Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3063 ATGGCGAAACCTGGGCGAGGCCGTCGCTCACCGCCGTCAGGTTCCATTTCGGGCTCCTCATCGCGCTCGAAGTCCTCCTCTCCCTCCGATTCCCGCTCCAGCTCCCGCTCCCACTCACTTTCTCGCTCTCCTTCTCGCTCCAGATCCTCTTCCTCGTCCTCTTCTCCATCCCGCAGCGTCAGTTCCGGGAGCCGAGGCCCCCCTCCTCCAAGGAGGAAAAGTCCTGCTGAAGCAGCCAGGAGAGGTAGATCTCCTCCTCCCCAATCTAAAAGAATATCTCCACCCCCCAGGAAACCTTCTCCTGTTCGTGAATCACTCGTTCTTCACATAGACAAACTCAGCAGGAATGTTCATGAAGGCCATTTGAAAGAAATATTCAGTAACTTTGGGGAGGTTGTAAATGTGGAGTTGGCCATGGATCGAACTGTTAACCTTCCTAAAGGATATGGATATGTGGAATTCAAGACAAGAGGGGATGCTGAAAAAGCCTTACTATTCATGGATGGTGCCCAAATAGATGGTAATATTGTTAAGGCCAGGTTTACCTTGCCACCAAGGCAGAAGGTTTCACTACCCTCAAAGGCTCCTGCTGTTGCTCCTAAGAGAGATGCTCCCAGAGCTGATAATGCTAGTGCAGATGCTGAAAAAGATGGGCCTAAGCGGCCAAGAGAACCTTCTCCTAGGAGACGACCTCCTTCACCACGAAGGAGATCTCCTGTACCTCGAAGAGTTGGATCACCAAGACGACCAGATTCTCCTGTTCGTCGCCGAATGGACTCACCCTATCGTCGTGGAGACACTCCTCCTAGGAGAAGGCCTGTCTCCCCTGCTAGAGGCAGATCTCCAACTCCTCCTAGGCGCCTTAGGTCCCCTGCAAGGGTCTCACCCAGAAGGATGCGTGGAAGTCCAATTCGCAGGCGTTCTCCTCCTCCTTTGAGGCGCCGTTCACCGCCGAGACGAGCTCGTAGTCCTAGAAGGTCTCCAATCAGTCGCAGACGTAGTCGCTCGCCGCCACGAAGGTCTGCACGCTCCCGATCAAGATCATTCTCACCACCACCACGAAGAGGTCGGCCACCTGTGAGACGTGGAAGGTCATCATCATCCTACTCTGATTCTCCAAGTCCTCGCAAGGTAACCCGGAGATCAAGGAGTCGCAGTCCAAGAAGGCCTTTGAGAGGAAGAGGTAGTAGCAACAGCAGCAGCAGCAGCTCACCACCCCCAGCTCGCAGACCATAG 1236 0.5421 MAKPGRGRRSPPSGSISGSSSRSKSSSPSDSRSSSRSHSLSRSPSRSRSSSSSSSPSRSVSSGSRGPPPPRRKSPAEAARRGRSPPPQSKRISPPPRKPSPVRESLVLHIDKLSRNVHEGHLKEIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRGDAEKALLFMDGAQIDGNIVKARFTLPPRQKVSLPSKAPAVAPKRDAPRADNASADAEKDGPKRPREPSPRRRPPSPRRRSPVPRRVGSPRRPDSPVRRRMDSPYRRGDTPPRRRPVSPARGRSPTPPRRLRSPARVSPRRMRGSPIRRRSPPPLRRRSPPRRARSPRRSPISRRRSRSPPRRSARSRSRSFSPPPRRGRPPVRRGRSSSSYSDSPSPRKVTRRSRSRSPRRPLRGRGSSNSSSSSSPPPARRP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3063 411 Gene3D - 14 190 IPR012677 -
Acco01g3063 411 MobiDBLite consensus disorder prediction 248 273 - -
Acco01g3063 411 MobiDBLite consensus disorder prediction 12 64 - -
Acco01g3063 411 SUPERFAMILY RNA-binding domain, RBD 93 189 IPR035979 GO:0003676
Acco01g3063 411 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 184 IPR000504 GO:0003723
Acco01g3063 411 MobiDBLite consensus disorder prediction 1 103 - -
Acco01g3063 411 FunFam Serine/arginine-rich splicing factor SR45 3 191 - -
Acco01g3063 411 SMART rrm1_1 107 180 IPR000504 GO:0003723
Acco01g3063 411 MobiDBLite consensus disorder prediction 187 411 - -
Acco01g3063 411 CDD RRM_RNPS1 108 180 IPR034201 -
Acco01g3063 411 MobiDBLite consensus disorder prediction 206 231 - -
Acco01g3063 411 MobiDBLite consensus disorder prediction 391 411 - -
Acco01g3063 411 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 176 IPR000504 GO:0003723
Acco01g3063 411 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 255 381 - -
Acco01g3063 411 MobiDBLite consensus disorder prediction 291 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3063 Acco-ChrAcco01 48211028 48215627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3063 108 181 Eukaryotic Initiation Factors Gene Family AT2G23350 29.730 3.43e-07 50.4