Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3188 ATGAATGCCTTGAAGGCTTTGCAGGCAATATCTGATAAACTCACAAATGTGAATTGGAAGGTTACAGAGAGATCTTGCAATCCTGGAGACTCAGGATTTAACAACCTCCTTACTTCACCCTCTGAAATCACCAGGAATGTCACCTGCAATTGCACTTTCCAAAATGGTGCCGTCTGCCACGTCACTCATATTCAGTTGAAACGCCAGAACATAGCGGGAGAAATACCCAGTGAATTTGGAAATCTTACACAACTGATTCAACTGTCCCTTTTGGGGAATCGCATTAGTGGTCCAATTCCTGCCGAATTGGGTGAAATTGCTACTCTGCAGGAGCTGAGAATATCGGACTTGAATGGAACAACTATGAGATTTCCAAATCTAAAGGATTTGAAGATTTTGGAAAGACTGATATTGAGAAATTGCCAAATTGTTGGTCCCATTCCTGATGACTTCAGACAAATGACAAAATTAAAGACTCTAGACCTGAGTTTTAACATGTTGAATGGTTCAATCCCTCCTTCGTTTGAGGACTTGAAATCATTTAATCACATTGATTTATCTTACAACAATTTTAATGAGACTTCTGCAGCTAATTGCCAAGAGTTGAATGTGAACTTGGCTTCTAGTCTCTTATCCTCTGCAAGCAATTCACTCTCCTGTTTGAAGAAGGGTCTACGATGTGAGGGAAACCCAAAACATCATTCGTTGTTCATAAACTGTGGAGGAGACGAGATTGAGTTTGAGGGTCAAGTATATGAAAGAGATTCAACTCGAAATGGCATTTCATACTCTACTTTTCATCTTCATGACAACTGGGCTTATAGCAGCACAGGACTATATATGGGCAATGATAATGCTGATTTTATAGCGACAAATTCATCTTCATTGAATGCCAGCATCCCAGAATACTACCAAACCGCCCGCCTTAGCCCTCTATCGCTTAAGTACTATGGCCTATGCATGATGGAGGGCAATTATAATGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATATAGCAGCCTTGGTGTGCGCATATTTGATGTTTCAATTCAAGGTATTAAATACTTGAAAGATTTTAACATTGCGGAGAAAGCAGGTGGAGTTGGTAAGGACTTTACATGGGAACATGATGTTGATGTGAATGATCGCACCTTGGAAATTCATTTATATTGGGCAGGGAAAGGCACTATTGCAATTCCCACTAGAGGTGTATATGGACCCCTAATATCTGCTATCACTGTGACCCCAAACTTCAAAATTCCTTCAAAAGGGTTGTCCACCGGAGCTATTGTTGGAATTGTGGTCGGATCATGCGTTTTCGTCGTATTACTACTCATTGTCCTCCGAAAGAAAGGTTTCCTTGGTGGAAAAGATCCAAAAGACAGAGAACTTTTAGATCTTAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACAGCCACCAATAACTTTGACCCTGCCAATAAGATCGGAGAAGGAGGATTTGGGCCTGTGTATAAGGGTATGCTGCCAGATGGTGTAGTCATTGCTGTTAAGCAGCTCTCTTCCAAGTCAAAACAGGGGAATCGAGAATTTGTTAATGAGATAGGAATGATTTCTGCATTGCAGCATCCGAATCTTGTGAAGCTTTATGGCTGTTGCATAGATGGAAATCAACTGATGCTTATTTATGAATACATGGAGAACAATTGTCTTGCTCGAGCACTTTTTGGCCGCGCAGAACAGATGATACTCTTGGATTGGCCCACAAGATTGAAGATTTGTCAGGGGATAGCAAGGGGGTTAGCTTATCTTCATGAGGAGTCGAGATTGAAAATAGTACATAGGGACATTAAGGCGACAAACATCTTACTTGATAAGGATCTAAATGCTAAAATTTCTGACTTTGGTTTAGCAAAGCTTGATGAAGAAGAGAATACACATATCAGCACCCGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTATTTGACGGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGTTTTGGAAATTGTTAGTGGAAAGAACAACATGAATTACCGGCCACAGGATGAGTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTCCTTGAACTGGTGGATCTGCATCTTGGTTCAAGCTACTCCCAAGAAGAGGCCATGAGAATGCTCAACTTGGCTCTTTTGTGCACCAACCCTTCTCCCTCCCTCAGACCAGCCATGTCATCTATAGTGAGCATGCTTGAAGGAAAAATGCCAATTCAAGCTCCAATAATCAAGCGCAAGGATTCAAGCCAGGAACATCAGGATGCAAGGTTCAAAGCCTTGGAGATGCTATCACATGACAGCCAGACGTCTGTAGCCTCTCAAGTAAGTATTGAGCAAAGAGGCAAGTCAATGGATGGACCATGGATTGATTCCTCAATATCTCTTCCTAGTGGAGATGATTATTCTTCATCTAGGAGCCTTCTTTGA 