Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3172 ATGCCTGGGAATAGTAAGTGTAACGGTAATCCTGATCATATTCCAGGTCGTGTTGGACGACTTGTCAGAGACAGAGAGCTAAGAAAAAACAGCAGGGCTTCTCATTTGAATGAGTCAGATGATAATAATAATAATGGGGTAACTGAACCGTTTGAGCATAACCACCGTTTTAGAGGAGATAATAACACAGGGGCTTCTCATGCACAATACCCGGAGGAAGCTGCAAGGGGGCTTAGTGAGGGATGTCATAGACATGATGGGAAGCCTTGTAGACAACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCACAGCAGTTAGGAGAGGCGAAGCTTCATGGTCTCTGGAGCTCAGCGCTGGAGGTTTAGTTAGCGCACTTTTAGGTGTTAAGGAGTTTAAGGCAAGGTGGATAGGGTGGGCTGGCGTCAATGTGCCAGATAAGACTGGACAGGAGGCACTTACTCTAGCTTTGGCTGAAAAGAGGTGTATCCCAGTATTTCTGGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACCACACGGAGCTTCCAGTCTCAGTTTGAAGCATACAAGAAAGCAAACCAAATGTTTGCTGATGTTGTGAACGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAATGTTTAAAGGAATATAAAACTAAAATGAAAGTTGGTTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTACCATCACGTTCGGAGCTCCTTCATGCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGGCTTGAGGGCACTCCAGAAGGGGTTGAGGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCGATTGGAATAGACTCTGATCGATTCAGACGTGCACTCCAACTTGATCAAGTGAAGGAACATATCAAAGAATTGGAAAAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGGCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAGAACGAAGATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAGAAACTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCATCTGGACCGTTCACTTGATTTTCATGCACTATGTGCTTTATATGCTGTTACTGATGTAGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGATAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGCGCAGCACAGTCTCTAGGTGGAGGAGCAATTCTGGTTAACCCCTGGAATATCACAGAAGTTGCAACCGCAATTGCGCAGGCTCTGGATATGCCAGCTTGGGAAAGAGAGAAACGTCATAGGCACAATTATGTACATGTAACGACCCACACTGCTCAAGAATGGGCTGAGACTTTTGTAAGTGAACTAAATGATACTGTGGTCGAGGCACAACTAAGGACAAGACAAGTGCCACCTCCACTTCCAACCAAGATTACAGTTGAACGTTATCTGCAGTCAAGTAATCGATTGCTTATATTGGGATTCAATGCAACTTTAACTGAACCAGTTGAAAAGAAAGGCGACCAGATTAAGGAAATGGAACTCAAGGTGCATCCAAAATTAAAGCAACCATTGACAGCACTTTGTGATGACCCGAATACCACAATTGTTGTGCTTAGCGGAAGTGGTCGAAATGTCCTATATAACAACTTTAAGGAATACAACATGTGGCTAGCAGCAGAGAACGGGATGTTTTTACGCCCCCCATATGGAGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAGTGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACTCCCCGGTCTCATTTTGATTTTGACGAAAGGGAGACCTCTCTTGTATGGAACTACAAATATGCGGATATTGAGTTTGGAAGACTTCAAGCGAGGGATATGTTGCAGCATCTCTGGACCGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCAGTTGAAGTGCGAGCTGTTGGTGTTACGAAGGGAGCAGCTATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATTCATGACAGCACCAATCGATTATGTTCTGTGTATAGGACATTTTCTATCAAAGGATGAAGATGTTTATTCCTTCTTTGAGCCGGAGCTTCCTTCTAGCAGCGTGGGCGTTGCTCGACCCAAGACTTCGGAAGCAGGTAAGTTTCCTGCAGAGAGAAGATCATCTCTGAAGATTCCAAACAGTACTAAAACGGGAACAAAATCACCTCAAAATAAGGCAGAGAAGAAAACCATAAACCATATATGCAATGCCGAACCAAGGAGGCCAGCATCTGATAAGATCTCCTCATGGAATGTGCTTGACCTGAAGAAGGACAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGCTATATCCTCGGATCCTCAGATGATGTTGCTACTTTCCTCGAGAAACTGGCTCAAGCATCTTCTCCTAACTATTTATCAACCACAAATTAA 2796 0.4349 MPGNSKCNGNPDHIPGRVGRLVRDRELRKNSRASHLNESDDNNNNGVTEPFEHNHRFRGDNNTGASHAQYPEEAARGLSEGCHRHDGKPCRQQRLLVVANRLPVTAVRRGEASWSLELSAGGLVSALLGVKEFKARWIGWAGVNVPDKTGQEALTLALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYKTKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALQLDQVKEHIKELEKRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENEDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGGGAILVNPWNITEVATAIAQALDMPAWEREKRHRHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKITVERYLQSSNRLLILGFNATLTEPVEKKGDQIKEMELKVHPKLKQPLTALCDDPNTTIVVLSGSGRNVLYNNFKEYNMWLAAENGMFLRPPYGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFDERETSLVWNYKYADIEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKFMTAPIDYVLCIGHFLSKDEDVYSFFEPELPSSSVGVARPKTSEAGKFPAERRSSLKIPNSTKTGTKSPQNKAEKKTINHICNAEPRRPASDKISSWNVLDLKKDNYFSCAVGRTRTNARYILGSSDDVATFLEKLAQASSPNYLSTTN 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3172 931 MobiDBLite consensus disorder prediction 818 857 - -
Acco01g3172 931 Gene3D - 615 796 IPR023214 -
Acco01g3172 931 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 86 920 IPR001830 GO:0003824|GO:0005992
Acco01g3172 931 MobiDBLite consensus disorder prediction 17 36 - -
Acco01g3172 931 Gene3D Glycogen Phosphorylase B; 336 543 - -
Acco01g3172 931 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 85 340 - -
Acco01g3172 931 Gene3D - 681 763 - -
Acco01g3172 931 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Acco01g3172 931 Gene3D Glycogen Phosphorylase B; 81 333 - -
Acco01g3172 931 CDD HAD_TPP 592 827 - -
Acco01g3172 931 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 341 543 - -
Acco01g3172 931 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
Acco01g3172 931 FunFam Alpha,alpha-trehalose-phosphate synthase 615 686 - -
Acco01g3172 931 SUPERFAMILY HAD-like 591 919 IPR036412 -
Acco01g3172 931 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Acco01g3172 931 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 681 763 - -
Acco01g3172 931 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Acco01g3172 931 MobiDBLite consensus disorder prediction 1 67 - -
Acco01g3172 931 Pfam Trehalose-phosphatase 614 828 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3172 Acco-ChrAcco01 49200668 49209258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3172 1 923 Trehalose Biosynthesis Gene Families AT1G78580 75.815 0.0 1439
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3172 01 49200668 49209258 Acco01g3172 01 49200668 49209258 ECH