Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3040 ATGGTGCCAATGGCGGCCGTGGGTCTAAACCAGAGGCCTTTCGGTCAGCAAGTAGGAAGCCCCTCTTTTGCCGCCATAGCTCCCAACTTGCTTATTCCAAACTCCTCCATTATTTTCCCATGTGATAATAATCGAACAGCAGCAGCAACGGCGGCGGCAGGTGGCTCAGCTGCAAAAATCATGCTAGCAAAAGAGAAGAAAGAGGAGATACAGCAACAGAAGAGAGACGAAGAAGGCTTACACCTCCTAACTTTGCTGCTTCAGTGTGCCGAGGCTGTGGCGGCTGATAACTTCGATGAAGCCAATAAGATGTTGCTGGAGATTTCACAACTCTCCACACTGTTCAGCACGTCGGCGCAGCGGGTGGCGGCGTATTTCTTGGAAGAGAAGAGGACTGTCCAAGCTCCGGCTACATTAGAGAACAGATGA 429 0.5105 MVPMAAVGLNQRPFGQQVGSPSFAAIAPNLLIPNSSIIFPCDNNRTAAATAAAGGSAAKIMLAKEKKEEIQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTLFSTSAQRVAAYFLEEKRTVQAPATLENR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3040 142 Pfam GRAS domain family 83 128 IPR005202 -
Acco01g3040 142 ProSiteProfiles GRAS family profile. 73 142 IPR005202 -
Acco01g3040 142 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3040 Acco-ChrAcco01 47932823 47933251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3040 34 128 GRAS Transcription Factor Family AT3G54220 62.105 6.61e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3040 GRAS 4e-09 CL0063