Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3165 ATGCAGCAAGATCGGCCCAAGAAGGACGTTAAAGATTTGGACTTTTTCACTGAGTACGGGGATGCAAATAGATACAAGATTCTTGAAGTTATAGGGAAGGGAAGCTATGGAGTAGTATGTGCAGCAATTGACAAGTGCACTGGGGAAAAGGTTGCAATAAAGAAGATTCATGATATTTTTGAGCATATTTCTGATGCCATTAGAATTCTCCGCGAGGTCAAGTTGCTACGGCTATTAAGACACCCTGATATTGTTGACATTAAGCGCATCATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAATTGATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGACGACTTGACTCGTGAGCACCATCAGTTTTTCCTTTACCAGATGCTACGTGCACTGAAGTACATGCATACTGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATATTGGCAAATGCAAATTGCAAACTAAAAGTTTGTGATTTTGGACTGGCCAGAGTTGCATTCAATGATACCCCAACAACAATATTTTGGACAGATTATGTAGCTACAAGATGGTACAGAGCTCCAGAGCTATGTGGATCATTCTTTTCTAAGTACACACCAGCAATTGATATATGGAGCATCGGATGCATCTTTGCTGAGGTGCTTTCAGGAAAGCCGTTGTTCCCTGGTAAAAGCGTTGTACATCAACTAGATTTGATTACTGATCTTCTTGGGACACCATCACCGGAAACTATTACTGGAGTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGAAATGAGTAAAAAATCTCCTGTCCCATTTGAACAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTATTGCAAAGACTTCTGGCATTTGATCCTAAGGATCGGCCAACTGCTGAGGAGGCACTAGCTGATCCTTACTTTAAGGGCCTGTCCAAGGTCGAGAGAGAACTATCTTGTCAGCCAATTTCAAAGCTGGAATTTGAGTTTGAGAGGCGAAGGGTGACTAAGGAGGATATTAGGGAACTAATATACAGGGAAATACTGGAATATCATCCTCAGTTGCTTAAAGATTACATGAATGGAACTGAAAGCACAAATTTCCTCTGCCCCAGTGCAATTGGTCAATTCAGAAAGCAATTTGCTTATTTTGAGGAAAATGGTGGTAAAAGCGGCCCAGTCATACCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGCCCAATTCCTCCTTATAAACATGGCGCTGCATATGAGAACAAGCAAGTACCAGTAGAGGCATCTAAGAATTTTAGAGCAACAGAGTCAAATTCTGAAAGTCATTTAAGGGGTTCACGACCTCCTCCAAGGGTTCCGCCAGCCAAACCAGGAAAAGTTGTAGGGCCAGTTCTACCCCCTGAGAATGGGGTGAATATGAAAAACAACTATGATCCAAGAATCTTGAGCAAAAATGGTGTTCCCCCTTCTGTCTCTCCCCAGTGTTCCTTTAGGGGTCAACCCACAAACCCTGCGAAGATTGTGCCAGCACCGTGCAGGGATCAGTCACAGGGAAAACACCCATCCCATCAGCAGGGTAACTCACTGGCCAGACAAACTATTGACCTCAACACCAACCCTTACTTTCAACAATCCAAGGTAGACAACATAAATGATGCTGTCACCACAATGGATGCTAAGTTGCTGCAGGCACAGTCTCAGTTTGGTGCTGTTGGTGCTGCTGCAGTGGCCATTGCAGCTCATAGACATCCTTCTGGGCCTTTTTAG 1803 0.4332 MQQDRPKKDVKDLDFFTEYGDANRYKILEVIGKGSYGVVCAAIDKCTGEKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLSGKPLFPGKSVVHQLDLITDLLGTPSPETITGVRNEKARKYLTEMSKKSPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSKVERELSCQPISKLEFEFERRRVTKEDIRELIYREILEYHPQLLKDYMNGTESTNFLCPSAIGQFRKQFAYFEENGGKSGPVIPPERKHVSLPRSTVHSSPIPPYKHGAAYENKQVPVEASKNFRATESNSESHLRGSRPPPRVPPAKPGKVVGPVLPPENGVNMKNNYDPRILSKNGVPPSVSPQCSFRGQPTNPAKIVPAPCRDQSQGKHPSHQQGNSLARQTIDLNTNPYFQQSKVDNINDAVTTMDAKLLQAQSQFGAVGAAAVAIAAHRHPSGPF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3165 600 MobiDBLite consensus disorder prediction 459 473 - -
Acco01g3165 600 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Acco01g3165 600 FunFam Mitogen-activated protein kinase 15 119 - -
Acco01g3165 600 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3165 600 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3165 600 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Acco01g3165 600 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Acco01g3165 600 MobiDBLite consensus disorder prediction 445 539 - -
Acco01g3165 600 MobiDBLite consensus disorder prediction 499 513 - -
Acco01g3165 600 MobiDBLite consensus disorder prediction 397 428 - -
Acco01g3165 600 FunFam Mitogen-activated protein kinase 111 339 - -
Acco01g3165 600 CDD STKc_TDY_MAPK 24 361 - -
Acco01g3165 600 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco01g3165 600 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 364 - -
Acco01g3165 600 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Acco01g3165 600 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3165 Acco-ChrAcco01 49160126 49164372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3165 1 595 MAP Kinase Gene Family AT1G53510 70.310 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco01g3165 Pkinase 9.6e-65 CL0016