Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3053 ATGGACTTTAAGTATAACATTCGTAATATGTCTGTTATTGCTCATGTTGATCACGGAAAATCCACTCTCACCGATTCCCTAGTGGCTGCTGCCGGTATTATTGCCCAAGAAGTGGCAGGTGATGTCAGGATGACTGATACCCGTGCAGACGAAGCTGAGCGTGGTATCACCATTAAGTCTACTGGTATCTCCCTCTACTACGAGATGAGTGATGACTCCCTCAAGGCCTACAAGGGAGAGAGGAATGGGAATGAGTACCTGATCAATCTGATTGACTCTCCCGGGCACGTGGATTTCTCATCTGAGGTCACAGCTGCTCTCCGTATCACTGATGGAGCGCTCGTGGTGGTGGACTGCATTGAGGGTGTATGTGTGCAGACTGAAACCGTGCTTCGACAGGCTTTGGGAGAAAGAATTAGACCTGTCCTGACCGTCAATAAGATGGATAGGTGTTTCCTTGAGCTCCAGGTGGATGGTGAGGAGGCTTACCAGACCTTCCAGAGAGTCATTGAGAATGCTAATGTGATCATGGCCACATATGAAGATCCTCTCCTCGGTGACTGCCAAGTATACCCAGAGAAAGGGACGGTTGCTTTCTCCGCCGGTCTGCATGGTTGGGCTTTCACTCTAACCAACTTTGCTAAGATGTATGCTTCAAAATTCGGAGTTGACGAGTCAAAGATGATGGAAAGGCTGTGGGGTGAGAACTTCTTTGATCCAGCCACCAAGAAGTGGACTACCAAGAACACGGGCTCTCCTACTTGCAAGCGTGGGTTCGTTCAGTTCTGTTATGAGCCCATCAAGCAGATAATCAACACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCCATGCTGCAAAAACTCGGTGTGACCATGAAATCTGACGAGAAGGATCTGATGGGCAAGCCTTTGATGAAACGTGTGATGCAAACCTGGCTGCCAGCAAGCAGCGCACTATTGGAAATGATGATATTCCATCTTCCCTCACCTGCGAAAGCTCAAAAGTATCGTGTGGAGAACTTGTACGAGGGTCCTCTTGATGATGCTTACGCCGCTGCAATCAGGAACTGTGATCCTGAGGGACCTCTCATGCTCTATGTCTCTAAGATGATTCCTGCATCTGATAAGGGAAGGTTTTATGCCTTTGGCCGTGTCTTTTCCGGTAAGGTATCCACTGGTATGAAGGTTAGAATTATGGGACCCAATTATGTGCCGGGAGAGAAGAAAGATCTGTATGTGAAGAGCGTGCAAAGAACTGTTATCTGGATGGGTAAGAGGCAGGAAACCGTTGAGGATGTGCCTTGTGGCAACACTGTGGCCATGGTTGGTTTGGACCAATTTATCACCAAGAATGCCACTCTAACAAACGAGAAGGAAGTGGATGCTCACCCAATCAGAGCTATGAAGTTCTCTGTCTCACCTGTGGTGCGTGTTGCTGTCCAGTGCAAGGTTGCATCAGATCTTCCCAAGCTTGTTGAAGGTCTGAAGCGGCTGGCTAAGTCAGACCCTATGGTTGTTTGTACTATTGAGGAGTCTGGGGAGCACATTGTAGCTGGTGCAGGAGAACTTCACCTTGAGATCTGTTTGAAGGACTTGCAGGAAGATTTCATGGGTGGGGCTGAGATTATTAAGTCTGACCCTGTTGTGTCCTTCCGTGAGACTGTGTTGGAGAGATCCTGCCGAACCGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTTTATATGGAAGCAAGACCCATGGAGGAAGGGCTTGCCGAGGCGATTGATGAAGGCAAGATCGGTCCAAGGGATGACCCCAAAGTGCGCTCTAGAATCTTGGCAGAAGAGTTTGGTTGGGACAAGGATCTTGCAAAGAAAATCTGGTGTTTTGGGCCCGAGACGCTTGGACCAAACATGGTGGTGGATATGTGCAAGGGAGTGCAGTATCTGAATGAAATCAAGGATTCAGTCGTTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAGGGGCATCTGCTTTGAAGTGTGTGATGTTGTTCTTCATTCTGACGCCATCCACAGAGGTGGTGGTCAGATTATTCCCACGGCAAGGAGAGTCTTCTATGCATCCCAGTTGACTGCTAAGCCAAGACTTCTTGAGCCAGTGTACCTTGTGGAAATCCAGGCTCCTGAGCAGGCTCTTGGTGGCATCTACAGTGTTCTGAATCAGAAGCGTGGACATGTGTTTGAGGAGATGCAGAGGCCTGGTACCCCCCTATACAACATCAAGGCATACCTCCCTGTCGTTGAGTCCTTTGGGTTCTCAAGCACTTTGAGGGCAGCTACATCAGGCCAGGCTTTCCCTCAGTGTGTGTTTGATCACTGGGACACGATGTCCTCAGATCCGTTGGAATCTGGATCCCAAGCTGCACAGCTTGTTGCTGACATTCGCAAGAGGAAGGGTTTGAAGGAACAGATGACCCCTCTTTCAGAATATGAAGACAAACTTTAA 2496 0.488 MDFKYNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDDSLKAYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKDLMGKPLMKRVMQTWLPASSALLEMMIFHLPSPAKAQKYRVENLYEGPLDDAYAAAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGKVSTGMKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGKIGPRDDPKVRSRILAEEFGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHSDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEYEDKL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3053 831 Gene3D - 558 710 IPR014721 -
