Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3092 ATGGATGCATTTTCTTATCAGAATTCTGGACAATTGTACTTATCAAATGATCCACCAAGCGGCAAATTTGATTCACTAGAAAGTTCAACAATGGCAGGTGTTGAATCTGAAGTTCATGATAGCCAAAGTGACGAATTTAATCGTAAAAGACGAGGCTTTGGAGCAAATAGTGTCCAATTCGCCGACCCAGTTGTAAGCAATGCGTTCGATGGGCAGTCCATTTTGGGGCATTCCTTAACGCCCCCTGATTTGGTCATATGTGCTGCTTCACCGGATATTACCAGTAACAGCTATGTGGAGTCCCCTGAGTTTTTGGAGAACAAAATTCATCGGAAAGTGGCTATGGAGCTTTCTTTGGAGAATGGGATCAATGAATCTGATTCTGGAACTGACAATATCCAGAAGATCCCAGCTGTTAAATTTTCTAATTTTTGCCAAACTTTTAAAGAACTGTCTCCTGAATCCTCCTTTGAGCTTCCTCCTCCCCCTATAATACAGTATGAGCCATCACTAGTGACCCCTTCGGGAGAAAATAAGTTGGTAGGATATATTGAAGTGTCTCAAGAAGAAGAATTAGAGACTTCAAATGATGCCGGAGATATTGGGATGGAAGATGAGTTTCTGAAGCTGAAAAGAGAGTTTGATAGTCAGAAAAAGGATCTAGCTGAAACAAGGAGGGTTTTGAAGGAGCTGAAGAAGGAGAATCAACAGAAGGATAGGGAATGCCAAGAAGCTTGCCAGTCCTTAAAAGAGCTTCAGAACGAGCTCATGCGCAAGTCTATGCATGTTGGATCTTTGGCTTTTGCTATTGAGGGGCAAGTGAAGGAGAAAAGTAGGTGGTTTTCAGCACTGAGAGACTTGATGAACAAAATGAAGATTATGAAAATGGAGCACATCAAACTTTCAGAGGAAACAGAAACATATAAGAAGTATCTTGCAGATATGAGTGAAGTGGAGCGAACTATCATGTCCAAGATAAATGAGCAACAGGAGTCACATGAAGACCTCAAGTCTAAGTACCTTGAAGGGGCTAAGCAGCAAAAAGAACTTTATAGTAAGGTTTTGGAGTTGAGAGGAAACATTAGGGTCTTCTGCCGCTGTAGACCTCTAAATGCCAAAGAGATAGCAGCAGGACTTACTATGGCCATAGGTTTTGAATCTGCTAAAGATGGTGAGCTTACTGTAATGTCAAATGGGGCTCCTAGAAAGACTTATAAGCTTGATTCTGTTTTTGGACCCCAAGCTGATCAAGCCGACATCTTTGAAGAGATGGCGCCATGTGCGACCTCAGTTCTAGATGGTTTCAATGTGTGCATATTTGCCTATGGTCAGACTGGGACAGGAAAAACCTTCACAATGGAGGGTACAAAAGAGGCTCCTGGCGTTAATTTCAGGACCCTGGAGAAAATGTTTGACATAATCAAGGAGAGACAGAAAATATATCACTATGATGTCTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATTAGAGATTTGTTGGTTTCAGGAAGCCAGCCTGGAATATCCACAAAAAGGCTTGAAATAAGGCAAGCAGGTGAAGGAATAAACCATATACCAGGATTGGTTGAGGCACATGTGAACAATATGAGTGAAGTCTGGGATGTCCTACAAACTGGTAGCAATGCAAGAGCTGTTAGCTCAACCACTGCCAATGAACACAGCAGCCGTTCCCACTGCATTCACTGTGTTATGGTCAAGGGGGAAAATCTGCTAAATGGTGAGTGCACAAGAAGCAAGCTATGGTTAGTAGACCTTGCAGGAAGTGAGAGAGGGGCAAAGACAGAAGTGCTCGGTGAACGGCTAAAGGAGGCACAAAATATTAACAGGTCTCTCTCTGCATTAGGGGATGTTGTATCAGCCCTTGCGACAAAAAACCAGCACATTCCTTTCAGAAATTCCAAGCTTACACATCTGCTGCAAGACTCTTTAGGAGGAGATTCAAAGACATTCATGTTTGTACAGATCAGCCCAAATGAAAGTGATTTGAGTGAGACAATTTGCTCTCTGAATTTTGCCAGTAGAGTGAGAGGAATAGAGTTGGGCCCAGCAAAGAGGCAAATAGACACTACTGAACTTCTGAAATATAAATTCATGGCTGAGAAAACAAAACAAGAGGCCAAGATGAAGGATTTTCAAATCAAGAAGATGGAGGAAACAATTCATGGATTAGACTCAAAGATAAAAGAAAGAGATGCTAGAACCAAAGTTATGCAAGAAAAGATCAAGGAACTGGAATCACAACTTCTGATTGAGAGAAAGTTAGCAGCAGCTAGTCAAAATGTTGATACAGAGAAAGCTGAGAAGCATCAAGAAGAGAAAAATAAAACACCTTTGAGACCATCACTTGCAAATCAGCCAGTAGAAAGTAAGAAGAGCTTTAACGATTACCAAGAAAATTTAACTCGCCCACGTACAGAGAATAACATTCTAAAACCATCACTTCCCTTTCCTACAATTGAGAACTCTGCCATGAACAGTGATTTCTATTCTGAGAAAGAAAATATCCCAGAGATGGCTGAAAAACCCATACTTCCAAAAAGAGCTGGTAGAGTTTCTATCTGCCCTATGACACCTAGTAATTTTTCCGCCAGTACTTCAAGGAGAAAGTCCTTGATTCCACTCCCAAGTGCAGTCCATCAACTAATGATATATCGAGCTGATCAGAAGGAAGTCAATAGTGAATCAGAAAACAACTGCTTGCCATTGCAGAGGCAATGTGAGAGTCCAAAAGAAATCAGAGGTGAAGGTAGGAAGAAAGGAAGCAAGCTAAGAAGAAGCCTACAAAAGAAAAATCAGGAAAAGTCACAAACACAGAAAAACATAAAAAAGGTTGGTGTTAATGTAGGGATGGAGAAAGTTAGAGTATCCGTGGGGAGTCGAGGGAAAATGGGAAAGGGAAAAAGTGGAACTAAAGAAGGGCAGCAGCAGAAGAACAGTCAAAAGGAAAAGGAAAGGAGATGGAATGTTGGAACTTTGGTGAAAACCGTTATATGA 