Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3181 ATGAACTCTATGAATATGATGAGGTTGGCTCGGTTCTTCATCCTTTCGTTCCTCACTGTTTGGTCCACATCTTTTGCTTCTGCTACAAATTTACCAGACGATGAAGTGAAAAAGCTGAAAGATATAGCAGAGACGTTGGGGAAGAAGGATTGGGACTTCCAGGTAGATCCATGCGGTGGAGAAAATGGATGGGTTACGCCTAATCCAGTTCATGGCGATGAAAAAAATGTGACCTGCGTTTGCTCGTTTCTCAACGATAAAAATGCCACCGTCTGCCACGTCACGAACATAGTCCTGAAAGGGCTAAATCTCCAAGGCACGCTCCCTCGTGAACTGGTCAACTTGCCCTATCTTCGACAAATTGATCTCTCTCGCAATTACCTGAGCGGCACAATCCCTAAAGAATGGGCCTCCTTGAAACATCTTGTCAACATTTCCCTCCTTGGAAATCGATTGACCGGCCTAATCCCGGCAGAGCTGGGAAATCTCAAAAGTCTCAGAAGCATGGTTTTAGAGTTCAATCAATTATCTGGACACCTGCCTCCGGAGCTTGGGAATCTTACCAACATTCAAAGACTGTTTCTTACTTCCAACAATTTTTCTGGGGAATTGCCTGCAACGTTTGCAAGACTTACTAGATTGATAGACTTCCGGATTGGTGGCAATCAATTTTCTGGAGAGATACCTAGTTTTATTGGGAGCTGGACAAATCTAGTGAAACTAGTGATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCCTCTGAAATTTCGTTTCTGCATAATATGTTTGACTTGAGAATTAGTGACTTGAATGGACCTGATTCCACTTTTCCACAACTTTCTGGGATGACAGGATTGCGTACATTGATACTAAGGAGTTGCAATATAACTGGAATATTACCTGAATATCTTGGAACAATGACCAGTATAAATTCCTTAGATCTCAGCTTTAACAAATTAACTGGACAAATTCCAAGCACCTATGCTGGCTTAAGAAAAGCAGAATACATATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAAAGTTCCGGTTTTGTAGATCTTTCATACAACAACTTCAGCGTTGAAGGGCCAGGGCAGCCAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACCTTGACTGGAAATAACTCGGGAACAGTTCCATGTTTGAGAGGCTTTCACTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGCGGCCAGCAATTAGTAGTAAACAAAAGTACAATATTTGAAGAAGATTCAGATGGGTCCGGATCAGCAAGATTTGACCAGAGTAACACAAATTGGATAATGAGCAGCACTGGTTACTTCTTGGATAAAGAACGCGTAGATTTCTATACTGTGCGAAGTTCGTCTGCACTCTCTATGACCAATGCTGAACTATACATGGATGCACGTGTTTCTCCACTCTCTTTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACAAAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGACGATAAGACATATAGCAGCCTTGGAAGGCGTATATTTGACGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAGGGCAGTCATCAAAGAATTCACTGGTATTGTGACTAGGAATTCGTTGGAGGTCCGCCTCTATTGGGCTGGGAAAGGGACAACTGCTATTCCATATAAATCACTATATGGCCCACTTATATCAGCTATATCTGTGGATCCTGACTTTAATCCCCCGTTGGAAAATAAAAGTAGCATATCTGGAGGGACAGTGGCTGGAATTGTGGTTGCTGGAGCAATTTTTGTAATCCTGGTATTTGGTCTACTTTGGCGGATTGGCTGTCTTGGACCCAAAAATTCATTGGCAAGAGAGCTAAAGAGCTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCAGCGACAAACAACTTCGATGTCACCAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGCTTTCTGTCAGATGGCACCATGATAGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAGGGAAATCGGGAGTTTATAAATGAGATAGGCACGATTTCTGCTATGCAACATCCTTGTCTTGTTAAGCTTTACGGCTGTTGTGTTGAGAGAGATCAATTGTTGCTGGTGTATGAATACATGCAAAACAACAGTCTTGCTCGTGCTTTATTTGGCAAAGAGGGTCAAATACATTTAGATTGGCCGACAAGATACAAGATTTGTATAGGTATCGCTAGAGGTCTGGCTTTCCTACATGAAGAATCAAGATTGAAGATCGTTCATAGGGACATTAAGGCCACCAACGTGTTGCTTGATAAAGATCTCAATCCAAAGATATCCGATTTTGGTTTGGCCAAACTTTATGAAGAGGAAGATACCCATGTCAGCACTAGAATAGCTGGGACATATGGATACATGTCTCCTGAATATGCAATGCATGGTCATCTAAGTGACAAAGTAGATGTCTATAGTTTTGGAATTGTTGCACTGGAAATTGTTAGCGGGAAGAGCAACAACATGGACCATAGCATCCATCTTCTTGATTGGGCGCATTTGTTGAAGGAAAACGACAATGTAATGGAGATAGTGGATCCAAGGTTGAATTCCAAGTTTAAAAAAGCAGAGGCTATGGTGATGATCAACGTAGCTTTGCTATGCACAAATGTGAGTGCATCACTCAGGCCCACCATGTCTTCAGTGGTGAGCATGCTTGAAGACAGAACTGTTAGGGAGGTGGTTTCAGATGGGAGTAAGGTGAAGCATGAGATGAAGATGAGAAAGTATTTCCAAAAGATGAGAAATAGCATATCAGTGGAGGAGGGGTCATCATGTATTGATTCACCGACATCAGTCACTGATCTCTATTCTGTTCACTTGGATTCCTCTTATTGGATGAACAGAAGTTAG 