Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3247 ATGCGATTATCGTCCGCTTCCGGTTTGTCATTGGACCAGACGAGACTTGATCGATCGGGGTTGCGGCTTCGGAAGAAGCACAAGAGGCTAGACTCAATATGCGAAAAGGAATATAATCGGAACCATAGTGAATTGAATGAGGATGGTGATGGGGCTGGTACTTTGGGCGCTGATACTGAGCTACGCCGCAGCTCTAGGGTTCGGCGAGCCCCAGTTGTACTCGATGCCTCTCCTCCTCCCCTTAAGAAACGGCGGAAGTTAGGTAAGAATGTAATGCTGAGGAGTGTGAGCAATGTCAAGAGCCCAGGACATGTGAATCAGAGTCCTGGTGGTATAGAGCGTCCGGGTACATGGAGTTTAAGGTTGAGATCCCGGGGTAAAAATGTAGGTTTCACGGTGAAGGGGGAGAGGGAACCACCGAGTAGTAAAAGGAAGCTGTTTGAGGATATGGACGAAAGCAGGGGCAATGGAAAACCAGAGGTTGCAGAGACGAATAAGAAAGAGGAATTAGAAGGTGGAATGCCAAAGGTTGTTAAGTCAAAAAGACCAGGGAGGATCAAAGCAACAAAACATGCGGAAGAGCATGAACATAATGAGTCCCATGGGAACTCAGATGAGAGCAAGAGTCAAGAAATGGAGCTTATTCTGAACCAAGATGGGGAGAACGCTTCAATTTCAGGATCTAAATTGCCTGATGAGGATGTAGTGGAAATAGTGGATGGGAATGCCTCTCCAAATATAGTGACTAGCGAGAGAAAAATTTGTGATAATTTGCAGTCACAGGAGTCTAATGGTAATGTTGAATTGCCCCCAGGGGAACATGTAGAAAAACCAGTTGATCAACTGGAGTGTGTGAATGAAGGTGAAAATGGAAGAGATGCTGTAGAAATTGTTGAGAATATGACCAAGCAAGTAGAAAATGAAGGATCTATCAATATGGAATCTGCAGTTGACGAAAAGACCTTGCAAGATGAAAATATTATAAAAGTAGACAAGCCCAAACAAGCTTCAAATGACATAACTGACCAACCAAGGATTAAAGAAGGCAGAAGGTGTGGTTTGTGTGGTGGAGGGACTGATGGTAAACCTCCAAAAAGGTTGGTTCTAGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCTTCAGCATCTGAGGAGCCTAATTATGATCCTTGGGATGGTTTTGGTGATGAATCTGGCTGGCTTGGGCGTCTCTTAGGTCCTATTAACGATCGCCATGGTATTGCCAGGATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTATACTTTGCTGGCTTGGGATGCTTAAGAAATGTGAGGGCTGCCCTCTACAGAGGAAGGGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCTACCATTGGTTGTCGGGTTGATCGGTGTCCAAAGACGTATCACTTGCCTTGTGCAAGAGCAAATGGTTGCATCTTTGACCATCGCAAATTTCTTATAGCCTGCACAGATCATAGGCATTTCTTTCAACCTCAGGGCAATCAATATATAGCACGGATAAAGAAATTGAAAGCTAGAAAGATGAAGTTGGAGATGAGAAAGCTTTCAAATGATGCTTGGAGAAAGGATATTGAAGCTGAAGAAAAATGGTTGGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAATAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTATATACATTGGTGGTCCTGACTCTGATGGTGAAAGATCATTTCAGGGTTGGGAATCTGTTGCCGGGCTTAAGGATGTCATCAGTTGCATGAAAGAAGTTGTTATTTTGCCTCTGCTCTATCCTGAGTTCTTTGATAATTTAGGTCTTACACCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGCAAAACTTTAGTGGTCAGAGCTTTGATAGGTGCGTGTGCTCATGGTGATAAACGGATTGCATATTTTGCTCGCAAAGGTGCGGATTGCTTGGGGAAATATGTGGGTGATGCTGAACGCCAACTGAGACTACTATTTCAGGTTGCTGAAAAATGTCAACCTTCGATAATATTCTTTGATGAGATAGATGGATTAGCCCCAAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACACTGCTTGCTCTATTGGATGGTTTGAAATGTAGGGGTTCAGTTGTAGTTATTGGTGCAACAAATCGTCCTGATGCTGTTGACCCAGCGCTTAGGCGTCCTGGAAGATTTGATCGGGAGATