Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3185 ATGGAGCTTGCCATGCCAAGCTCCAATAAAACTGTCTCAATGTTCTTCTTTGGATTTCTGCTTCTCAGTTTCTTCACAGATTTTACATCCAACGCTCAACTTATACCCCTACATGAAGTGAAAGCTCTTCAGGCAATATCTGATAAATGCAAGAACGTGAATTGGAAGGTGACGCAAAGATCTTGCATTAATGCAAACAAAGGATTTAATAACTTTATGATTAACATGTCCCTACCCAGTCCTTTCACTCAAATTGCCAGCAATGTCACTTGCGATTGCTCTTTCCAAAACGGCACCGTTTGCCATGTCACTAACATTATGTTGAGAGGCCTGAATATATCTGGAGCTATCCCCAATGAATTCGGAGATCTCACCCAGCTGAATATACTTGATCTCACTTATAACTATCTCAATGGCACAATCCCAACGTTTTTTACTCGCATCCCTATTACCAATCTGTCCATGGTGGGGAATCGAATTAGTGGTTCAATTCCTGCGGAATTGGGCAAAATTGAGAGTCTACTGGAGCTGAACTTGGAAGATAATGAGCTTGGAGGACATCTTCCTCAAAGTCTTGGAAATTTGAGCAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACATTTGGAAATCTCAAGAACCTTACTGATTTGAATATGCAGGGCACAGGGATGGAAGGCCCAATTCCTTCCACCATATCCTTGTTGAAAAATTTGAAAGAATTGAGAATTTCTGATTTGAGGGGAACAACAACTATGACATTTCCTGATTTGAAGGATATGGAGAATTTGCAACGATTAGAATTGAGAAATTGCTTGATTACTGGTCCGATTCCAAAGTACATTGGCACAATAAAAAACTTGAAGACTTTAGACCTGAGTTTTAACAGGTTGATTGGCCCAATACCAGACTCATTTCAAGATTTGCAGTTTAGTCACATGTTTCTGACAAACAATTATCTGAGTGGAGCAATTCAACAATGGGTGCTGCAGAGCAAATATAATATTGATTTATCTTACAACAATTTTACTGAGGCTTCTACACCTAGTTGCCAGATCGTACAAGTGAACTTAGCTTCCAGCCTTTCATCTTCAGTTAGAAATGCGACCTTCTGTCTTAAGAAGGGCCTAACTTGTCCAGAAAAACCTCTGTATTCTTCGTTGTTCATAAATTCTGGAGGACCCAAGATGGAGTTTGAGGAGACTGAATATGAAGAAGATCTCAGTCAAGATGGCATTTCATACTTTCATATACAAGATCACAAATGGGCCTATAGCAGCACGGGAACATACATATATAATGATAAAGCTAATTATGTAGCCAGTCTACAAACAAATAAGTTTTATTTGAATGTTAATGGCTCAGAATACTACCAAACAGCGCGGCTCAGCCCTCAATCGCTGAAGTACTATGGCCTATGTATGATGAAGGGTAGCTATAGAGTAAAGCTGCATTTTGCTGAGATAATGTTTTCTGATGACCAGACCTTTAGCAGTCTTGGAACTCGCATATTCGATGTTTCAATTCAAGGTTTTAAATACTTGAAAGATTTTAACATCGCGAAAGAAGCTGGTGGAGTTGGTAAGGGCATCACTAAGGTATTTGATGTTGATGTGAATGATACCTCCCTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACGGCAATTCCCACTAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACGCCAAACTTCAAAGTTCCTTCACAAGGATTCTCTGTTAATGACCTCTCTGCTGGAGCTATCGTTGCAATTGTGGTTGGATTATGTGTATTCCTCATGCTGGTGGTACTAATTACTATCCTCCGAAAGAATGGTTTCCTTGGTGGGAAAGATCCTCAACACATAGATCTTAGGGGATTGGATCTTAAAACTGGTATGTTTACCTTAAAGGAAATCAAAGCAGCAACCAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTTTAAGGGCATTCTCCCAGATGGCAGAATAATTGCAGTTAAGAAGCTATCCGCTAAATCAAGGCAAGGGAATCGTGAATTTCTAAATGAAGTAGGCATGATTTTTACTTTGCAACACCCTTGCCTTGTTAAGCTTTATGGCTGTTGTGTTGAAGGAGATCAATTGTTGCTCGTATACGAGTTTATGGATAACAATAGCCTTGCTCGCGCTTTGTTTGAAGAATTCAAGTTAAAATTGGAGTGGCCAACTAGATACAAGATTTGTGTTGGGATTGCTAGAGGTTTGCTTTATCTTCACGAAGAATCAAGATTTAAAATTGTTCATAGAGACATCAAGGCCACTAATGTTTTGCTTGATAAAGATCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAGGAAAATACACACATTAGCACCAGAATTGCTGGAACTCGCGGTTACATGGCCCCTGAATATGCAATGCATGGATATTTGACTAAGAAAGCAGATGTTTATAGCTTTGGGATCGTTGTTTTAGAAATTATCAGTGGCAAGACCAACACCACTCAAAAGTCAAAGGAAGAATGTTTTTATTTGCGTGATTGGGCACATCAGTTGAAAGATGGAAATCATCTGATGGATCTGGTGGATCCAAAGTTGGGTGAGGACTTTAACAGAGAGGAAATAATGACTGTGATAGATGTGGCTCTCCAATGCACTGAAAACTCTCCAGCACTTAGGCCTACCATGACTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGTTCAGAAGGTAGTCTTGGATGATGAAAGTGAGATTATTATGGATGATGACTTGAAATTGACCAAGAAACAAGAAGCTGATAAAGATGAGACTGATGAGGCCATAAACTCGTCAAGCCATGAGTCACAGACCACATCTAAATCCTTTTCAGATCTCTATCCGGCCAATAAAGATGCTTCTTTCTCGCACAAAACCAACTAG 