2511 0.4114 MNALKALQAISDKLTNVNWKVTERSCNPGDSGFNNLLTSPSEITRNVTCNCTFQNGAVCHVTHIQLKRQNIAGEIPSEFGNLTQLIQLSLLGNRISGPIPAELGEIATLQELRISDLNGTTMRFPNLKDLKILERLILRNCQIVGPIPDDFRQMTKLKTLDLSFNMLNGSIPPSFEDLKSFNHIDLSYNNFNETSAANCQELNVNLASSLLSSASNSLSCLKKGLRCEGNPKHHSLFINCGGDEIEFEGQVYERDSTRNGISYSTFHLHDNWAYSSTGLYMGNDNADFIATNSSSLNASIPEYYQTARLSPLSLKYYGLCMMEGNYNVKLHFAEIMFSDDQTYSSLGVRIFDVSIQGIKYLKDFNIAEKAGGVGKDFTWEHDVDVNDRTLEIHLYWAGKGTIAIPTRGVYGPLISAITVTPNFKIPSKGLSTGAIVGIVVGSCVFVVLLLIVLRKKGFLGGKDPKDRELLDLKTGYFSLRQIKTATNNFDPANKIGEGGFGPVYKGMLPDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNCLARALFGRAEQMILLDWPTRLKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLEIVSGKNNMNYRPQDEFVHLLDWAYVLQEQGNLLELVDLHLGSSYSQEEAMRMLNLALLCTNPSPSLRPAMSSIVSMLEGKMPIQAPIIKRKDSSQEHQDARFKALEMLSHDSQTSVASQVSIEQRGKSMDGPWIDSSISLPSGDDYSSSRSLL 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3188 836 ProSiteProfiles Protein kinase domain profile. 489 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3188 836 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 461 564 - -
Acco01g3188 836 SUPERFAMILY L domain-like 49 212 - -
Acco01g3188 836 Pfam Protein tyrosine and serine/threonine kinase 493 758 IPR001245 GO:0004672|GO:0006468
Acco01g3188 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 70 795 - -
Acco01g3188 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Acco01g3188 836 SMART serkin_6 489 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3188 836 FunFam Putative LRR receptor-like serine/threonine-protein kinase 565 772 - -
Acco01g3188 836 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 233 422 - -
Acco01g3188 836 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
Acco01g3188 836 Gene3D Phosphorylase Kinase; domain 1 461 564 - -
Acco01g3188 836 Gene3D Transferase(Phosphotransferase) domain 1 565 785 - -
Acco01g3188 836 CDD STKc_IRAK 495 762 - -
Acco01g3188 836 SUPERFAMILY Protein kinase-like (PK-like) 473 761 IPR011009 -
Acco01g3188 836 Gene3D - 233 422 - -
Acco01g3188 836 Pfam Malectin domain 236 417 IPR021720 -
Acco01g3188 836 MobiDBLite consensus disorder prediction 798 836 - -
Acco01g3188 836 Gene3D Ribonuclease Inhibitor 4 130 IPR032675 -
Acco01g3188 836 Gene3D Ribonuclease Inhibitor 131 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3188 Acco-ChrAcco01 49364488 49371259 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3188 60 827 Receptor kinase-like Gene Family AT1G53440 61.663 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3188 PK_Tyr_Ser-Thr 7.9e-50 CL0016