Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3242 ATGGGGGGCGAACTCAGGAAGAAACCGAAGCCCGCGCAGCTTAATCCCAACTGGATTCAGCTCCAACAAAAGCTTAAAATTCGCGGCTCTGATGCTTCAAGACCCTTCAAACACTCAGGAATTGAGACTCCAAAATCAGTATTGGGAAAGCGGAAAGAGAGGCAAGATGCAGAGTCCAATGATTGTCAGATTAATCCTCTTACTCCTATAAATGATGATTCCAGTCTGACTGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTAGGTCAAGGAAACAGAAGCGCTCTTGGAAGAGTAACACTGGTTAATAGGTGGGGAAATGTTATTTATGATGAATTTGTTAGACCAGTGGAGCGTGTTGTTGACTTCCGCACCAAAATTAGTGGCATAAGACCTCGGAACTTGAGAAGAGCGAAGGATTTTATGGCCGTTCAGAAGAAAGTGGCAGAGTTGATCAAAGGCAGGATCCTTGTGGGACATGCCCTGCACAATGACCTTAAGGCATTATTATTAAGTCATCCCAAGAAGGATATTCGGGATACCTCTGAGTACCAACCATTTCTAAAATCACATAGCAGAAGGGCACTTCGACATCTTGCTGCCGAACATCTTGGTGCTAAGATCCAAACTGGGGAGCACTGCCCTATAGATGATGCTCGTGCTGCTATGTTGCTTTATCAAAGGAATAGAAAAGAATGGGAGAAGAGTGTGAAAGATCAATTCCGACTTAAACAGAAGCAGAAAAAACGGAGGCCCAAGAAGAAGCAAAAGAAGGAAGTTTCTCCAGATGGGAATGCCGAGGGAGGTGCCTCATAG 819 0.4493 MGGELRKKPKPAQLNPNWIQLQQKLKIRGSDASRPFKHSGIETPKSVLGKRKERQDAESNDCQINPLTPINDDSSLTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNVIYDEFVRPVERVVDFRTKISGIRPRNLRRAKDFMAVQKKVAELIKGRILVGHALHNDLKALLLSHPKKDIRDTSEYQPFLKSHSRRALRHLAAEHLGAKIQTGEHCPIDDARAAMLLYQRNRKEWEKSVKDQFRLKQKQKKRRPKKKQKKEVSPDGNAEGGAS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3242 272 Pfam Exonuclease 80 227 IPR013520 -
Acco01g3242 272 SUPERFAMILY Ribonuclease H-like 79 228 IPR012337 -
Acco01g3242 272 Gene3D - 75 254 IPR036397 GO:0003676
Acco01g3242 272 MobiDBLite consensus disorder prediction 44 59 - -
Acco01g3242 272 MobiDBLite consensus disorder prediction 235 272 - -
Acco01g3242 272 MobiDBLite consensus disorder prediction 29 69 - -
Acco01g3242 272 FunFam Interferon-stimulated exonuclease gene 20 75 246 - -
Acco01g3242 272 MobiDBLite consensus disorder prediction 243 257 - -
Acco01g3242 272 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 43 248 IPR047021 GO:0004527
Acco01g3242 272 SMART exoiiiendus 78 236 IPR013520 -
Acco01g3242 272 CDD REX4_like 80 228 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3242 Acco-ChrAcco01 49736114 49739254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3242 79 236 C2H2 Transcription Factor Family AT3G27970 36.782 2.22e-28 109