Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3091 ATGCATATAATGGTGGGCAACGCTCAAGGAGCAATGGCTTATCTCGCTTCCCCTGTCAGTTTGGGTGGTTTAGTTGGAGTGGGTCCCTCTGGGAGGACCCACTCTATTGGAAGGAGAGTTTCTCTTTCTGGAGCAAACTTTAAAGGTAGAGGAAAGACATGGCATTTTGCCTCCTTGTCCCTTTGTAGATATTCAGTGACTTCAACTGATTTCATATTGGACCAAGGCAATGCAGTGGCCCTTGACTCTAACAGTGATAGAGGAAGTACGGGCAATGGAGATAATAATGCTGGTTTTGTCCTGAAGCCACCTCCAAAGCCGGTATTGAAGTCTTCAGAGACCAAGGGTAACTCCATTTTAGGTGCAAATTCTGAAGGATGGGATCCCTCTAAAGCTAAGCAATCTGGTAATGAAAAGTTAGATGATGTTGAGGAAAGGAATAAGGTGATTGAGTCACTGGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGAAAATTCAAAGTTGGATGACAAAAGAAATAATGGACCAGTAAGTAAACCGGCAGTATCTAATACAATCGCTAATCCTGACACTGATAAATTGGCAAACTCAACAACAAACCAGCAGTCTAGAACTGTGAAGAGCGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCAGAAGGTTGTTAGAGAAGTGCCCAAGCCCCAAACTAACAGTGGAGGAGGCAAATATCAAAGAGAGGGGTGGGGAAAGGCGGCATTTCAGTCTCCTACTGCTCCACGAGCTCCTCAACCTATGCTACAAGCTAAACCATCTGTAGCCCCCCCACCCATCAAAAAACCTGTTTTAAAGGACGATGGAGCTGCTGGCACACGTGTTAAAGATAAAGAAAGGAAGCCAATTTTGATTGACAAGTTTGCTAACAAGAAACCAGTAGTCGACCCTATAATTGCTCAAGCTGTTCTAGCTCCTACAAAACCAGGAAAGGGCCCTCCTCCTGGAAAGTTTAAAGATGATTACCGAAAAAAAGGCGCCTCATCTGGAGGAGGACCAAGGAGAAGAATATTAGATGATCATGTCGATGAGATTCCTGGTGCTGCAACAGCAAGAAAAGGGAGGAGGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGACGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCAATCAGTGAAGGTGAAATCCTGGGTTCTCTATACTCCAAGGGGATCAAACCAGATGGGGTGCAAACTCTTGACAAAGACATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTCTTAGATGCTGATCCTGTTAAAGTTGAAGGATTGGTGAAGAAAAGGGAAATTCTAGATGAAGATGATCTTGACAAACTCAAAGATAGACCTCCTGTTATTACTATCATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGGTAGCTGCTTCAGAAGCGGGTGGGATTACGCAAGGAATTGGGGCATATAAGGTTCAAGTTCCTGTTGATGGCAAAATGCTGCCTTGTGTTTTTCTTGACACACCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGCGCAAGTGTAACGGATATTGCTATCATTGTTGTAGCTGCTGATGATGGAATTCGTCCACAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCAGGAGTACCCATAATTATGGCTATAAACAAGATTGATAAAGATGGAGCAAATCCGGACCGAGTCATGCAAGAGCTATCTTCAATTGGTCTAATGCCTGAGGAGTGGGGGGGTGACGTCCCAATGGTTCAGATAAGCGCCCTTAAAGGGGAGAATGTAGCTGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCAGATAGAAGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCTACTTTTATCGTGCAGAATGGCACCCTTAAAAGGGGAGACGTAGTAGTTTGCGGAGAAGCTTTTGGGAAGGTACGGGCTTTATTTGATGATGTTGGAAAACGTGTCGATTCAGCTACACCCTCTATGCCCATACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGACTCCCTTGTTGCTGCCTGTGAAAAGGCAGAGTCCCGTGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAGGCAGGGGATGGGAAGGTCACCCTTTCTTCTTTAGCTTCTGCAGTTTCGGCAGGAAAGCTTTCTGGATTAGACTTGCACCAACTAAACATTATATTGAAGGTTGATCTTCAGGGATCCATTCAAGCTATCAGACAAGCCCTACAGGTGCTCCCACAAGATAATGTCACCTTGAAGTTTTTGTTGGAAGCAACAGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGCTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAAAGTACCAGGTTCTGTAAAAACCTACGCAGAAAATAAGTTTGTGGAGATTAGATCATATAAAGTTATTTATGACCTAATTGATGATGTGAGAAATGCAATGGAAGGACTTCTGGAGCCTGTGGAGGAACAAATAACGTTTGGCTCAGCTGAAGTAAGGGCCACTTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGACGGAAAAGTATCGAAAGACTGTGGCATTCGAGTCATTCGTAGGGGAAAGGTGGTTCACATTGGAGTGCTTGATTCATTGAGACGAGTAAAGGAGAATGTGAATGAGGTAAGTGCTGGTCTAGAGTGTGGCATTGGTTTAGAAGATTATGACGACTGGGAAGAGGGAGATATTATCGAGGTGTTCAACAAGGTTCAGAAGAAGCGGACCCTTGAAGAGGCATCGGCTTCAATGGCTGCTGCAGTAGAAGAAGCAGGAGTATAG 3015 0.4461 