3018 0.4122 MDAFSYQNSGQLYLSNDPPSGKFDSLESSTMAGVESEVHDSQSDEFNRKRRGFGANSVQFADPVVSNAFDGQSILGHSLTPPDLVICAASPDITSNSYVESPEFLENKIHRKVAMELSLENGINESDSGTDNIQKIPAVKFSNFCQTFKELSPESSFELPPPPIIQYEPSLVTPSGENKLVGYIEVSQEEELETSNDAGDIGMEDEFLKLKREFDSQKKDLAETRRVLKELKKENQQKDRECQEACQSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSALRDLMNKMKIMKMEHIKLSEETETYKKYLADMSEVERTIMSKINEQQESHEDLKSKYLEGAKQQKELYSKVLELRGNIRVFCRCRPLNAKEIAAGLTMAIGFESAKDGELTVMSNGAPRKTYKLDSVFGPQADQADIFEEMAPCATSVLDGFNVCIFAYGQTGTGKTFTMEGTKEAPGVNFRTLEKMFDIIKERQKIYHYDVSVSVLEVYNEQIRDLLVSGSQPGISTKRLEIRQAGEGINHIPGLVEAHVNNMSEVWDVLQTGSNARAVSSTTANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERGAKTEVLGERLKEAQNINRSLSALGDVVSALATKNQHIPFRNSKLTHLLQDSLGGDSKTFMFVQISPNESDLSETICSLNFASRVRGIELGPAKRQIDTTELLKYKFMAEKTKQEAKMKDFQIKKMEETIHGLDSKIKERDARTKVMQEKIKELESQLLIERKLAAASQNVDTEKAEKHQEEKNKTPLRPSLANQPVESKKSFNDYQENLTRPRTENNILKPSLPFPTIENSAMNSDFYSEKENIPEMAEKPILPKRAGRVSICPMTPSNFSASTSRRKSLIPLPSAVHQLMIYRADQKEVNSESENNCLPLQRQCESPKEIRGEGRKKGSKLRRSLQKKNQEKSQTQKNIKKVGVNVGMEKVRVSVGSRGKMGKGKSGTKEGQQQKNSQKEKERRWNVGTLVKTVI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3092 1005 MobiDBLite consensus disorder prediction 1 37 - -
Acco01g3092 1005 Pfam Kinesin motor domain 366 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 FunFam kinesin-like protein KIN-14R 305 688 - -
Acco01g3092 1005 MobiDBLite consensus disorder prediction 910 1005 - -
Acco01g3092 1005 CDD KISc_C_terminal 358 688 - -
Acco01g3092 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 724 IPR027417 -
Acco01g3092 1005 MobiDBLite consensus disorder prediction 1 46 - -
Acco01g3092 1005 MobiDBLite consensus disorder prediction 770 784 - -
Acco01g3092 1005 ProSiteProfiles Kinesin motor domain profile. 360 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 PRINTS Kinesin heavy chain signature 556 573 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 PRINTS Kinesin heavy chain signature 636 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 PRINTS Kinesin heavy chain signature 587 605 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 PRINTS Kinesin heavy chain signature 434 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 Coils Coil 284 304 - -
Acco01g3092 1005 Coils Coil 214 255 - -
Acco01g3092 1005 Gene3D Kinesin motor domain 302 688 IPR036961 -
Acco01g3092 1005 Coils Coil 735 755 - -
Acco01g3092 1005 ProSitePatterns Kinesin motor domain signature. 586 597 IPR019821 GO:0003777|GO:0005524|GO:0007018
Acco01g3092 1005 PANTHER KINESIN-LIKE PROTEIN KLP-3 186 940 IPR027640 GO:0003777|GO:0007018
Acco01g3092 1005 SMART kinesin_4 358 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco01g3092 1005 MobiDBLite consensus disorder prediction 766 798 - -
Acco01g3092 1005 Coils Coil 762 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3092 Acco-ChrAcco01 48446745 48452611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3092 335 717 Calmodulin-binding Proteins AT5G65930 41.558 2.52e-79 281