Acco01g3053 831 SUPERFAMILY Translation proteins 330 464 IPR009000 -
Acco01g3053 831 FunFam Translation elongation factor 2 1 225 - -
Acco01g3053 831 SUPERFAMILY Ribosomal protein S5 domain 2-like 550 714 IPR020568 -
Acco01g3053 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 329 IPR027417 -
Acco01g3053 831 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 IPR031157 -
Acco01g3053 831 Gene3D Elongation Factor G (Translational Gtpase), domain 3 474 551 - -
Acco01g3053 831 CDD eEF2_snRNP_like_C 715 793 - -
Acco01g3053 831 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 332 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 CDD aeEF2_snRNP_like_IV 547 719 - -
Acco01g3053 831 CDD EF2 8 218 - -
Acco01g3053 831 FunFam Translation elongation factor 2 557 710 - -
Acco01g3053 831 PRINTS GTP-binding elongation factor signature 141 150 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 PRINTS GTP-binding elongation factor signature 89 99 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 PRINTS GTP-binding elongation factor signature 105 116 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 CDD EF2_snRNP_III 475 547 - -
Acco01g3053 831 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 830 - -
Acco01g3053 831 Pfam Elongation factor Tu domain 2 381 455 IPR004161 GO:0005525
Acco01g3053 831 SUPERFAMILY EF-G C-terminal domain-like 715 826 IPR035647 -
Acco01g3053 831 Pfam Elongation factor Tu GTP binding domain 6 330 IPR000795 GO:0003924|GO:0005525
Acco01g3053 831 Pfam Elongation Factor G, domain III 475 537 IPR041095 -
Acco01g3053 831 FunFam Translation elongation factor 2 474 551 - -
Acco01g3053 831 FunFam Elongation factor 2 210 314 - -
Acco01g3053 831 SMART EFG_IV_2 593 710 IPR005517 GO:0005525
Acco01g3053 831 FunFam Translation elongation factor 2 711 831 - -
Acco01g3053 831 SMART EFG_C_a 712 801 IPR000640 -
Acco01g3053 831 Pfam Elongation factor G C-terminus 712 799 IPR000640 -
Acco01g3053 831 Gene3D Yeast translation eEF2 (G' domain) 210 314 - -
Acco01g3053 831 Gene3D - 711 831 - -
Acco01g3053 831 SUPERFAMILY EF-G C-terminal domain-like 472 548 IPR035647 -
Acco01g3053 831 CDD EF2_II 363 458 - -
Acco01g3053 831 FunFam Translation elongation factor 2 331 472 - -
Acco01g3053 831 NCBIfam small GTP-binding protein domain 8 164 IPR005225 GO:0005525
Acco01g3053 831 Gene3D Translation factors 331 472 - -
Acco01g3053 831 Gene3D - 4 194 IPR027417 -
Acco01g3053 831 Pfam Elongation factor G, domain IV 598 710 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3053 Acco-ChrAcco01 48043783 48047015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3053 1 831 Eukaryotic Initiation Factors Gene Family AT1G56070 93.141 0.0 1631