Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3140 ATGGATATTTTAGAAATTTCAATATTGCATCATGCTTGCATAGTGCTCCTGGGACTTTGGTTGCTATCTACCTTCAACTGGTGCCATCCCGTTGCTTATTTTGTGGCACTGATCTATCTCTACCTGGTTCATGAACGTTATGTCACCAGGCTGCGGAGGAAGTTACAGTTTGAGGAGAAGAAACAAGCTAATCAAAGAAGGGTGCTTTCTGATTCTGAATCAGTGAGGTGGTTGAACCATGCTGTTGAAAATATATGGCCCATATGTATGGAACAAATTACCTCTCAGAAGATTTTGCTTCCAATCATACCTTGGTTCTTGGAGAAGTACAAACCTTGGACTGCTAAAAAAGCCATGGTTCAGCACCTGTACCTGGGGAGAACCCCCCCTTTATTTACTGAGATGAGGGTGCTTCGTCAAAATAGCGATGACCACTTGGTTCTGGAATTAGGAATGAATTTTCTTACAGCTGATGATATGAGTGCAATAATAGCTGTAAAACTAAGGAAAAGATTAGGCTTTGGGATGCGGGCAAAGCTGCACATAACGGGTATGCATGTTGAAGGGAAGGTTTTGGTTGGGGTAAAATTTTGCCAAACATGGCCTTTCCTTAGTCGTTTGCGTGTATGCTTTGTTGAACCTCCATACTTCCAAATGACTGTTAAGCCTATATTTACTCATGGGCTTGATGTGACAGAAGTTCCTGGGATTGCTGGATGGCTAGATAAGCTTTTGTCTGTCGCGTTTGAACAGACTCTTGTTGAGCCTAATATGCTGGTTGTTGATGTCGAGAAATTTGCTTCACCTGAGCCTGAGCCTTGGTTCTCTGTCAATGAGAAGGAGCCTGTTGCTTATGTCTTTGTGGAAGTTATTGAAGGATCTGAGATGAAGCCATCGGATCTAAATGGGTTAGCAGATCCATACGTAAAAGGTCATTTAGGTGGCTACAGATTCAGAACAAAGATTCAAAGGAAAACTCTTAATCCAAAATGGCTAGAAGAATTTAAAATCCCCATTGTAACGTGGGAGTATGCTAATGTGTTGGCTATTGCAGTTTCTGACAAGGACCACTTTGTTGATGATAGCCTCGGAGACTGCTCTGTCAACCTTAGCGATTTGAGGGGTGGCCAGAGACATGATATGTGGTTACCTCTTCAGAATATTAAAACTGGAAGGTTGCACCTTGCTCTAACTATTCTTGAAGACAATGCAAAGGGGGTTGATAAAACATTTGACAAGGAAGCAACGAATGCTGAACACAAAAGGAATTCCTTTGCAAATGAGACTGATAATAAAAGTTCATTCTCATCTGTTTCGTCAGACAAATCCCGAAAAGTTACAGATAACTATGAGCCTATAGATGTTGAAGGGCAAAAGGAGACCGGAATTTGGGTTCATCAACCAGGTAGTGAAGTGTCCCAAAAATGGGAACCTAGAAAAGGGAGGAGCCGACGCATTGATACTGAAATTCACAGGGAGCCTAATGATTTATGTGGAAGTTTTAATTCAGCGGCTTCTGGATCCTCGAACAATGACAGCAGCAGTCCTGATGATAATCCAGAGGATAAACACAGATTGAAATCAATCAGGAAGGGACTGCATATGATTGGGTCATTATTTCGAAAGGGCCCAAAGAATGAGCCTCCAACACCAACATCAGCACGTAGTGTTGGAGGGGCTGTTCCATCACCATACACAAACATTAAGGCTGAGAATGCCAAAAAGATTGGTGTGAACTTTGTTATGGAGGATAACAATTCTGGGTTTGCCCCTGCTGAGGTTCAGATAGAAGGAACATCCGCTGAAAGAAATGGCTCAGAGAGCCCAGACAAGGGTAATGCCAAAGATAAGGCGAAGAATATGCTGAAGCGTGCAGCAGGGAAATCAGCTCGTGGCCTAAAGCATGTGATTTCCAATAAATCAAGAACATCTGAAGTTGACTCATCAGGGGTACTTGAAACAAGAATCTCAGAAGAATCTGACTCTTCTGATGATGATTCCCCTTCAGTTCAATCACCCTTAAATGGAAGAATTCCCGTTGCTTCCAAGCCCGTTTCTTTCAACAATGAACCCTTCAATCCCAGTGAGAATGTGGTTCAGACATGTTCGCCTGACGATACTTTGGGCAATGAGGTTCTGATAAAGAAGCCGGGTATTGCAGAAGAGCCTTTAAAGCATGGCAGCCCTGAGAAATCTTCAAAAGATTATGTTGAAACAGGGCATGACAGAGTGAGTGCTGGCACGTAA 