3000 0.4207 MNSMNMMRLARFFILSFLTVWSTSFASATNLPDDEVKKLKDIAETLGKKDWDFQVDPCGGENGWVTPNPVHGDEKNVTCVCSFLNDKNATVCHVTNIVLKGLNLQGTLPRELVNLPYLRQIDLSRNYLSGTIPKEWASLKHLVNISLLGNRLTGLIPAELGNLKSLRSMVLEFNQLSGHLPPELGNLTNIQRLFLTSNNFSGELPATFARLTRLIDFRIGGNQFSGEIPSFIGSWTNLVKLVIQGSGLSGPIPSEISFLHNMFDLRISDLNGPDSTFPQLSGMTGLRTLILRSCNITGILPEYLGTMTSINSLDLSFNKLTGQIPSTYAGLRKAEYIYLTGNLLSGPVPEWVESSGFVDLSYNNFSVEGPGQPTCKTGNVNLFSSTLTGNNSGTVPCLRGFHCPKTWYSLHINCGGQQLVVNKSTIFEEDSDGSGSARFDQSNTNWIMSSTGYFLDKERVDFYTVRSSSALSMTNAELYMDARVSPLSLSYFAFCMGNGNYKVKLHFAEIMFTDDKTYSSLGRRIFDVYIQGKLVLKDFNIAEEAGGVGRAVIKEFTGIVTRNSLEVRLYWAGKGTTAIPYKSLYGPLISAISVDPDFNPPLENKSSISGGTVAGIVVAGAIFVILVFGLLWRIGCLGPKNSLARELKSLDLQTGIFTLRQIKAATNNFDVTNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSKQGNREFINEIGTISAMQHPCLVKLYGCCVERDQLLLVYEYMQNNSLARALFGKEGQIHLDWPTRYKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEEDTHVSTRIAGTYGYMSPEYAMHGHLSDKVDVYSFGIVALEIVSGKSNNMDHSIHLLDWAHLLKENDNVMEIVDPRLNSKFKKAEAMVMINVALLCTNVSASLRPTMSSVVSMLEDRTVREVVSDGSKVKHEMKMRKYFQKMRNSISVEEGSSCIDSPTSVTDLYSVHLDSSYWMNRS 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3181 999 Gene3D Ribonuclease Inhibitor 48 198 IPR032675 -
Acco01g3181 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 744 - -
Acco01g3181 999 SUPERFAMILY L domain-like 89 366 - -
Acco01g3181 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 407 597 - -
Acco01g3181 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 745 946 - -
Acco01g3181 999 Gene3D Ribonuclease Inhibitor 262 410 IPR032675 -
Acco01g3181 999 Gene3D - 411 596 - -
Acco01g3181 999 SUPERFAMILY Protein kinase-like (PK-like) 652 939 IPR011009 -
Acco01g3181 999 Gene3D Phosphorylase Kinase; domain 1 639 744 - -
Acco01g3181 999 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 32 271 - -
Acco01g3181 999 Gene3D Ribonuclease Inhibitor 199 261 IPR032675 -
Acco01g3181 999 Pfam Protein tyrosine and serine/threonine kinase 671 935 IPR001245 GO:0004672|GO:0006468
Acco01g3181 999 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Acco01g3181 999 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Acco01g3181 999 SMART serkin_6 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3181 999 Gene3D Transferase(Phosphotransferase) domain 1 745 960 - -
Acco01g3181 999 CDD STKc_IRAK 675 936 - -
Acco01g3181 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Acco01g3181 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 959 - -
Acco01g3181 999 Pfam Malectin domain 409 592 IPR021720 -
Acco01g3181 999 ProSiteProfiles Protein kinase domain profile. 669 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3181 Acco-ChrAcco01 49280453 49287056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3181 25 984 Receptor kinase-like Gene Family AT1G53420 54.888 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3181 PK_Tyr_Ser-Thr 2.7e-47 CL0016