Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3192 ATGAGACCCTTTTTGTTCACGCTATGCTTCTCTACCTTCCTGTACGTAGTTGCTGCTCTGAGTCCTGATGGGGTCTCTCTGCTTTCTCTCTCAAAGCATTGGACATTTGTGCCCTCTTCCATAACCTCAAGCTGGAAAATGTCAGACTCAACTCCATGCTCATGGGCAGGAATCCAGTGTGACAATGCCCACAATGTCATCTCCATTAACCTCACTTCTTTTTCCATTGTTGGTCAGTTAGGACCTGAAATAGCAGAGTTAAGTCACTTGCAAACTCTTATTTTTTATTCCAACCGTCTCTCAGGAACAATTCCCCCTCAGATAGGCAATTGTAGTATGCTTGTTTATTTGGACCTTTCTGACAACCACTTCACAGGGGAAATACCAAATGGCTTAAGCAACTGTAGTATGCTTGAGCATTTGGACCTTTCTGTGAATGCTCTTGGTGGGGAGATTCCAAACAGTTTCAAAAGCTTGCAAAATTTGCAATACTTCAACCTTTTCTCCAATCTAATAATTTCAAGCACTGGAATTCTTGAATACTTGTTTGATTTTCCTCAGTTAGACACTCTGTATTTGGAATTCAACAACCTAAGTGGTCCTATCCCCATGAATATTGGCAATAGCACCAAACTTAGGAGGTTGTATTTGGACAATAATCTCTTGTCTGGGGTGATACCCTCTTCCATTGGAAACTGCAGCAAATTAGAGGAAGTAAGTCTTGGTAAGAACAGATTACAGGGGATTTTACCTCAAAGTCTTAACAATCTCCATAATCTTGTTTATTTTGATGTCAGTTTTAACAATCTTGAAGGTCCAATTCCCTTAGGTTCTGGCAAATGTGAAAGTCTATATCTTTTGGATTTGTCATACAATGAATTTAGTGGGGGTATTCCTACTGGATTAAGGAATTGTACTGGCTTGACACAAGTTTTTGCTGTCAATAGCAACTTAATAGGCAACATTCCATCTTTCTTTAGTCTCCCGTGCAAACTCTCTGTTCTTCGCCTTTCTCGGAACCATTTGTCTGGACAGATACCTCCGGAAATAGGTCGTTGCGGGTCATTGAAGGAGTTGATTTTACATACCAATCAACTTGAGGGAGAAATTCCTAGTGAGTTGGCGATGCTAACTGAGTTGCAGACTTTGCACTTGTTTTACAATAAGCTCACTGGTGAAATCCCAATTAGCATATGGAAAATTCCAAGTCTTGTGAATGTCTTTTTGTTCAACAATAGCTTCCATGGGGAGCTACCTCCAGAAGCCACCAAACTTAAGCAGCTACAAAAAATCTCACTAGCTGAGAACAATTTCTCTGGGGCTATACCTCAAAGCTTAGGAATTAATAGTAGTTTGGTGTGGTTGGACTTGACAAATAACAGTTTTACTGGTCCCCTCCCTCCAAATCTTTGTTCTGGTAAGAAATTAGAGAGGCTAGTTGTGGGTATTAATCAATTGCAAGGCAGCATACCTTCTGACCTAGGAGCTTGTACAACTCTCACAAGGTTGATTCTTAAATCAAACAACTTCATTGGACCTCTTACTAATTTTGAAAATAATATGAATCTTGAATTCATGGACATCAGTGACAATAATATCAGTGGAGCAATTCCATCAAGTTTAGGGAATTGCAAAAACCTCACTGATATTAATTTGTCCGTGAACAAACTTTCAGGGTTCATTCCTTCAGAGCTAGGGAAACTGGCAAATCTTCGAAAGTTGAATCTTTCTGACAACAATCTGCAAGGTCCTTTGCCTCCTCTCTTGTCAAATTGTATCCAAATGGAATACTTTGATGTAGGTTTCAATTCCCTAAGTGGTTCATTTCCTTCAAGTTTGGGCAAATGGAGAGGGCTATCAACTTTGATCTTAAGAGAGAATCATTTCACAGGAGGCATCCCAACATTCTTAAAAGAATTTGAAATGCTTTTTGAGCTACAACTTGGGGGAAATGAATTTGGAGGTGAAATTCCTAGCTTAATTGGATCATTGCAGAATCTTCTATATGGTTTGAATTTAAGTGCTAATGGGTTGGTAGGCGATGTTCCATTAGAGATCGGGAAACTGAACAAGCTTCTGAGACTAGATTTGTCTCTTAACAATCTGTCTGGAAGCATAGAATTTCTTGAACAACTCTCTTCATTAGTTGAAGTCAATATCTCATTCAATTCATTTACTGGTCCTGTACCGAATGAGCTAATGAAGCTGATGAGTTCTCATCCATCATCATTCTTGGGCAATCCAGGTTTGTGTCTTAATTGTTTGCCCTCAGATAGCTCAAACTGCCCCAAGGATGTCAGTTTAAAGACTTGTGCCTCCATTTCAAGTCATCATGAAGGACTGAGTAAAGTGAAAATCATAGTGATATCACTTGGATCCTCCATTTTTGTTATTCTTTTGTTGTTAGGACTAACTTTTATGCTTCTCCTTAGCAAAAGATCTAGGAAGAATCTCAGAATATTTGCGAATCACGGTCCATCTTCCTTTCTCAAGAAAGTCATGGAGGCAACAGAGAATCTAAATGATCAGTATATAATTGGCAGAGGAGCTCATGGAGTGGTCTACAAGGTTTCAATGGATCCAAAAAATGTTTTTGCTGTGAAGAAACTTCCATTTGCCAACAATGAAGGGCAAAGCAAGAGCATGAGGAGAGAACTTGACATTGTTGGGAAGATTCGGCATCGAAATCTGGTCAGATTGAAGAACTTCTGGGTTGGAAAGGATTATGGCTTGATCATGTACACCTTCATGCAAAATGGAAGCTTGCATGATGTTTTGCATGAAATGAATCCACCACCATGCTTGGCTTGGAGTGTTCGCTATAAGATAGCTCTTGGAATTGCTCACGGACTAGCATACCTCCATTTTGATTGTGATCCAATCATAGTACACAGAGACATCAAACCACAAAACATACTTTTAGATTCTGACATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGGTTTTGGATCAAATCACTGCTTCAACAACATCTATAGCTGTTCCTGGCACAGTGGGATATATTGCACCAGAGAATGCATTTTCAAGTGTAGTGAGCTGGAAATCTGATGTGTATAGTTATGGAGTGGTTTTGCTTGAGCTGTTAACCAGAAAGAAGGTGCTAGATGGTTCATTCATGGAGGGAACAGATATAGTGGGGTGGGTTAAATCTGCATGGGAAGAATCAAGAGAAATTGATGGGATTGTTGATCCAAGCCTTGGTGATGAACTTTGGTATTCAAATATAAGGGAAGAAGTTGAACAAGTGTTTTTGGTGGCATTGAGATGTACTGAGAAGGATCCAAGTATAAGACCGACAATGAGAGAAGTCGTCAGCCAATTGATTATTAGAAACAAATCTTTAGTTGATAAGAAGTAA 3384 0.3948 MRPFLFTLCFSTFLYVVAALSPDGVSLLSLSKHWTFVPSSITSSWKMSDSTPCSWAGIQCDNAHNVISINLTSFSIVGQLGPEIAELSHLQTLIFYSNRLSGTIPPQIGNCSMLVYLDLSDNHFTGEIPNGLSNCSMLEHLDLSVNALGGEIPNSFKSLQNLQYFNLFSNLIISSTGILEYLFDFPQLDTLYLEFNNLSGPIPMNIGNSTKLRRLYLDNNLLSGVIPSSIGNCSKLEEVSLGKNRLQGILPQSLNNLHNLVYFDVSFNNLEGPIPLGSGKCESLYLLDLSYNEFSGGIPTGLRNCTGLTQVFAVNSNLIGNIPSFFSLPCKLSVLRLSRNHLSGQIPPEIGRCGSLKELILHTNQLEGEIPSELAMLTELQTLHLFYNKLTGEIPISIWKIPSLVNVFLFNNSFHGELPPEATKLKQLQKISLAENNFSGAIPQSLGINSSLVWLDLTNNSFTGPLPPNLCSGKKLERLVVGINQLQGSIPSDLGACTTLTRLILKSNNFIGPLTNFENNMNLEFMDISDNNISGAIPSSLGNCKNLTDINLSVNKLSGFIPSELGKLANLRKLNLSDNNLQGPLPPLLSNCIQMEYFDVGFNSLSGSFPSSLGKWRGLSTLILRENHFTGGIPTFLKEFEMLFELQLGGNEFGGEIPSLIGSLQNLLYGLNLSANGLVGDVPLEIGKLNKLLRLDLSLNNLSGSIEFLEQLSSLVEVNISFNSFTGPVPNELMKLMSSHPSSFLGNPGLCLNCLPSDSSNCPKDVSLKTCASISSHHEGLSKVKIIVISLGSSIFVILLLLGLTFMLLLSKRSRKNLRIFANHGPSSFLKKVMEATENLNDQYIIGRGAHGVVYKVSMDPKNVFAVKKLPFANNEGQSKSMRRELDIVGKIRHRNLVRLKNFWVGKDYGLIMYTFMQNGSLHDVLHEMNPPPCLAWSVRYKIALGIAHGLAYLHFDCDPIIVHRDIKPQNILLDSDMEPHIADFGIAKVLDQITASTTSIAVPGTVGYIAPENAFSSVVSWKSDVYSYGVVLLELLTRKKVLDGSFMEGTDIVGWVKSAWEESREIDGIVDPSLGDELWYSNIREEVEQVFLVALRCTEKDPSIRPTMREVVSQLIIRNKSLVDKK 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3192 1127 Pfam Protein kinase domain 844 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3192 1127 FunFam Serine/threonine-protein kinase-like protein CCR4 917 1127 - -
Acco01g3192 1127 ProSiteProfiles Leucine-rich repeat profile. 570 592 IPR001611 GO:0005515
Acco01g3192 1127 Gene3D Ribonuclease Inhibitor 451 762 IPR032675 -
Acco01g3192 1127 ProSitePatterns Protein kinases ATP-binding region signature. 846 869 IPR017441 GO:0005524
Acco01g3192 1127 Gene3D Phosphorylase Kinase; domain 1 805 916 - -
