Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3186 ATGCCATATATAGGAACCTCTTTGCAAGCTCGTCAATGGGCAACAACTCGTATAAAATATGAAGGTGATGCAGATAAAGCTGGACCGACTAGATTCTATAACAGTGGTGGCAAATGGGCATTTAGCACCACTGGCTATTACATGGATACTGATGATAGTACAGACTACCACACCTATTCAAACCAGTCCTGGCTTTCAATGACCGACGACGAAGCTAAACTATATATGAATGCCCGTGGAGAGAGGGTGCTAGAGAACTTCAACATTGCTGAACGAGCAGGAGGAGTAGGGAAGGCGATAATAGAAGCATTCACTGCTGATGTCACTAATAATAGCTTGGAGATTAGATTCTATTGGGCTGGAAAAGGGACAACTGCTATCCCATTTAAATCAGTATACGGTCCTCTCATATCTGCTATCTCCGTGGAATACATACCAGAAAATGGAATATCTACGGGAGCTGTCGTAGGAATTGTGGTTGCAGTAGCCGTTTTGGTGATCTTGGTATTTGGTGTACTCTGGTGGAGAGGCTGTATAGGTCACAGAAGTCCGTTGGCTAAAGATCTTCAGGGTTTGGATCTTAGAACTGGTATATTCACCTTCAAGGAAATCAAAGCAGCAACCAACAACTTCAATATAGCTAATAAGATCGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGTACCCTCCCAAATGGCACAATAATTGCAGTTAAGCAGCTATCTACCAAATCAAAGCAAGGGAACCGTGAATTTGTTAATGAAATAGGCATGATTTCAGCTTTGCAACATCCCTATCTTGTTAAGCTCTATGGCTGTTGTGTTGAAGGTGATCAATTGTTGTTGATATATGAGTTCATGGAGAACAATAGTCTTGCCCGTGCCTTATTTGGTTCAGAAGAATTGGGATTAAAATTAGATTGGCCAATAAGACACAAGATTTGTGTTGGGATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGGTTGAAGATTGTCCATAGAGACATTAAGGCCACTAATGTGCTACTTGATGAAGAATTGAACCCCAAGATATCAGATTTTGGTTTGGCCAAACTTGTTGAAGAGGATAATACCCACATAAGCACTCGAATTGCTGGCACTTATGGATATATGGCACCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGACGTCTATAGTTTTGGAATTGTTGCCCTAGAAATTGTGAGTGGGAGGGTCAACAGCATTCACCGGGCAAAGGAGGAAGCAATCTATCTTCTTGACTGGGCACGTATCTTGAAAGAAAAAGGAGAATTACTAGAGCTGGTTGATCCAAGGTTGGGCTCAAACTTTGACAAGGAGCAAGTAATGGTGATGATCCAAGTGGCTCTCCTATGTACCAATATAACCCCATCATTGAGGCCTACCATGTCTTCAGTGGTGAGCATGCTTGAAGGTAAAAGTGTGGTTGAGGAGATAGTTTCAGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGTAATGAGGATGATGTTATACAAACAGATGGAAGAAAGAAATAATATGACTGAGATTCAACAAGAAGGTTCATCAGTGGTCGAACTGTGCGCTGCTTCATCAACATCGGCAACGGATCTCTACCCTCTTCATTTGGACTCCTCTTACTGGGATAAAAGAGATTATCATTAG 1686 0.4187 MPYIGTSLQARQWATTRIKYEGDADKAGPTRFYNSGGKWAFSTTGYYMDTDDSTDYHTYSNQSWLSMTDDEAKLYMNARGERVLENFNIAERAGGVGKAIIEAFTADVTNNSLEIRFYWAGKGTTAIPFKSVYGPLISAISVEYIPENGISTGAVVGIVVAVAVLVILVFGVLWWRGCIGHRSPLAKDLQGLDLRTGIFTFKEIKAATNNFNIANKIGEGGFGPVYKGTLPNGTIIAVKQLSTKSKQGNREFVNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEFMENNSLARALFGSEELGLKLDWPIRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDEELNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRVNSIHRAKEEAIYLLDWARILKEKGELLELVDPRLGSNFDKEQVMVMIQVALLCTNITPSLRPTMSSVVSMLEGKSVVEEIVSESSEALDEKKLEVMRMMLYKQMEERNNMTEIQQEGSSVVELCAASSTSATDLYPLHLDSSYWDKRDYH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3186 561 ProSiteProfiles Protein kinase domain profile. 211 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3186 561 Gene3D Transferase(Phosphotransferase) domain 1 287 500 - -
Acco01g3186 561 Pfam Protein kinase domain 212 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3186 561 SUPERFAMILY Protein kinase-like (PK-like) 195 486 IPR011009 -
Acco01g3186 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Acco01g3186 561 SMART serkin_6 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3186 561 Pfam Malectin domain 79 140 IPR021720 -
Acco01g3186 561 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 61 510 - -
Acco01g3186 561 Gene3D Phosphorylase Kinase; domain 1 183 286 - -
Acco01g3186 561 FunFam Putative LRR receptor-like serine/threonine-protein kinase 287 494 - -
Acco01g3186 561 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 180 286 - -
Acco01g3186 561 CDD STKc_IRAK 217 484 - -
Acco01g3186 561 Gene3D - 73 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3186 Acco-ChrAcco01 49341429 49345956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3186 61 510 Receptor kinase-like Gene Family AT1G53420 62.719 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3186 Pkinase 4.3e-48 CL0016