Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3094 ATGGCAATAGGGCCGGATTGCAACCTCCAAAAACGGTTTTGCTTGATGCTAATATTTTGTTTTGGCATCGTCCTTGTAATTTCGATTAATGAAGATGGTTCACATCTTTTGGAGTTCAAGGCTTCTCTTGTTGACCCACAAAATTATCTTCACAACTGGAATTCTTCTGATTTTACTCCTTGCAGTTGGAAAGGTGTGCATTGTGATGATTCAATGGTAACTTCCGTCAATCTTCATCAGCTCAATCTGTCTGGTGCTTTATCTCCTAGCATCTGTAAACTTCCACGGCTAGTTGAGTTGAATGTATCGAAAAATTTCATTTCCGGTCCTATTCCTGTGGATTTTGTTAACTGTCGTAGTTTAGAGATATTAGACCTTTGCACAAATAGGTTCCATGAAGAACTTCTGATTCCTTTCTGCAAAATCACCACACTAAGAAAGCTTTACCTCTGTGAAAATTATATGCATGGCGGAGTTCCTGAAGAGATTGGGAATTTAACTTCACTTGAAGAGCTAGTCATTTATACAAACAACTTAACTGGAAGAATTCCCACATCAATCGGTAAATTGAAGCAGCTTAAGATCATCAGGGCAGGAGTTAATGACATCTCAGGTCCAATACCGGTGGAAATAAGCCAGTGCGAGAGCTTGCAGATATTAGGATTCTCACAGAATCAGCTTGAAGGGTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACTGAGTTAAATCTGTGGCAAAACTATTTATCTGGTGAGATTCTTCCTGAGATTGGAAACCTAAGTAGCCTGCAATCTCTTGCTTTGCATCATAATTCATTTGTTGGGTCTCTTCCCAAGGAGCTTGGAAAGTTATCAAATTTACTAAGGTTGTATATATACACTAACCGCTTGAATGGCTCAATCCCGGTGGAGCTAGGGAACTGCACAAATGCTATTGAGATAGATCTGTCCGAAAACCGTTTAACTGGAAATATTCCCAAAGAGTTGGGTCAGATCTCCAGTCTTACATTGCTTCATCTATTTGAAAACCTTCTGCAGGGAGAGATACCTCAGGAGCTTGGGAAGTTAAAGCTGTTACAGAATTTAGACCTGTCTATAAATAACTTAGCAGGTACAATTCCACTGGTGTTTCAAAATCTTACATACATGGAAGATTTGCAGCTATTTGATAATCAACTTCAGGGTAAAATTCCTCCTTATCTTGGATCTAATAGCAACCTTAAAGTTCTTGATATATCTACAAATAATCTTGTCGGTATGATGCCTCCCCATCTTTGCCGCAACCAGAAATTGCAGTTCCTGAGCCTTGGGTCAAATAAGTTGCTTGGCAATATTCCAGATGACCTGAAAATGTGCAAGCCTCTTGTGCAGCTAATGCTGGGAGACAACCAACTGACAGGAAGCTTCCCTGTTGAATTACATGAACTTCATAATCTTTCTGCTCTTGAACTTCATCAGAACCGATTCTCAGGACTAATAGACCATGGGATAGGTCGACTCATAAACTTAAAGAGGCTCCTCTTATCAGATAATTATTTTGTAGGCTATCTTCCTCCTGAGATTGGGAATTTAACACAGCTTGTCGCATTCAACATTTCCTCTAATTTTCTCAGTGGAAGTATACCTCATGAGTTGGGAAACTGCATCAAACTCCAGAGGCTTGATCTGAGTAGAAATGAGTTCACTGGTGATCTTCCAGATGATATCGGAAAGCTGGTGAATCTGGAGCTGTTGAAACTTTCAGATAATAGACTATCTGGAACAATACCAGGTGCTTTAGGGGAGCTTAAACGTCTCACAGATTTGGAACTAGGGGGCAACTTATTTGTTGGGAGCATTCCTTTTCATTTAGGACAATTAGCTGCTCTTCAGATTGCTCTTAACTTGAGTTATAATAAACTTTCTGGTACAATTCCTGACAGCCTTGGGAGTTTGCAAATGTTGGAAGGTCTTTATTTAAATGGCAATCAGCTTGTTGGCGAAATCCCTGCATCAATTGGTGACCTTCCCAGCCTCTTAGTGTGCAATGTTTCCAACAATAAACTGGTAGGGGTCATTCCAGACACACCAGCATTTCGTAAGATGAATTTTACAAATTTTGCAGGAAACAATGGGTTGTGTCGAGTAGGTCCATATTATTGTCATCCATCTCATACTCCTATCTGGACCAGCGATGGTTCATCGAAGAAAAAGATAGTGAGCATTGTTTCTGCGGTGGTGGGATTTGTTTCTCTTATTTTCATTGTCTGTATATGTTGGGCCATGAAACGCCGTAGCCCTTCTTTTGTCTCAATTGAAGGGCAATCCAAGCCTCAAGTCCTAGATAATTATTACTTTCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGGAGCCACCAGCAATTTTTCAGAAGCATTAGTCATAGGAAGAGGAGCTTGTGGAACTGTCTACAAGGCTGTTCTGACTGATGGTGAGGTGATAGCTGTCAAAAAGTTGAATTCTCGTGGAGAAGGAGCAAATGTGGACAGAAGTTTCCTTGCTGAAATTTCAACTCTGGGAAATATCAGGCACAGAAATATTGTGAAGCTGTTTGGATTCTGTTGTCATGAGGATTCTAATATTCTCTTGTATGAATTCATGGAAAATGGCAGCCTTGGTGAACAACTTCATTCAGATCCAAACACGTGTATATTGGGTTGGAGTAGCCGCTACAAAATTGCCCTTGGAGCAGCAGAAGGCTTGTGCTATCTTCATTATGATTGTAAACCTCAAATCATCCATCGTGATATAAAGTCGAACAACATATTGCTCGATGAAGTGTATCAAGCACATGTTGGAGACTTTGGGCTGGCCAAGCTGGTGGACTTTTCATACTCCAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATATATAGCTTCGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAGCAGGGTGGTGATCTAGTTACTTGGGTGAGGAGATCAATTCAAGCGTCAGTACCGACATCCGAATTATTTGATAAAAGATTAAATCTGAGTGCGCAAAAAACAATCGACGAGATGTCTCTTGTTCTCAAAATTGCTCTGTTTTGCACCAGCACATCCCCACTTAATAGGCCGACAATGAAAGAGGTCATAGCAATGTTGATTGATGCTAGGGAGTATGTCAACAATTCTCCATTGACTCCTACATCTGAATCCCCACTAGGTGAAGACGCTTCTTCCAAAGGTGATCTGGAATTGTAA 3312 0.4085 