Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3067 ATGGTTTTTACCCCTAATGGGGTCTTTTTATTCCCAAAATGCTTGTATTTCTACATTATGCCAGTTTTGAAAAGTAACATACACCAAGTCTACAGTACGCGAAGAGGAACCTTGAAGCTTAGCAACTCAAACATAGAAAACCCTTCAAGAATGGCGAAGCAGTACTTAGTGTTATGCGTAGTGATTTTGAAGCTTGCTTCTTCATCAGCACTTGCAGGCTCCTCCAAGCAAGGCTATGGTGATAAGAAATGTCCAATATTAGGCAATGATATATACAAACATACTTGCCCAGAAGCAGAGTCCATTGTCTTCTCTTGGGTGGAGAAAGCTGTGTCTCAGGAACCTAGAATGGCAGCCTCACTTCTTCGTCTTCACTTCCATGATTGCTTTGGATGTGATGCTTCGGTGCTGCTGGATGATAAAGAGGGCTTCGTTGGTGAGAAAACTGCAGCACCAAACTTGAATTCACTGAGAGGCTTTGAAGTGATTGATGCAATAAAATCTGAAGTTGAGCTGGTCTGCCCACAAACCGTATCCTGCGCTGACATTCTTGCAATTGCAGCTCGAGATTCTGTTGTTCTGTCAGGAGGTCCAAGCTGGGAAGTCCAAGTGGGAAGGAAAGACAGCTTCAGTGCTAACAAGCAGGCAGCAAACACCAACATTCCTGCTCCTAACTCCACTGTTGAAGTCCTCATCTCTAACTTCCAGAAAGTTGGTCTTTCACTCCGTGACATGGTGGCCCTTTCTGGAGGGCACACAATAGGAAAAGCTCGGTGCAGAACATTTAGTTCTCGTCTACAAGGCAGTGGTAGCAAAAGTGCACATGTGAATCTGGACTTCATTTCCTCACTCCAACAGTTATGTTCATCTGGAGGAGGAACAAACACCAACAATGGCAACACAGTAGCACATCTAGACTTTGTTACACCAGGTACATTTGACAACCAGTACTACGTTAATCTGCTCTCCGGGGAAGGCCTGCTTCCTTCAGACCAGGTTCTTATGAGTGGCAACAATGACCTGACCCAAGAACTTGTGCAAACCTACGCTGAAGACCCCTATACTTTCTTCCAGGACTTCAAGAATTCAATGATCAGAATGGGAAGCATCCCAGGGTCTTTCCATGGCAACATTCGTCGCAACTTAATCTCAAGCAAGAGCAGCAAAAATCAACAATGCGAAAGAGAACAGGGCCAATTAAAAGCAGAACTAAAACCTAAGCTTGGAAAAGAACCACCTGTTCTTGCCAGTCTTGAACCTCTCCTTGAACCTCTTTTTGATCTCCTTGGCCGCCGTGACCTTCTTGTCGCGAGATTGAAGAACGTCGAGAGTGTAACGAGTGGGCATGAGGTGGCTGCAGTTAACGACCTTGATGAAGGCCTTGACACGGGACTTGTTGGCGGTTTTTTTGGGGGAGTCCTTGCGGATGACTTTCTGTGGGTACTTGGAGATACCGGCGACGAGGCAGTGGCCGTAAGGGCGGTCCCGGGTTCCATCGTCGAAGTTGCGGACGATGACAACTTTCCGGCCGGTGAAGCGGCCCTGAAGAACGATCACCGCTTTGCTTGGTCGTACGAACTTCACCATCCCTTCCGCCTTGCTCCTTCCTTTGACTTCACTTTTCCCGCTGCTTCAGAGCTCACAGGATCTTTTATGAGAAAAAACACTCAAAAAGTTTGCATTCGTTATCCTCTTTTCTCATCTTTTTTATTTCATAAAATATCTCTTGCCTCTTCACTCTTACTGGCGGTAAACATGATAGCATCAACTCTGCTATCAGTGGCCAGTGCCGATGCCGGCGTTGCGGCAAGGTTGTCATGCGAAATCCGGCAACTGGGTCATCCTGAAGCCACGTCTTGTCCAAAATCCAGGAAGCTTTTCGGCTGCTATGATGGAAAGGGGTATCACTCGCAGCTGCTCAAGTGTTTCTGGAGAATTCCCAGCAATAGTAGTCCAAGTTTGACGAAGAGAAACTCGCAGTTGACATATGCTTACGGCAAAGAAGCTGAGGATAGCTTTTTATCGGATGTGAGGGAAGATACTGATGAGATGTACGATGAATTATTTAATAAGCATGGGAAAGTAGTATTTAGCAGTAAAGACAAGAAACCTGCTACGGCAGAGGTTGATGATGATGCTGAAAGCCTTTCATTTGCTGTGGAAGTGGCAAGGGTTGCAAGTGAGGTTAAGGCAGCAGATATAAAGGTCCTGTTTGTGAAGCCACTAGTATATTGGACTCGATTTTTTATCATAGCTACAGCATTTTCTCGTCCTCAAATTGATGCTATAGGGTCCAAAATTAGAGATATGGCGGAGAAGAAATATGGGAAAATTCCATCTGGAGACTTGAAACCCAATTCATGGACCCTGCTGGACTTTGGTGACATTGTTGTCCACATATTTCTTCCCCCACAAAGAGCTTTTTACAATTTGGAGGAGTTCTATGGCAATGCAACACCAATTGAACTACCTTTTGAAAATCAACCCCCATTTCGTGGTTGA 2502 0.4552 