MHIMVGNAQGAMAYLASPVSLGGLVGVGPSGRTHSIGRRVSLSGANFKGRGKTWHFASLSLCRYSVTSTDFILDQGNAVALDSNSDRGSTGNGDNNAGFVLKPPPKPVLKSSETKGNSILGANSEGWDPSKAKQSGNEKLDDVEERNKVIESLGEVLEKAEKLENSKLDDKRNNGPVSKPAVSNTIANPDTDKLANSTTNQQSRTVKSVWRKGDTVANVQKVVREVPKPQTNSGGGKYQREGWGKAAFQSPTAPRAPQPMLQAKPSVAPPPIKKPVLKDDGAAGTRVKDKERKPILIDKFANKKPVVDPIIAQAVLAPTKPGKGPPPGKFKDDYRKKGASSGGGPRRRILDDHVDEIPGAATARKGRRWSKASRKAARLQAAKDAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGSLYSKGIKPDGVQTLDKDMVKMICKEQGVEVLDADPVKVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYKVQVPVDGKMLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIMAINKIDKDGANPDRVMQELSSIGLMPEEWGGDVPMVQISALKGENVADLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAFGKVRALFDDVGKRVDSATPSMPIQVIGLNNVPIAGDEFEVVDSLVAACEKAESRAESLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIQAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAAASKAIILGFNVKVPGSVKTYAENKFVEIRSYKVIYDLIDDVRNAMEGLLEPVEEQITFGSAEVRATFSSGSGRVAGCMVTDGKVSKDCGIRVIRRGKVVHIGVLDSLRRVKENVNEVSAGLECGIGLEDYDDWEEGDIIEVFNKVQKKRTLEEASASMAAAVEEAGV 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3091 1004 Coils Coil 736 763 - -
Acco01g3091 1004 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 165 994 IPR015760 -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 164 290 - -
Acco01g3091 1004 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 653 IPR027417 -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 326 349 - -
Acco01g3091 1004 NCBIfam translation initiation factor IF-2 399 988 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Acco01g3091 1004 FunFam Translation initiation factor IF-2 785 890 - -
Acco01g3091 1004 ProSitePatterns Initiation factor 2 signature. 939 961 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Acco01g3091 1004 FunFam Translation initiation factor IF-2 474 652 - -
Acco01g3091 1004 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 477 650 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 CDD IF2_eIF5B 480 646 - -
Acco01g3091 1004 Hamap Translation initiation factor IF-2 [infB]. 30 986 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Acco01g3091 1004 PRINTS GTP-binding elongation factor signature 549 560 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 PRINTS GTP-binding elongation factor signature 585 594 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 PRINTS GTP-binding elongation factor signature 533 543 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 PRINTS GTP-binding elongation factor signature 481 494 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 Gene3D - 474 652 IPR027417 -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 177 209 - -
Acco01g3091 1004 Gene3D Translation factors 653 769 - -
Acco01g3091 1004 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 784 896 IPR036925 -
Acco01g3091 1004 SUPERFAMILY Translation proteins 893 986 IPR009000 -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 111 131 - -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 83 145 - -
Acco01g3091 1004 MobiDBLite consensus disorder prediction 317 349 - -
Acco01g3091 1004 Pfam Elongation factor Tu GTP binding domain 482 642 IPR000795 GO:0003924|GO:0005525
Acco01g3091 1004 Gene3D - 785 890 IPR036925 -
Acco01g3091 1004 FunFam Translation initiation factor IF-2 890 987 - -
Acco01g3091 1004 Gene3D Translation factors 891 987 - -
Acco01g3091 1004 SUPERFAMILY Translation proteins 653 736 IPR009000 -
Acco01g3091 1004 FunFam Translation initiation factor IF-2 653 771 - -
Acco01g3091 1004 CDD IF2_mtIF2_II 657 751 IPR044145 -
Acco01g3091 1004 NCBIfam small GTP-binding protein domain 479 640 IPR005225 GO:0005525
Acco01g3091 1004 Pfam Translation-initiation factor 2 785 878 IPR023115 -
Acco01g3091 1004 CDD mtIF2_IVc 896 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3091 Acco-ChrAcco01 48439334 48446350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3091 456 876 Eukaryotic Initiation Factors Gene Family AT1G76810 29.303 1.10e-27 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3091 01 48439334 48446350 Acco01g3091 01 48439334 48446350 ECH