Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3126 ATGCCCTGTGAAGCTCATTCCCGTTCTTTGAATGAGGAAATTGGTAGCGGCGCAGATGGGGATGCTTCAAATGATTTGAAAAGAAGAAGCGTTGGGACTTCTTGTCCTTTGGAAAGGAGAAAGGAGGAATACAAGATCTGGGGCTCGTTGAATTTGGAATCACTGACTTTGGATTCCGAGAACAGAGCAAGGTTTGCTCCAGCAAGGATAACTGCTGTTCAATTTTTTCCTTCAAGCAATGTGAAGATGATCGCGGCAGGTGATAAATTTGGAAATCTTGGATTCTGGAATTGTGATTCTAGCAATAATGAAGGACACAAAAAAAGGAGGTTTTTTGATCTGGTGCTTGAAAGTGGTGAAACTTTGAACTCTCTCTCACAGCTAAACAATGATGCAAACTGCCTATATTTTGGCGAAGGTCCTGGAGGTTTGAACATTTGGGACAGTAGGATTAATACTATAGATTTTGACCCAGAAAACCTTCACATTATGGCAACTAGTTCATCTGATAGATCTGCTTGCACTTGGCATCTGAGTGGATTTGGGTGTGATCATATTCAGGTTATATCTCTATGGATTCAATTCAAAATAAGGTTTATTAGTGCTAATGTAATCATGGAAGTGATGTTAGTCATTAAGTATTGCCATGATATGGGAGTTGGGCACAGAGATATCAAACCTGAAAATATCCTTCTAAAAGCAACTGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAATATCTGATGGTCAGAACTTGGCTGGTTTAGCTGCTTCCTGTAATACTCAGTGA 798 0.401 MPCEAHSRSLNEEIGSGADGDASNDLKRRSVGTSCPLERRKEEYKIWGSLNLESLTLDSENRARFAPARITAVQFFPSSNVKMIAAGDKFGNLGFWNCDSSNNEGHKKRRFFDLVLESGETLNSLSQLNNDANCLYFGEGPGGLNIWDSRINTIDFDPENLHIMATSSSDRSACTWHLSGFGCDHIQVISLWIQFKIRFISANVIMEVMLVIKYCHDMGVGHRDIKPENILLKATGKIKLADFGLAMRISDGQNLAGLAASCNTQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3126 265 MobiDBLite consensus disorder prediction 1 29 - -
Acco01g3126 265 SUPERFAMILY WD40 repeat-like 68 190 IPR036322 GO:0005515
Acco01g3126 265 Gene3D - 61 190 IPR015943 GO:0005515
Acco01g3126 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Acco01g3126 265 PANTHER UNCHARACTERIZED 47 104 - -
Acco01g3126 265 ProSiteProfiles Protein kinase domain profile. 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3126 265 Pfam Protein kinase domain 202 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3126 265 SUPERFAMILY Protein kinase-like (PK-like) 203 256 IPR011009 -
Acco01g3126 265 Gene3D Transferase(Phosphotransferase) domain 1 191 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3126 Acco-ChrAcco01 48775516 48776634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3126 198 253 AGC Kinase Gene Family AT3G10540 51.786 2.15e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco01g3126 Pkinase 1.8e-16 CL0016