Acco01g3192 1127 SMART LRR_typ_2 87 111 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 377 401 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 328 353 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 234 256 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 568 592 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 159 185 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 210 233 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 257 281 IPR003591 -
Acco01g3192 1127 SMART LRR_typ_2 425 449 IPR003591 -
Acco01g3192 1127 SUPERFAMILY L domain-like 21 323 - -
Acco01g3192 1127 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 377 1116 - -
Acco01g3192 1127 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 807 916 - -
Acco01g3192 1127 SUPERFAMILY L domain-like 322 631 - -
Acco01g3192 1127 FunFam Leucine-rich repeat receptor protein kinase EMS1 346 445 - -
Acco01g3192 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 274 - -
Acco01g3192 1127 Gene3D Transferase(Phosphotransferase) domain 1 917 1125 - -
Acco01g3192 1127 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Acco01g3192 1127 Pfam Leucine rich repeat 522 581 IPR001611 GO:0005515
Acco01g3192 1127 ProSiteProfiles Leucine-rich repeat profile. 691 713 IPR001611 GO:0005515
Acco01g3192 1127 SUPERFAMILY L domain-like 596 751 - -
Acco01g3192 1127 Pfam Leucine Rich Repeat 114 135 IPR001611 GO:0005515
Acco01g3192 1127 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Acco01g3192 1127 SMART serkin_6 840 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3192 1127 Gene3D Ribonuclease Inhibitor 374 450 IPR032675 -
Acco01g3192 1127 ProSiteProfiles Protein kinase domain profile. 840 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3192 1127 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Acco01g3192 1127 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 474 760 - -
Acco01g3192 1127 FunFam Leucine-rich repeat receptor-like protein kinase 22 176 - -
Acco01g3192 1127 Gene3D Ribonuclease Inhibitor 279 373 IPR032675 -
Acco01g3192 1127 Gene3D Ribonuclease Inhibitor 176 278 IPR032675 -
Acco01g3192 1127 Gene3D Ribonuclease Inhibitor 22 175 IPR032675 -
Acco01g3192 1127 SUPERFAMILY Protein kinase-like (PK-like) 824 1119 IPR011009 -
Acco01g3192 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3192 Acco-ChrAcco01 49395187 49398683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3192 11 1116 Receptor kinase-like Gene Family AT1G73080 49.687 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g3192 Pkinase 8.7e-44 CL0016