAGGGCTCCTTATCATGATGAGCGCAAGGGCAATCACCTGGATGATGATGAATTTTCGGGCAATGAATCAGGAACTGTTGTCATTCGATCTCCTAAAGGATCACAGCCATCATTGAGTCGTGAGCATAGCTCTCTGTCTAGCAGCAGCTTTTTCTCTCTTGAAGATGCTTCTACCAGTGGAACTATTGTTTTCCATGGTCAGCATGATGATTCTGATTTGCAGACAACAAGATCCCGATTGGGTCTTCAGGAGAGAACTTCAAATGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCAAAAGCTGCCATGCAAGTAGGACGGAAAAGGAATGCCCGAGACAGATTTGTGGTGGGAAAGGTTGATAATGATTCACAAGAAGGCAGGAGAGACCAAGCAGCAGGCAGCCCCGATTCTTCCAGATCATCTCGTGATTATGTGGACGCTCAAAAGGGAATTTCAAGATCTCACCGTCTTAGGGATGATGTAGAAAGTGCCAAAATAATGTCATCCTCTGTACCATTATCAAACTTGCTTATTCCTTCGGTGAAAGAGGCTATTGCTAATGATCCGGAAGGCTCAATTGTAGAAGTCATAAATTCACTTGTCAGCATGGAGCAGGCAAATCCAAAATCCTGTGATGTTCTTGTCAAGAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTGCAGGAGCTGGCAGGTGACTTATTCAGCAAGTCAGCTCCAGAAGAAACTCAAAACACAAGCGCGGCAACTGATGACCGGAGGAAACTGCAGAACAAAGACACCCATTCACAAAGCAATTTAAGCCCACTCGCAAAATTCCTTCTCTCCAGATGGCAAGGTCAAGTCTCAAGGGATCTAAATCCAACTTAA 2301 0.4411 MLGNHDFKFQLSCDLLTVASNHCYSGVLDFSNWVDDPARKFHDRRLKPAKAWLPPFSQSHVWVYESFESCSSILIMADAAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRSLYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIASILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQSKPRNDPQGTGEGSDTMRVVRDVRGEEAQRPSAQGKSVKNTGWDFSIGGSQGTGTVRSSRPPHSPITAVNQRKTSESGHQVASSYRSRLTESSETTSGKDVRAPYHDERKGNHLDDDEFSGNESGTVVIRSPKGSQPSLSREHSSLSSSSFFSLEDASTSGTIVFHGQHDDSDLQTTRSRLGLQERTSNAFLEDSAANLAEAKAAMQVGRKRNARDRFVVGKVDNDSQEGRRDQAAGSPDSSRSSRDYVDAQKGISRSHRLRDDVESAKIMSSSVPLSNLLIPSVKEAIANDPEGSIVEVINSLVSMEQANPKSCDVLVKKLLQRLASSKESSLKELQELAGDLFSKSAPEETQNTSAATDDRRKLQNKDTHSQSNLSPLAKFLLSRWQGQVSRDLNPT 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3258 766 MobiDBLite consensus disorder prediction 351 372 - -
Acco01g3258 766 Coils Coil 116 143 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 467 487 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 400 466 - -
Acco01g3258 766 FunFam serine/threonine-protein kinase dst1 isoform X1 87 375 - -
Acco01g3258 766 CDD STKc_MST3_like 88 362 - -
Acco01g3258 766 SUPERFAMILY Protein kinase-like (PK-like) 87 428 IPR011009 -
Acco01g3258 766 Coils Coil 687 707 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 712 745 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 491 519 - -
Acco01g3258 766 ProSiteProfiles Protein kinase domain profile. 90 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3258 766 Gene3D Transferase(Phosphotransferase) domain 1 87 378 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 351 519 - -
Acco01g3258 766 SMART serkin_6 90 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3258 766 Pfam Protein kinase domain 91 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3258 766 MobiDBLite consensus disorder prediction 584 624 - -
Acco01g3258 766 MobiDBLite consensus disorder prediction 584 600 - -
Acco01g3258 766 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 85 714 - -
Acco01g3258 766 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3258 Acco-ChrAcco01 49845135 49853857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3258 76 763 MAP Kinase Kinase Kinase Kinase AT3G15220 62.767 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Acco01g3258 Pkinase 1.6e-68 CL0016