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCTCTTCACACGCAGAGGTGGCCAAAACCAATCACTGGATCCTTACTTGAGTGGATTGCAAAAAAGACTCCTGGATTTGCCGGTGCAGATCTCCAGGCTCTCTGTACCCAAGCTGCCATCAATGCTTTGAAGAGAAACTTTCCTTTGCAAGAAGTTCTGTCTACAGCTTCAGAGGAAGACTCTGGTGGTAAGCGCCTTCCTCTTCCATCCTTTGCAGTGGAGGAAAGGGACTGGTTGGAGGCTTTATCATGTGCACCGCCGCCATGCTCCCGGAGAGAAGCTGGGACTGCTGCAAATGACATAGTGTGCGCCCCTCTTCCCACCCACCTTATACCTTGTTTGTTGCAACCATTATGCACTCTGCTTGTTTCTCTGCATCTTGATGGACGCCCATGGTTGCCGCCTCCTATGTTTAAATCTGTAACAAGGATTAAAAGCGCTATTATTTCTGCTCTGGACAAAAAGAAAATGTCTATTGATCAGTGGTGGTTGCATGTTGACGATTTTCTTCAGGACACAGATTTTGCTGCCAATTTAGGGAGGAAACTCACCTGTGCTGGCATTTTATCTGCAAATGATGGTCAAGCTGGTTCTTGTGATCTCGTAGATGCTACTGATGGCGATGTGAAACTTGAACCTCCTATAAAGCACCATGTCCGTACAGGTAGTGGTTTATTGTCAAGTATGTCATTTATGGTGTTGAAGAAATCAGGATTTCGTATATTGATTGCTGGAAATCCCAAATCTGGTCAGAGGCATCTTGCTTCCTGCCTTCTTTACTGCTTTGTTGGTAATGTTGAAATTCAGAAGATTGATATGGCAACTATTTCACAAGAAGGACAAGGAGACGTGGTACAAGGGATTTCACAAATATTAATGAAATGTGCTGGTGTGCAATCATGTGTAGTCTTCATGCCAAGAATTGATCTGTGGGCTGTGGAGACTCATTTTCAGGTTGATGAAAATTCTGATCACTGCTCCACTAATAATCAAGTTTCTGAGATAGAAGAGTCTTGTTTAACACCAAGTGAGGTTGTTGAAAAGAAAAGTGAATTCAATTCAAAGAAAAGGAAATCTGTAGATATGGCCAAAGGTCAAGTCATCTTAAGGGCTTCCCATGCGTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTGTCTGCATCCTTGATGATTCTGGCTACATCAGATGTTCCATATCCAGAACTTCCATGTAAAGTAAGCGAGTTCTTTAGGAGTTACCAATCAAGCTGCAGCCAGTCTGCTTCCTTGGTGCAGACAGTGCCTCGTTTTTCTGTGCAGATTAAGGGGAACTTCAATCATGATGTTATGATCAATCTATCCACAGTGCAGCTAATGAGAAATATTATTGAGCAGCTGGTTCAATTGGTCCACAAAAAATCTCATATGCATATTGGAGCCTATGATTCAGTTCAAGGTTGTAAGGATAGGGCTTGTCTGGGAAAAGATAATGAATCAGGCAATGGTAATGAGGTTAAAGTCCAACTTCCTGAACCCTCTACTAAAGTTCCATCACCACCTAGCAGTAAGCCACTGAAGCAAAAGTCAACCCTGTTGTTGGCAATATCAACCTTTGGTTATCAAATTATTCGGTTCCCTCATTTTGCAGAACTTTGTTGGGTCACATCAAAACTCGAAGAAGGTCCTTCTGCTGATGTAAGTGGACCTTGGAAGGGTTGGCCTTTCAACTCCTGCATAATTCGCCCTATTACCCTGCAAGACAAGGTGGCTACTTCTTGCAGCTCTAGCAATATTAAAAACAAAGAAAAATCTGGTATTGTCAGGGGCCTGGTGGCTGTTGGTTTATCAGCATACAGAGGAGCTTATACGTCTGTCAGGGAAGTTTCTAGTGAGGTACGCAAGGTTCTTGAAATATTAGTTGGAAAAATCAACACAAAAGTTCAGGCTGGTAAAGATAGATATCAATTTCTTCGTATTCTATCGCAAGTGGCTTATTTGGAAGATATGGTCAATAACTGGGCCTATGCATTGTTAAGTCTTGAGCAGGACTCCCCGGACCTGGCTGCAAAACTTACATGGACTAGTGTCGGGTCATTAAACAGACATGAAAACCAACAAGTTGAAGATGAGGGTTTCCAGTTGGTTGCCCCCATGGAAAGTCATGAGCCAGAGAAGCTGGAGGGAAGTCCCAATGCAAATGCTGCCAAGACGCCTGAATCTCTTCCGTTGAATAACAGAAATGATGATGTGGATAAAGTCGATCATGATGGCAAAGTTTCAGAAGGATCACCACAAAATAGTTCTTTTTCAGATGATCATATTAGCAACTCTGCTGCCAGGAGCCAGCCCGTTGATCCGGTTACAATTGTGGAGAATGGCAGACTATCTAAAGTATCTGAATCAGGAACAACTGGAACTCCTGAAATGATAAATGGAGAAATTGGGCCCTCAAAAGGCCCAAATGGATCTTCACTAACTCACACTGTCTCTCTTTCTGGAAATGAAGAGTTTAGATTGTCAAAAGGCTTAAATGGATCAACAACTACCCATTCTGTTGCCTTTTCTGGTAATGAACTTCCCAATGCCTGCCAACCAGAGGGTGTTGAGATTGAAGACTCCAGGATAGCCCCTATTACTGTTCCCAGCTTGTCGTCATCAGAGACTGATATTAAATTAAGGGGTGGTGACTCTGATGTAGATGCCAATGCTGTAGAAATTAGTAAATCTCCGAGTAAAAGCAGTGATCGTGCTGAATCTGGGGTTGTCTGTTTTTACCAATGTTGCCCTGGATGCCTTGACACTCTTTATCATTTGACACGCAAAATCATTGTTCACAGGTGTAGCTTGAATGGAAGCGATTGGGCTGTCGAAGATGTCCATGATGTTCTTGCATCACTGTCTGTGGATCTTATTTCAGCGGTTAAAAAACTTTATTCTGCTGAAGATTTGAATGACTTATCTGATAAAACCTCTCAGGCGCAGTCTGAAGGGCCTCTTGATTGTTCAGACTCGAGAATGTGTATCCCCAGAAATCTAGACAGGGTTTTTTTGCCAGCCGAATGTATGTCTCACTCCACAAGCCAACATACAGCTGGAGGCAAAGATACGGCATCGAATGAACTGAAGCTTGATTTAAAATGTGTTTTCAGAGATGGTGTACTGGTTCAAATGGACCCTGATAAAGAAGTCTCTCTTCACTGTAAATTTGAGACCTTGTGCCTTTGTTCTTTTAGAGAGTTGATAGTAATGACGAAGCACCCTTTTGGCTGA 5571 0.4353 MRLSSASGLSLDQTRLDRSGLRLRKKHKRLDSICEKEYNRNHSELNEDGDGAGTLGADTELRRSSRVRRAPVVLDASPPPLKKRRKLGKNVMLRSVSNVKSPGHVNQSPGGIERPGTWSLRLRSRGKNVGFTVKGEREPPSSKRKLFEDMDESRGNGKPEVAETNKKEELEGGMPKVVKSKRPGRIKATKHAEEHEHNESHGNSDESKSQEMELILNQDGENASISGSKLPDEDVVEIVDGNASPNIVTSERKICDNLQSQESNGNVELPPGEHVEKPVDQLECVNEGENGRDAVEIVENMTKQVENEGSINMESAVDEKTLQDENIIKVDKPKQASNDITDQPRIKEGRRCGLCGGGTDGKPPKRLVLDNGESENEAYSGSSASEEPNYDPWDGFGDESGWLGRLLGPINDRHGIARIWVHQHCAVWSPEVYFAGLGCLRNVRAALYRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHFFQPQGNQYIARIKKLKARKMKLEMRKLSNDAWRKDIEAEEKWLENCGEDEEFLKRENKRLHRDLLRIAPIYIGGPDSDGERSFQGWESVAGLKDVISCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACAHGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALLDGLKCRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQRWPKPITGSLLEWIAKKTPGFAGADLQALCTQAAINALKRNFPLQEVLSTASEEDSGGKRLPLPSFAVEERDWLEALSCAPPPCSRREAGTAANDIVCAPLPTHLIPCLLQPLCTLLVSLHLDGRPWLPPPMFKSVTRIKSAIISALDKKKMSIDQWWLHVDDFLQDTDFAANLGRKLTCAGILSANDGQAGSCDLVDATDGDVKLEPPIKHHVRTGSGLLSSMSFMVLKKSGFRILIAGNPKSGQRHLASCLLYCFVGNVEIQKIDMATISQEGQGDVVQGISQILMKCAGVQSCVVFMPRIDLWAVETHFQVDENSDHCSTNNQVSEIEESCLTPSEVVEKKSEFNSKKRKSVDMAKGQVILRASHAWMSFIEQVESIGVSASLMILATSDVPYPELPCKVSEFFRSYQSSCSQSASLVQTVPRFSVQIKGNFNHDVMINLSTVQLMRNIIEQLVQLVHKKSHMHIGAYDSVQGCKDRACLGKDNESGNGNEVKVQLPEPSTKVPSPPSSKPLKQKSTLLLAISTFGYQIIRFPHFAELCWVTSKLEEGPSADVSGPWKGWPFNSCIIRPITLQDKVATSCSSSNIKNKEKSGIVRGLVAVGLSAYRGAYTSVREVSSEVRKVLEILVGKINTKVQAGKDRYQFLRILSQVAYLEDMVNNWAYALLSLEQDSPDLAAKLTWTSVGSLNRHENQQVEDEGFQLVAPMESHEPEKLEGSPNANAAKTPESLPLNNRNDDVDKVDHDGKVSEGSPQNSSFSDDHISNSAARSQPVDPVTIVENGRLSKVSESGTTGTPEMINGEIGPSKGPNGSSLTHTVSLSGNEEFRLSKGLNGSTTTHSVAFSGNELPNACQPEGVEIEDSRIAPITVPSLSSSETDIKLRGGDSDVDANAVEISKSPSKSSDRAESGVVCFYQCCPGCLDTLYHLTRKIIVHRCSLNGSDWAVEDVHDVLASLSVDLISAVKKLYSAEDLNDLSDKTSQAQSEGPLDCSDSRMCIPRNLDRVFLPAECMSHSTSQHTAGGKDTASNELKLDLKCVFRDGVLVQMDPDKEVSLHCKFETLCLCSFRELIVMTKHPFG 