Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3085 ATGAGATCGAGCGGTGACAAAGATAAAACTCGAGGCGTCAGCTTGCAATTGAACAACCTCCATCAGCGTCTTCTTCATGCATTGAGCCTAGGCACCAGATATTTTGACGAGAAGACAAACCAATGGAAATGGCAGAGCGCAAACATTGAAGTGCAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTATCTGGAGATGCACGGGTAGCACACCATACTGTTGTAAAGGATTCGGTTGCAGATATTTTGGGAGCATTATTGTGGATTCTTCAATGCAAAAGTAGACCCTTGTTATGTATGGCAGCAAATGTAGCAGTAAAGTTAGTTTGTGTTTTACCCAATTCAATATTGGAATCTTATATATTAGATCTAGTCTATGCTCTATCATCCTTGCTATCTTCACCTTTTGTAGAAGTTGCAATACCCTGCTCCACTTCTTTGAATTTAGTAATTTCAAATTTAAATGCCAGTAGTGCGAAGGCTGTGTGGGAGGTACTGAAACAAACAGAATGTGTCATTCATATTGTGGGCAATATACACAAATTTGTTGGAGGTGAAATTCCAATGAAAATTGAATATTTCGAACAGATGTGTTCACTTTTGGGCTCAATATTGTCGTGGTGGTCTCCGACTCGGTTTCCTGTATGGAATGATGTTAAACTGATAGATACTCTGTCAGATATGAATGCAAGGACAGATTTTTCCACCAAACTTGTAATCTTGAAGCTGTACACATCTCTAGCTTTATGTGGATCCGTGGCCAAAAAACTCATAGAGAATGGAGAAAACTTTCTACAAATGGTTGTGCAATCTATGGGAAAATCATACCCTGATACTGTGAGGATAGAAGGATTTAGGCTTGCTCAATGTCTGTTGAGATCCCAAGAGAATTGTTTGAAAGTGATGGATACATGCGGTGAAGCTCTTGTTGATGCCATAATTTTTGGGATGGAAGAAATCGAGATGCATTCTAGAAAATTTGTAAACAAGAATAGTTCTACATTAGTGGAAGCATGCAGATTGGCTTTAGTAACTCGTTGGGCAGGTGATCATCATATTTTTTTTTGGAAGAAAAGAATTGATAGAGTCCTCCTTAATCTTTTGATAGAAAATATTCAAGATTTGTCAGAGGAACACGTCTCATCATTGGACAAACAAATATCCATTGCAAAGGAGGGTTTAAGAACCAATCATAAGCTTTGGGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTCGCAATACATTCTAGAGAAAATTTTAACCCTTGTATCCATGGAAGTGAGCTCTACATCAACTTAATCATCATATGTGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGAATATATCATAAGGAAGTTGATGATAGTATTCAGAGTGAACCAGCATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAACCATATTTCATCCCAAGCCAGACTCATATTTTCTAGAACATACTCTGCAGATCATTTCAGAAACTTAGTACATACGCTGGAATATACATCATCACTCGAAAGTTATGGATCCTTTGATAAGATCCAACTTATTATCAACTTGATTGGATTGATCTCTTTTTTAAGTTTACCACACCATCATACACTTGAAAGCAAATGTATAAAGACAGTTGCTTTTATAGCAAAACGATGCTTAGGCAACGATGTTGATATCTCAAGGCTCAGCTTAGCTTCTCATTTGCATACTACCTTATACGAAAATTCCTGTTGTTGGATGGATGCAGAAGATTGGGAAGGTTCTAATATTCTTTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTTTATCAATATGCTTCTTTACAAAATAGTTCCCACAAATCTATTGTTATAGAATATTTTGAAGTTCAATTAGTTAGCAAACTCATTGAGATTTGCAGTAATGCCTCTCTTAGTCATGGTTTAAGATGGTACGCAGCTTATATTCTTAGTCATTTTGGATTTTATGGCTTTCCAAATGAACTAGCCAAAAGGGTTGGGACATGTCTGAATGAGAAAGAATACGTGGATATTCAACTCTTTCTGCCCAATGGTAATACTTTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCATTGCTCCCTCCTGATCTCTTACTTGTTAAAGAAAAAAGAATCAATGAACAACAATGCATTAGGGAAGTTCGTTTATCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTTTACATGGGATACTTTCGTGCCAGTAAAGAAATTGTAAAGAAGGTGAAAACTCTTGCTAAGCGCTGCAATCTGCAACCTCTCTTACAAATGCTTCATAGACAAAGTCCAAAGTGGGGCACATCATTCCCCAGCTTTGATCTGACTTCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCCAAACTAGATAAACTTGAAAGATGGACATGCCATATATGCTCTCATTCAGTTCCACATTTGCATGTTCATAAAGTTATATTGCAGTCTGGCTGTGATTATTTGCAAGGTTTGTTTCGTTCTGGAATGAAAGAAAGTCATTCACAAATCATAAAGGTTCCGATTGGTTGGGAAGCAACAAGAAAGCTTGTGCACTGGTTCTATTCCAATGAGCTACCAAAGCCTCCATGTGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTGTTGAGTTTAGAATCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAATGTGATTGTATCTTGTCTTGATAATGCAAAGCAGTTGGCCATTAAAATACTTAAAATGGCTGGCGACTTCTCTTTGTGGAAATTAGCTGATGTTGCAGCAACTCACTTGGCTCCTTCTTATAGTCAGTTAAGAGATTCTTGTAAACTTGATGATTTGGATGATGCTCTTGTTCACTTAATTTGTTCTGCTTCTATTCAACTTAGTCAAAATGGATGA 3012 0.3728 MRSSGDKDKTRGVSLQLNNLHQRLLHALSLGTRYFDEKTNQWKWQSANIEVQKQVIRSIDVFLDFVSGDARVAHHTVVKDSVADILGALLWILQCKSRPLLCMAANVAVKLVCVLPNSILESYILDLVYALSSLLSSPFVEVAIPCSTSLNLVISNLNASSAKAVWEVLKQTECVIHIVGNIHKFVGGEIPMKIEYFEQMCSLLGSILSWWSPTRFPVWNDVKLIDTLSDMNARTDFSTKLVILKLYTSLALCGSVAKKLIENGENFLQMVVQSMGKSYPDTVRIEGFRLAQCLLRSQENCLKVMDTCGEALVDAIIFGMEEIEMHSRKFVNKNSSTLVEACRLALVTRWAGDHHIFFWKKRIDRVLLNLLIENIQDLSEEHVSSLDKQISIAKEGLRTNHKLWVRGYVWDILGWLAIHSRENFNPCIHGSELYINLIIICACLTFEDVIKKWCRIYHKEVDDSIQSEPASRAVLMMIYSPCNHISSQARLIFSRTYSADHFRNLVHTLEYTSSLESYGSFDKIQLIINLIGLISFLSLPHHHTLESKCIKTVAFIAKRCLGNDVDISRLSLASHLHTTLYENSCCWMDAEDWEGSNILLFYGLWGLAEMVYQYASLQNSSHKSIVIEYFEVQLVSKLIEICSNASLSHGLRWYAAYILSHFGFYGFPNELAKRVGTCLNEKEYVDIQLFLPNGNTLSVHGVILAVRCPSLLPPDLLLVKEKRINEQQCIREVRLSSHVDYEALVKLLEYVYMGYFRASKEIVKKVKTLAKRCNLQPLLQMLHRQSPKWGTSFPSFDLTSSLVSAGSCFWDVILESKLDKLERWTCHICSHSVPHLHVHKVILQSGCDYLQGLFRSGMKESHSQIIKVPIGWEATRKLVHWFYSNELPKPPCGCLWDNMDDEQKLLSLESYVELYWLSEFWILEDVQEACWNVIVSCLDNAKQLAIKILKMAGDFSLWKLADVAATHLAPSYSQLRDSCKLDDLDDALVHLICSASIQLSQNG 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3085 1003 SMART BTB_4 822 938 IPR000210 GO:0005515
Acco01g3085 1003 SMART BTB_4 685 790 IPR000210 GO:0005515
Acco01g3085 1003 SUPERFAMILY ARM repeat 45 478 IPR016024 -
Acco01g3085 1003 SUPERFAMILY POZ domain 835 935 IPR011333 -
Acco01g3085 1003 ProSiteProfiles BTB domain profile. 810 891 IPR000210 GO:0005515
Acco01g3085 1003 ProSiteProfiles BTB domain profile. 685 760 IPR000210 GO:0005515
Acco01g3085 1003 SUPERFAMILY POZ domain 664 782 IPR011333 -
Acco01g3085 1003 PANTHER OS06G0674800 PROTEIN 6 1002 IPR044953 -
Acco01g3085 1003 Pfam BTB/POZ domain 835 901 IPR000210 GO:0005515
Acco01g3085 1003 Pfam BTB/POZ domain 679 782 IPR000210 GO:0005515
Acco01g3085 1003 Gene3D Potassium Channel Kv1.1; Chain A 801 994 IPR011333 -
Acco01g3085 1003 Gene3D Potassium Channel Kv1.1; Chain A 667 785 IPR011333 -
Acco01g3085 1003 CDD BTB_POZ_ZBTB_KLHL-like 835 887 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco01g3085 BTB 1.8e-05 CL0033