Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3044 ATGGCTTCCATACCTCAGTTCTATTCAAACCAGAGTGATTTCACTGACTTGATCACCACTAGCAATCAAGTAAATGAAATGATGAGTTCCTCAGTTATGGAAGATAATACAATGTGGGGCGATCAACACCGATATGGCTTTGTTCCATTGCTTGATAACAGTTTTGGTACTGTTCTTGATCATCATCATGATCATACTGTGTCCTCATCAACGTCCATGAATTATTATTCTGATTCATGGTCGCAGGCTTTTCCTTTGGAGCACCGAGCCAGCCAGCCGGAAGTTTCAGACCTCCGAACCCCCCACCACCATAGCTTCTATGGCATTAACAATAATGATGGGTTTCAGAGCTTGTTGAGCGGTGAATTATTATCATACCAACAACCATATAACATTGGTGACTTTGCAGATGAATGTTGTGGCTTTGTGGAAGACATAAAGCCTCTTGTTTGTCCTAATAAAGCTTCAAGAGACAACTGGGGAAATCAAGGGAATCAAGTGGTAGCAGTTGAACAAGAGAACATTAAGGTGGGAAGATATTCGGAAGAAGAAAGGAAGGAAAGAATTCTGCGATATTTGAAGAAAAGAAACCAAAGGAACTTCAACAAAACCATCAAGTACGCTTGTCGGAAAACCCTAGCAGATCGGAGAGTGAGAGTGAGAGGAAGATTTGCCAGAAACAACGAGCTGTGTGAGGATGAAATGGCAATGAAAAAGAATATTGAGAACCTTCAACAATACGACTTGTATGGTGCCGATGATTCTATTCAGTTCCAGTTAAGAAATGAGGAGGAGGATTGGCTGCAAGAAGCGATGGAAAGTCTGGCGTTTCTATCTCATTCTTCCCCAGAAGATATATAA 861 0.4135 MASIPQFYSNQSDFTDLITTSNQVNEMMSSSVMEDNTMWGDQHRYGFVPLLDNSFGTVLDHHHDHTVSSSTSMNYYSDSWSQAFPLEHRASQPEVSDLRTPHHHSFYGINNNDGFQSLLSGELLSYQQPYNIGDFADECCGFVEDIKPLVCPNKASRDNWGNQGNQVVAVEQENIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDEMAMKKNIENLQQYDLYGADDSIQFQLRNEEEDWLQEAMESLAFLSHSSPEDI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3044 286 Pfam CCT motif 185 227 IPR010402 GO:0005515
Acco01g3044 286 ProSiteProfiles CCT domain profile. 185 227 IPR010402 GO:0005515
Acco01g3044 286 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 65 240 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3044 Acco-ChrAcco01 47958055 47959568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3044 181 235 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 4.71e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco01g3044 CCT 9e-17 CL0281