2247 0.4272 MDILEISILHHACIVLLGLWLLSTFNWCHPVAYFVALIYLYLVHERYVTRLRRKLQFEEKKQANQRRVLSDSESVRWLNHAVENIWPICMEQITSQKILLPIIPWFLEKYKPWTAKKAMVQHLYLGRTPPLFTEMRVLRQNSDDHLVLELGMNFLTADDMSAIIAVKLRKRLGFGMRAKLHITGMHVEGKVLVGVKFCQTWPFLSRLRVCFVEPPYFQMTVKPIFTHGLDVTEVPGIAGWLDKLLSVAFEQTLVEPNMLVVDVEKFASPEPEPWFSVNEKEPVAYVFVEVIEGSEMKPSDLNGLADPYVKGHLGGYRFRTKIQRKTLNPKWLEEFKIPIVTWEYANVLAIAVSDKDHFVDDSLGDCSVNLSDLRGGQRHDMWLPLQNIKTGRLHLALTILEDNAKGVDKTFDKEATNAEHKRNSFANETDNKSSFSSVSSDKSRKVTDNYEPIDVEGQKETGIWVHQPGSEVSQKWEPRKGRSRRIDTEIHREPNDLCGSFNSAASGSSNNDSSSPDDNPEDKHRLKSIRKGLHMIGSLFRKGPKNEPPTPTSARSVGGAVPSPYTNIKAENAKKIGVNFVMEDNNSGFAPAEVQIEGTSAERNGSESPDKGNAKDKAKNMLKRAAGKSARGLKHVISNKSRTSEVDSSGVLETRISEESDSSDDDSPSVQSPLNGRIPVASKPVSFNNEPFNPSENVVQTCSPDDTLGNEVLIKKPGIAEEPLKHGSPEKSSKDYVETGHDRVSAGT 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3140 748 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Acco01g3140 748 SMART C2_3c 285 382 IPR000008 -
Acco01g3140 748 MobiDBLite consensus disorder prediction 418 524 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 716 748 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 499 515 - -
Acco01g3140 748 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Acco01g3140 748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 399 IPR035892 -
Acco01g3140 748 MobiDBLite consensus disorder prediction 608 623 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 473 494 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 636 651 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 539 566 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 718 741 - -
Acco01g3140 748 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 698 - -
Acco01g3140 748 Gene3D C2 domain 274 401 IPR035892 -
Acco01g3140 748 MobiDBLite consensus disorder prediction 428 443 - -
Acco01g3140 748 MobiDBLite consensus disorder prediction 591 697 - -
Acco01g3140 748 CDD SMP_SF 95 262 - -
Acco01g3140 748 Pfam C2 domain 286 385 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3140 Acco-ChrAcco01 48888115 48894107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3140 281 421 Lipid Metabolism Gene Families AT3G61300 28.767 4.35e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3140 01 48888115 48894107 Acco01g3140 01 48888115 48894107 ECH