Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3221 ATGGGATCACCATTTGAGCCAGTTTCATTTCCCAGGAAAAACCCATATAGAATAGAAACCAAGAACTTATCATGCAGATTGTTCGGCCAGCTTGATGAGTTGAGAAGCCTGTGTTTTGGTTCAAGTCAATGGAACAGTGCTAAGCTGATCTTAAAAGATGTGAATTGTGAGGCAAAACCTGGAGAACTTACCGTTATTGCTGGTCCTAGTGGAGCTGGAAAGACCACACTGCTAGAGATTCTTGCAGGGAGAGCATCCCTATGTGAGGTTTCAGGGCAAGTGCTAGTCAATCACAGGCCTATGGATTTGAAGCAATTTAGAAGAACATCTGGGTATGTCACACAAGAAGATACATTGTTCCCATCGCTTACTGTTAGAGAAACGCTCATGTATAGTGCACTTCTGAGGCTTCCTGGAGGGAGAAAAGTAGCTGCTGCAAGAGTTGCCGGGTTGATGAAGGAGCTTGGGTTGGATCAGATAGCAGATTCAAGAATTGGCACTGGTCGTGGCGGATCATCAGATCAAGGTATATCGGGTGGGGAAAGGCGAAGAGTCTCCATTGGAGTCGATTTGGTTCATGACCCTGCTGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCTCTTAACATAGTCTCATTGCTTAGATTAATGGCATTTAATCAAGGTAAGACTATTGTTTTAACCATTCACCAACCTGGGTTTCGGATTTTACAGCTAGTTGATCATCTTGTTCTGCTTTCGGATGGATTCGTCATCCATAACGGGTCGCTGAATCTTCTTGAGGCTAGGCTCAAGTTGGCTGGGCATCATATTCCCCACCATGTCAATGTCCTTGAATTTTCCCTTGATGTCATGGGAAGCTTGGTGATACAAACTTCAGAATCTAGGAACAATCAGCTTCTTCTCAGAGAGAGAGAGGAGCAAGTTTGTAAAATGAGGATGCCGTGCTCAATGAATAATGTCAGAGAAAAGGCTGTTCATTACTCAAATTCTCCGGTGGAGGAGATTCTAATCCTAGGACAAAGGTTTTGCCGCAACATATTCAGAACCAAGCAATTGTTTGTCACCAGAGTCATACAAGCCTTAGTAGCTGGAGTTATACTAGGGACCATATTTTTTGATGTTGGCAACAGAAAAGGACGAGTTGCCTTACAGACACGAAGTGGATTTTTCGCTTTCAGCCTTACTTTTTTGTTATCTTCAACTACAGAAGGCCTGCCTATTTTCTTGCAAGAGAAAAGGACTTTGATGAAAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTCTAGCAAACACCCTAGTGTTTCTTCCTTTCCTTTTGATGGTTGGTCTTCTATACTCTACTCCAGTTTATTGGCTGGTGGGTTTAAGGAAGGAAATAGATGGGTTCCTATACTTTTCTCTGGTTGTTTGGTTGGTGGTCCTCATGTCGAATTCTCTTGTAGCTTGTTTCAGTGCTCTGGTGCCAAATTTCATCCTGGGAACCTCAGTGATTGCAGGGTTAATGGGTTCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGGGAAAATACCCAGTTACTGGATTTTCATGCACTATTTAAGCCTATTCAAGTACCCATTCGAGTGTTTTATAATAAATGAATATGGAGGGAAACAAGGGAAAACCAGATGCCTAGAGAAGAGGAATGGAGAATGCAGTTTATATGGGGATGAGTTCTTAAGACAGCAAGGCCTGAAAGAGTCCCAAAGATGGAGTAATTTGGCTGTGATGTTGGGTTTCATAATTGGGTACAGAGTGCTATGCTTTTTTATTCTGTGGTACAGATGCCACAGAATCAGAAAATGA 1854 0.4223 MGSPFEPVSFPRKNPYRIETKNLSCRLFGQLDELRSLCFGSSQWNSAKLILKDVNCEAKPGELTVIAGPSGAGKTTLLEILAGRASLCEVSGQVLVNHRPMDLKQFRRTSGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKVAAARVAGLMKELGLDQIADSRIGTGRGGSSDQGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSLLRLMAFNQGKTIVLTIHQPGFRILQLVDHLVLLSDGFVIHNGSLNLLEARLKLAGHHIPHHVNVLEFSLDVMGSLVIQTSESRNNQLLLREREEQVCKMRMPCSMNNVREKAVHYSNSPVEEILILGQRFCRNIFRTKQLFVTRVIQALVAGVILGTIFFDVGNRKGRVALQTRSGFFAFSLTFLLSSTTEGLPIFLQEKRTLMKETSRGAYRVSSYVLANTLVFLPFLLMVGLLYSTPVYWLVGLRKEIDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGKIPSYWIFMHYLSLFKYPFECFIINEYGGKQGKTRCLEKRNGECSLYGDEFLRQQGLKESQRWSNLAVMLGFIIGYRVLCFFILWYRCHRIRK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3221 617 CDD ABCG_EPDR 41 260 - -
Acco01g3221 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 270 IPR027417 -
Acco01g3221 617 Pfam ABC-2 type transporter 340 551 IPR013525 GO:0016020|GO:0140359
Acco01g3221 617 FunFam ABC transporter G family member 10 35 284 - -
Acco01g3221 617 Gene3D - 30 279 IPR027417 -
Acco01g3221 617 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Acco01g3221 617 Pfam ABC transporter 51 205 IPR003439 GO:0005524
Acco01g3221 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Acco01g3221 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 602 - -
Acco01g3221 617 SMART AAA_5 60 255 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3221 Acco-ChrAcco01 49620959 49622812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3221 31 265 Calmodulin-binding Proteins AT2G36910 29.218 4.44e-11 64.3