3000 0.3957 MELAMPSSNKTVSMFFFGFLLLSFFTDFTSNAQLIPLHEVKALQAISDKCKNVNWKVTQRSCINANKGFNNFMINMSLPSPFTQIASNVTCDCSFQNGTVCHVTNIMLRGLNISGAIPNEFGDLTQLNILDLTYNYLNGTIPTFFTRIPITNLSMVGNRISGSIPAELGKIESLLELNLEDNELGGHLPQSLGNLSNLRRLLLSANNFTGIIPETFGNLKNLTDLNMQGTGMEGPIPSTISLLKNLKELRISDLRGTTTMTFPDLKDMENLQRLELRNCLITGPIPKYIGTIKNLKTLDLSFNRLIGPIPDSFQDLQFSHMFLTNNYLSGAIQQWVLQSKYNIDLSYNNFTEASTPSCQIVQVNLASSLSSSVRNATFCLKKGLTCPEKPLYSSLFINSGGPKMEFEETEYEEDLSQDGISYFHIQDHKWAYSSTGTYIYNDKANYVASLQTNKFYLNVNGSEYYQTARLSPQSLKYYGLCMMKGSYRVKLHFAEIMFSDDQTFSSLGTRIFDVSIQGFKYLKDFNIAKEAGGVGKGITKVFDVDVNDTSLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKVPSQGFSVNDLSAGAIVAIVVGLCVFLMLVVLITILRKNGFLGGKDPQHIDLRGLDLKTGMFTLKEIKAATNNFNADNKIGEGGFGPVFKGILPDGRIIAVKKLSAKSRQGNREFLNEVGMIFTLQHPCLVKLYGCCVEGDQLLLVYEFMDNNSLARALFEEFKLKLEWPTRYKICVGIARGLLYLHEESRFKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMHGYLTKKADVYSFGIVVLEIISGKTNTTQKSKEECFYLRDWAHQLKDGNHLMDLVDPKLGEDFNREEIMTVIDVALQCTENSPALRPTMTKVLSILEGRPAVQKVVLDDESEIIMDDDLKLTKKQEADKDETDEAINSSSHESQTTSKSFSDLYPANKDASFSHKTN 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3185 999 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 223 IPR000225 GO:0005515
Acco01g3185 999 SUPERFAMILY Protein kinase-like (PK-like) 643 930 IPR011009 -
Acco01g3185 999 Pfam Leucine Rich Repeat 294 316 IPR001611 GO:0005515
Acco01g3185 999 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 211 - -
Acco01g3185 999 Gene3D Transferase(Phosphotransferase) domain 1 735 950 - -
Acco01g3185 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 969 - -
Acco01g3185 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 734 - -
Acco01g3185 999 Gene3D Phosphorylase Kinase; domain 1 631 734 - -
Acco01g3185 999 CDD STKc_IRAK 665 930 - -
Acco01g3185 999 MobiDBLite consensus disorder prediction 954 969 - -
Acco01g3185 999 Gene3D - 393 583 - -
Acco01g3185 999 Pfam Malectin domain 394 578 IPR021720 -
Acco01g3185 999 Gene3D Ribonuclease Inhibitor 78 210 IPR032675 -
Acco01g3185 999 MobiDBLite consensus disorder prediction 954 999 - -
Acco01g3185 999 ProSiteProfiles Protein kinase domain profile. 659 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3185 999 MobiDBLite consensus disorder prediction 970 999 - -
Acco01g3185 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Acco01g3185 999 Pfam Leucine rich repeat 196 252 IPR001611 GO:0005515
Acco01g3185 999 SUPERFAMILY L domain-like 92 351 - -
Acco01g3185 999 Gene3D Ribonuclease Inhibitor 211 385 IPR032675 -
Acco01g3185 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 392 583 - -
Acco01g3185 999 SMART serkin_6 659 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3185 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 940 - -
Acco01g3185 999 Pfam Protein kinase domain 660 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3185 Acco-ChrAcco01 49324750 49332727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3185 15 995 Receptor kinase-like Gene Family AT1G53440 53.974 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3185 Pkinase 1.1e-49 CL0016