MVFTPNGVFLFPKCLYFYIMPVLKSNIHQVYSTRRGTLKLSNSNIENPSRMAKQYLVLCVVILKLASSSALAGSSKQGYGDKKCPILGNDIYKHTCPEAESIVFSWVEKAVSQEPRMAASLLRLHFHDCFGCDASVLLDDKEGFVGEKTAAPNLNSLRGFEVIDAIKSEVELVCPQTVSCADILAIAARDSVVLSGGPSWEVQVGRKDSFSANKQAANTNIPAPNSTVEVLISNFQKVGLSLRDMVALSGGHTIGKARCRTFSSRLQGSGSKSAHVNLDFISSLQQLCSSGGGTNTNNGNTVAHLDFVTPGTFDNQYYVNLLSGEGLLPSDQVLMSGNNDLTQELVQTYAEDPYTFFQDFKNSMIRMGSIPGSFHGNIRRNLISSKSSKNQQCEREQGQLKAELKPKLGKEPPVLASLEPLLEPLFDLLGRRDLLVARLKNVESVTSGHEVAAVNDLDEGLDTGLVGGFFGGVLADDFLWVLGDTGDEAVAVRAVPGSIVEVADDDNFPAGEAALKNDHRFAWSYELHHPFRLAPSFDFTFPAASELTGSFMRKNTQKVCIRYPLFSSFLFHKISLASSLLLAVNMIASTLLSVASADAGVAARLSCEIRQLGHPEATSCPKSRKLFGCYDGKGYHSQLLKCFWRIPSNSSPSLTKRNSQLTYAYGKEAEDSFLSDVREDTDEMYDELFNKHGKVVFSSKDKKPATAEVDDDAESLSFAVEVARVASEVKAADIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSKIRDMAEKKYGKIPSGDLKPNSWTLLDFGDIVVHIFLPPQRAFYNLEEFYGNATPIELPFENQPPFRG 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3067 833 ProSitePatterns Peroxidases proximal heme-ligand signature. 244 254 IPR019793 -
Acco01g3067 833 Pfam Peroxidase 106 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 CDD secretory_peroxidase 87 381 IPR033905 GO:0004601|GO:0042744
Acco01g3067 833 FunFam Peroxidase 90 232 - -
Acco01g3067 833 NCBIfam ribosome silencing factor 721 815 IPR004394 -
Acco01g3067 833 SUPERFAMILY Heme-dependent peroxidases 88 379 IPR010255 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 ProSiteProfiles Plant heme peroxidase family profile. 86 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 Pfam Ribosomal silencing factor during starvation 721 815 - -
Acco01g3067 833 PANTHER PEROXIDASE 72-RELATED 87 381 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 Gene3D Peroxidase, domain 2 222 367 - -
Acco01g3067 833 Gene3D Beta Polymerase, domain 2 714 823 IPR043519 -
Acco01g3067 833 Gene3D - 92 381 - -
Acco01g3067 833 Hamap Ribosomal silencing factor RsfS [rsfS]. 713 816 IPR004394 -
Acco01g3067 833 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Haem peroxidase superfamily signature 306 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Haem peroxidase superfamily signature 118 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 ProSitePatterns Peroxidases active site signature. 118 129 IPR019794 GO:0004601
Acco01g3067 833 FunFam Protein Iojap, chloroplastic 714 819 - -
Acco01g3067 833 SUPERFAMILY Nucleotidyltransferase 715 825 IPR043519 -
Acco01g3067 833 PRINTS Plant peroxidase signature 304 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 362 375 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 96 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 120 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 243 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 320 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco01g3067 833 FunFam Peroxidase 222 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3067 Acco-ChrAcco01 48227500 48235162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3067 86 381 Peroxidase AT4G16270 65.449 3.23e-132 396