MAIGPDCNLQKRFCLMLIFCFGIVLVISINEDGSHLLEFKASLVDPQNYLHNWNSSDFTPCSWKGVHCDDSMVTSVNLHQLNLSGALSPSICKLPRLVELNVSKNFISGPIPVDFVNCRSLEILDLCTNRFHEELLIPFCKITTLRKLYLCENYMHGGVPEEIGNLTSLEELVIYTNNLTGRIPTSIGKLKQLKIIRAGVNDISGPIPVEISQCESLQILGFSQNQLEGSIPRELQKLQNLTELNLWQNYLSGEILPEIGNLSSLQSLALHHNSFVGSLPKELGKLSNLLRLYIYTNRLNGSIPVELGNCTNAIEIDLSENRLTGNIPKELGQISSLTLLHLFENLLQGEIPQELGKLKLLQNLDLSINNLAGTIPLVFQNLTYMEDLQLFDNQLQGKIPPYLGSNSNLKVLDISTNNLVGMMPPHLCRNQKLQFLSLGSNKLLGNIPDDLKMCKPLVQLMLGDNQLTGSFPVELHELHNLSALELHQNRFSGLIDHGIGRLINLKRLLLSDNYFVGYLPPEIGNLTQLVAFNISSNFLSGSIPHELGNCIKLQRLDLSRNEFTGDLPDDIGKLVNLELLKLSDNRLSGTIPGALGELKRLTDLELGGNLFVGSIPFHLGQLAALQIALNLSYNKLSGTIPDSLGSLQMLEGLYLNGNQLVGEIPASIGDLPSLLVCNVSNNKLVGVIPDTPAFRKMNFTNFAGNNGLCRVGPYYCHPSHTPIWTSDGSSKKKIVSIVSAVVGFVSLIFIVCICWAMKRRSPSFVSIEGQSKPQVLDNYYFPKEGFTYQDLLGATSNFSEALVIGRGACGTVYKAVLTDGEVIAVKKLNSRGEGANVDRSFLAEISTLGNIRHRNIVKLFGFCCHEDSNILLYEFMENGSLGEQLHSDPNTCILGWSSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVYQAHVGDFGLAKLVDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPTSELFDKRLNLSAQKTIDEMSLVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVNNSPLTPTSESPLGEDASSKGDLEL 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3094 1103 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 380 1072 - -
Acco01g3094 1103 SMART serkin_6 798 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3094 1103 SUPERFAMILY L domain-like 31 307 - -
Acco01g3094 1103 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 183 - -
Acco01g3094 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 875 - -
Acco01g3094 1103 ProSiteProfiles Protein kinase domain profile. 798 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3094 1103 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Acco01g3094 1103 SUPERFAMILY RNI-like 315 690 - -
Acco01g3094 1103 Gene3D Transferase(Phosphotransferase) domain 1 876 1085 - -
Acco01g3094 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 876 1088 - -
Acco01g3094 1103 SUPERFAMILY Protein kinase-like (PK-like) 774 1071 IPR011009 -
Acco01g3094 1103 FunFam Predicted protein 184 280 - -
Acco01g3094 1103 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 375 - -
Acco01g3094 1103 Gene3D Ribonuclease Inhibitor 291 379 IPR032675 -
Acco01g3094 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Acco01g3094 1103 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Acco01g3094 1103 Pfam Leucine rich repeat 552 610 IPR001611 GO:0005515
Acco01g3094 1103 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Acco01g3094 1103 Gene3D Ribonuclease Inhibitor 381 720 IPR032675 -
Acco01g3094 1103 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Acco01g3094 1103 MobiDBLite consensus disorder prediction 1081 1103 - -
Acco01g3094 1103 SMART LRR_typ_2 647 671 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 358 381 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 574 598 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 478 501 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 262 286 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 502 526 IPR003591 -
Acco01g3094 1103 SMART LRR_typ_2 166 190 IPR003591 -
Acco01g3094 1103 Gene3D Phosphorylase Kinase; domain 1 765 875 - -
Acco01g3094 1103 Pfam Protein kinase domain 803 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3094 Acco-ChrAcco01 48471379 48475036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3094 46 1076 Receptor kinase-like Gene Family AT1G73080 39.171 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g3094 Pkinase 1.8e-45 CL0016