1856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3247 1856 MobiDBLite consensus disorder prediction 363 391 - -
Acco01g3247 1856 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 763 855 - -
Acco01g3247 1856 Pfam ATPase family associated with various cellular activities (AAA) 627 762 IPR003959 GO:0005524|GO:0016887
Acco01g3247 1856 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 347 503 - -
Acco01g3247 1856 Pfam AAA+ lid domain 788 820 IPR041569 -
Acco01g3247 1856 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 398 503 IPR013083 -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1 23 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1512 1526 - -
Acco01g3247 1856 FunFam ATPase family, AAA domain-containing 2 586 769 - -
Acco01g3247 1856 Gene3D - 589 863 IPR027417 -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1561 1577 - -
Acco01g3247 1856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 854 IPR027417 -
Acco01g3247 1856 PANTHER AAA DOMAIN-CONTAINING 25 1758 IPR045199 -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1265 1292 - -
Acco01g3247 1856 ProSiteProfiles Extended PHD (ePHD) domain profile. 391 501 IPR034732 -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1487 1595 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 99 229 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 209 225 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 137 178 - -
Acco01g3247 1856 ProSitePatterns AAA-protein family signature. 732 750 IPR003960 GO:0005524|GO:0016887
Acco01g3247 1856 MobiDBLite consensus disorder prediction 1527 1550 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 40 66 - -
Acco01g3247 1856 SMART AAA_5 623 764 IPR003593 GO:0016887
Acco01g3247 1856 Gene3D - 763 855 - -
Acco01g3247 1856 MobiDBLite consensus disorder prediction 187 208 - -
Acco01g3247 1856 Pfam PHD-like zinc-binding domain 422 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3247 Acco-ChrAcco01 49760897 49768570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3247 589 824 Calmodulin-binding Proteins AT3G56690 41.176 5.51e-45 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3247 01 49760897 49768570 Acco01g3247 01 49760897 49768570 ECH