Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3233 ATGGCACAGTTACCTCCCAAAATACCCAATATCCCACAAAATTGGCCTCCATTTCCACATCACAAGATGTCAGCTATGGCTAATTTCAATCCTACCAACACCACTCAACAACAACAATATCATCACAGCCATCATGAGCAAGAACAGCAACAAAATTCTTCACAACAGTTACCTTCCTGGGTCGATGAATTCCTTGACTTTTCGTCAGCACGGCGTGGTGCTCACCGGCGATCAGCGAGCGACTCCATTGCTTTCCTGGAGGAATACCGTAGCTCCGGCACCGTCGCGGGAGCCCATGGATTCGACAGGTTGGACGAGGAGCAGCTTATGTCGATGTTCTCCGACGACATTGCGTCCGGTGGCTTACCCCCGCAGTTGTCGAACCCTTCCACGCCGTCCGATCAAAATAGCAACAATAATGAGAAGCCAATGGTATTAGACGAAGTGGTCCCAGTTAAAGAGAATCAGCAGCAGCCGCCGCCGCCAAATAATACTGACCAAGGGGAGGTGGAGAGCTCATGCAAAAACGAAACAGCATCACCACCGTCGTCCGTCGCCCCTAGCAGCGTCGAAACTGTCGCCGATCCCAAAAGGGTCAAACGAATATTGGCGAACAGGCAATCAGCTCAGAGGTCAAGAGTGAGAAAGCTACAATACATTTCTGATCTGGAGAAGAGCGTGACGACATTGCAGACGGAGGTGTCAGCGCTGTCGCCACGTGTAGCATTCTTGGACCACCAGCGTTTGGTTCTCAACATCGATAACAGTGCCTTGAAACAACGAATCGCTGCTTTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCATTAAAGAAGGAGATAGAGAGACTAAGGCAGGTATATGAGCAACAGAAGCTGCAGAAGAGAGGGAACTCAGTGAACAACAACAACATCATGAATGGCAATTCATTGCCCTTTATTGAGAAGGAACAGCTCCTCAGTTGA 972 0.4918 MAQLPPKIPNIPQNWPPFPHHKMSAMANFNPTNTTQQQQYHHSHHEQEQQQNSSQQLPSWVDEFLDFSSARRGAHRRSASDSIAFLEEYRSSGTVAGAHGFDRLDEEQLMSMFSDDIASGGLPPQLSNPSTPSDQNSNNNEKPMVLDEVVPVKENQQQPPPPNNTDQGEVESSCKNETASPPSSVAPSSVETVADPKRVKRILANRQSAQRSRVRKLQYISDLEKSVTTLQTEVSALSPRVAFLDHQRLVLNIDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQVYEQQKLQKRGNSVNNNNIMNGNSLPFIEKEQLLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3233 323 Coils Coil 272 296 - -
Acco01g3233 323 MobiDBLite consensus disorder prediction 153 193 - -
Acco01g3233 323 Pfam bZIP transcription factor 197 241 IPR004827 GO:0003700|GO:0006355
Acco01g3233 323 SUPERFAMILY Leucine zipper domain 197 251 IPR046347 GO:0003700|GO:0006355
Acco01g3233 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 247 IPR004827 GO:0003700|GO:0006355
Acco01g3233 323 FunFam Basic leucine zipper 61 196 269 - -
Acco01g3233 323 MobiDBLite consensus disorder prediction 26 40 - -
Acco01g3233 323 CDD bZIP_plant_RF2 198 248 IPR044759 GO:0003700|GO:0006355
Acco01g3233 323 MobiDBLite consensus disorder prediction 1 56 - -
Acco01g3233 323 Gene3D - 196 248 - -
Acco01g3233 323 MobiDBLite consensus disorder prediction 1 16 - -
Acco01g3233 323 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Acco01g3233 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Acco01g3233 323 MobiDBLite consensus disorder prediction 121 141 - -
Acco01g3233 323 MobiDBLite consensus disorder prediction 115 141 - -
Acco01g3233 323 PANTHER BASIC LEUCINE ZIPPER 34 1 306 - -
Acco01g3233 323 MobiDBLite consensus disorder prediction 159 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3233 Acco-ChrAcco01 49685591 49688485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3233 1 274 bZIP Transcription Factor Family AT3G58120 50.482 7.83e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g3233 bZIP_1 2.5e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3233 01 49685591 49688485 Acco01g3233 01 49685591 49688485 ECH