Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3027 ATGCCATACAACAAGCACACTCCTCCCATGGCCTCCTCCACTGTCTTGTCTTCTAACCCTAGGGTTTTCTCTTCCACCGTCTCCGATCATCATCCTCATCATCATTGCCGTCCTCTCCCTCAATCTCCCACCTTCCCCAAATCCTTCTGTGGCCTCTGCAAACCTTTCCATTCTCGGGTTCCCACTTCGTTTCGCCGTCGAGGCTTCCTCGTCAAAGCTTCGGTTATAAAGTGGCGATGTCCAAAGCAAGTTCTCCCTTCCAACTGTGACACTGATTTCCAGAAAAAAGTTCTGTATCTAGAGTCTATTGGTATTGACTCTTCCTCACTTATTGAAAATCATCCAACTGTCATCTCTGCCTCCTCTCTTCCTAATATAAAATCCACTGTGGAATTCTTAACATCCTTGGGTTTCTCTGCAATTGAGTTCCGGCGCATTGTTGGCATGTGCCCAGAGATTCTCACATCCAGAGTATCGGATATTTTACCTGTCATCACGTTCCTGATCCGCGAAGCTCGCGTGAATGGGTCAGATATTAAGTGTATCGTAAACCGTCGTCCCAGGTTGCTTGTTTGCAGCGTTACCGAGCAACTTCGTCCCACCCTGTACTTTCTCCAAAGCATTGGCATCGAAGAAGTAAACAGACACACATACTTGCTATCATGCAGTGTTGAAGATAAGCTTATTCCCAGGATTGATTACTTTGAGAATATTGGCTTTTCTCGCCGCGATGCGACTACCATGTTCCGAAGATTTCCTCCGCTTTTTAACTATAGTATAAAGAATAATTTGGAGCCTAAATACAAGTACTTTGTTGTGGAAATGGGGAGAGATCTGAAGGAGCTGAAAGAATTCCCCCAATATTTCTCATTTAGCTTAGAGAGTAGGATCAAACCTAGGCATAAACTGTGTGTAGAAATGGGGGTTTATTTTCCTCTCCCTGTATTATTAAAGACAAACGAATCGCAATTTCGCAATAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTTCAATATCTTCTGTAACTACTGTATCTGTAACAGCTGTGATCAAAGTTGGAATTGCAAAAACTGCTTCTTCATCGTCATTTTCCTTGAAGCTTCTTTGTGGGTTGCGTTGGGACGCCAATTCCAAGGACAAAGAAATGAGGAATCTTTATCCAGAAAGGATAGAAATCGAGGATCAACCAAAGTTGCTTTATATGTCAATGGTGATTGTTCTTCTTCTTCTTGGTCTTGTTGGTCTTGTTCTTGGCTAG 1284 0.4283 MPYNKHTPPMASSTVLSSNPRVFSSTVSDHHPHHHCRPLPQSPTFPKSFCGLCKPFHSRVPTSFRRRGFLVKASVIKWRCPKQVLPSNCDTDFQKKVLYLESIGIDSSSLIENHPTVISASSLPNIKSTVEFLTSLGFSAIEFRRIVGMCPEILTSRVSDILPVITFLIREARVNGSDIKCIVNRRPRLLVCSVTEQLRPTLYFLQSIGIEEVNRHTYLLSCSVEDKLIPRIDYFENIGFSRRDATTMFRRFPPLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLESRIKPRHKLCVEMGVYFPLPVLLKTNESQFRNRLDVCVNSSTPLKTSPLWCSISSVTTVSVTAVIKVGIAKTASSSSFSLKLLCGLRWDANSKDKEMRNLYPERIEIEDQPKLLYMSMVIVLLLLGLVGLVLG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3027 427 PANTHER CGI-12 PROTEIN-RELATED 98 329 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 Gene3D Transcription termination factor 3, mitochondrial 107 332 IPR038538 -
Acco01g3027 427 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 SMART mt_12 212 241 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 SMART mt_12 246 278 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 Pfam mTERF 178 324 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 Pfam mTERF 78 174 IPR003690 GO:0003690|GO:0006355
Acco01g3027 427 FunFam Transcription termination factor MTEF1, chloroplastic 168 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3027 Acco-ChrAcco01 47802013 47805866 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco01g3027 mTERF 4.1e-26 No_clan