Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3024 ATGTCTGTGATCAGTAAGCTTGGGACAATGTTGCTGCTTATTTTGGGAAACTCGGGGCTGTGGAGAACTACTTGTTATGTACAACCCATGAGTGACCATTTGAAGCCAGGTGATCGGCTAAATTACACAAACCCTAAAATATGCTCAGCGAGAGACTTTTATTGCTTGCAATTTATGAAAATAGACAGTCGCTCCCCCTTTAATTATCTAATAGTTTACAATGGATTTCTTGGATTGAGTGTCTGGGTTGCCAACCGGAACGATCGAATTCTCAATGTTTCTTTAGAAGCTTTAACTTTGGATCAGTCTGGTGTGCTGAAAATTACACACCAAGGACAAGGGCCAACCATACTCTACTCTCCTCCCAGAGATCAGCCCCAAGAACTCATAAACAACACCACTGCCACCTTGTTGGACACTGGCAACTTTGTACAGCAACAACACCACCCAAATGGATCAAACATTATCTTGTGGCAAAGTTTTGATTATCCCACTGACACTCTTCTCTCAGGAATGAGGTTAGGTGTTAATCATAAAACTGGAGAAAAAAGGTCACTAGTTTCATACTTTCTTGATATATCAGCTTCTCCGGGCCCCTTCACGCTGGAATGGGAACCAAGAACGAGTCAATTGCTCATTCTGCGAAGAGGACAGGTTTATTGGGCAAATGGGGCATTGAGAAATGGCAAGTTCGAAAACTTATCAGAGAAAGCCCAAAGCTTGTATAACTACACCATTGTCTCAAACAAAGATGAAGAGTACTTCACATTTTCACCTCAGAATGATGCAGCTGAGATTGATAAAGATTATGCAAGATGGTCAATCGATCCTACTGGGAGGCTATTAGAAAGATCCAACATGATTGCAAATACTGGTGAATGTTATGGTTATGCCAACAATGATGGATGCCAGTTACGGGATCAACCAGCTTGTAGGCACAAAGGGGAGTTCTTTGACAACATATATGTTAGTGCAAGAGATGAAGGCATCACCTACAGTGTAGATGACAATGCGAACTTGACCATAAGTGATTGCCAAGCCACATGCTGGAGCAAGTGCCAGTGTGTCGGATTCACTAGTTATAGTAATAATGCAACCGGATGTGTCTTCTATTTTGAGAATTCACAGATGAGCGCTCCTAAAGAAAATATCTTAAAACTCAATTTCCTTACGAATAGATCTGAGCCCATAAATAAAGGAGGCCCAGCACAGGCGCCAAGTCCAGGAGAAATGGACCAACATCAACACTCAAATGCAAGTGCAAAAAGAATCATATTGCTTGTTTCTGTCATCAGCACCACTCTGTTTATCATATGCGCAATTCTATGGATACTGTTGAGAAGAAGGAAAATCATGCTTGAAGGCAAGAAAAGAACAGATATTGAGGATGACAAGGGTGCAAAAGAAGCTTCGAACGAAGCTGCAAATTTGAAAGAATTCCAAAACTATAACAAGGATGGACCTGCTTTAAACTTCTTTAGCTATGCAACAATGATGGAAGCTACTGATAGCTTCTCATCAAATAACAAGTTAGGACAGGGAGGTTTTGGACATGTTTACAGGATTCATCATATCATCTCACTTCTCTCATTGCGTCTCTGGGAATTCAAGGGACAGAGAAGAGAAATGGGTGTTGTGATACAGATTTACCACGGGAACTATCCTTACGGGAGGCTCCAAGCTCATCTGAAGATCGATCTTTCACAGATTGCAGAAAGATTTGCTTCAATGGCCATCATGGCTGCCTTGTCTATTTTATCATGTTTATGCCTCTGGAGAACCAGTTGTATTGGTGCAGAAATACATAGTTTGAAGCCAGGCGACGTGGTTAATAAAAAAACCTGGCTAACTTCTGAAAACCAGAGGTTCTTTCTAAGCCTTGGACCACTTGAACTGAACTCTAACCTCGCCTATCTTTTTATAGGCCACAGAGACACTTCCACTGAAGCTGAACAAGACACCAACCAAGGTTATAGGAGTTGGATAGCAAACAGAAACGATCCTATTTCCGACCATTCTGATTCCAACTATCTTACTTTGGATCATTCTGGTGCTCTCACTATCAACCGTCAAAACGAGAAGCCAATAACTCTGTACTCTCCTGTCAAACCTCAAGTTACCAACAAGAATACCATTCTAACTCTTTCAGATTCAGGAAACTTGGTTCTGCTAGAGTTGCATCCCAATGGTTTTTCAAAGCAAGTGTTGTGGCAGAGTTTTGATCATCCTTCAGATATACTACTTCCTGGCATGAAGTTAGGAGTCAATCACCAAACTCACCAATCTTGGTCTGTCACAGCCTCTCTTTCTGATACATCCCCAGCTTCAGGTTCCTTCACACTTGAGTGGGAACCAAGAATAAAGCAATTAATCATTAAGAGACAAGGGCAGATATATTGGATGAGTGGGGTGTTGAAGAACAAGAGATTTGTGAACATACCAGAACAAGTTCAGAAGTTTTATGAATACAGCATTGTCTCAAACGAGGAGGAAGATTCTTTTAGTTTCAGAAGCAAATATGGTGATGAATCACAGTGGGTGCTGTTTCATAATGGTAGGTTATTGGAAACAAGAGGGGGTGATTTTATCATTGCTAGTGCTGATACTTGCTATGGCTATAATAGTGTAGGTGGGTGTCAAAAATGGGAATCACCCAAATGTAGAAAACCTGGTGAAAGATTCCAAATCCAGTTTCAATTTATGGTTGCTCCATCTGGGAATGATAGTTTTTCTGTGGTGGACAAAAACGTTAGTATTGGTGAAAGTGATTGCAAGGCTACTTGCTGGATCAACTGTACCTGCTTTGCCTTCAAAACGCTTTTCTCCAATGGAACTGGATGCATATATTACCATGGACATTGGAGAACAGAGAAGATTGACTCTAGGGATGAAAGCATTAACATCTTAGTACCATCAACAAGAGACTCAGATCATAAAGTACTCAAACAGAAACCTCGGTTGTTCATATTTAAGAAAACATCTTCTGTGAAACTTTTCATATGCTTTGCAACACTTGAAGATTGGCAATGCAATGCAGATTTGAAATGGAAAATAATTGGTCCTACAATGGCAGCAGCTCTGATCACGATCTGCCTTGGAATTTTCTACTTAAGTATGTGGAGAAAAGCAAGTGAAGTTCAAGACATTGAAGGAAGAAGCAGAGAGGAGAATGAACTTCTCAACTTAGTGTCCTTTGACAGACATACCACTGTTAATGAACTTAAAAATAATGTAAAAAAGGGGAATTTAAAAATTTTCAACTATGAATCAATCATGGAAGCAACAAACAGGTTCTCCCCAGAGAACATAGTGGGCAAAGGAGGCTTTGGACCTGTATATAAGGGATTATTGCCAATGGGAGAAGAAATAGCCATAAAAAGACTTTCAAGAGGTTCATCACAAGGAGCAATTGAGTTTAAAAATGAACTAATTCTGATAGCTGAACTCCAACATGTGAATCTTGTTCAGCTGTTAGGTTGCTGCATCCATGAAGAAGAGAGGATGTTAATCTATGAGTTCATGCCTAACAAAAGCTTGGACTTCTTTCTATTTGATTCTACTCATAGCAAGTCGCTAGGTTGGAAAAGGCGATTCAACATAATTGAGGGGATCATTCAAGGATTGCTCTATCTCCATAAATATTCAAGACTAAAAATAATTCATAGAGATTTGAAAGCTAGTAACATTCTTCTTGATGACAACATGAATCCTAAAATTTCAGATTTTGGTTTGGCCAAGATTTTTACACAAGAATCAAATATACAGACCAAACGGATTGTAGGGACATATGGATACATGTCACCTGAATATGCCATGGAAGGGATTTTCTCCACTAAATCAGACGTCTATAGTTTTGGAGTATTAACACTCGAAATCATAAGTGGTAGAAGAAATAACAGTTTCCACAATTCCCTAGGTCCACTAAATCTAGTAGGTCAGGTTTGGAAACTATGGAAAGAAGGTCAAGTTCTAGACATAGTTGATCCCACTTTGAGGGAACAATGTGAACCTGATCAAGTATCAAGATGTGTCCACATTGGACTTTTATGTGTAGAAGAAAATGCAGAAGATCGTCCAGCTATGTCAGATGTTATAGCCATGTTGGCAAGTGAAACTGCTTCACTTCCTTTCCCAGCAAGGCCTGCATTTTGTAGTGGAAGAAGAAAGCTCAAAAAGAAATATCATCCTGGGGATTTTGAAACTCATTCTGTGAATGGTTTGTCTATTTCAACCATAAAAGCAAGATAG 4248 0.3978 MSVISKLGTMLLLILGNSGLWRTTCYVQPMSDHLKPGDRLNYTNPKICSARDFYCLQFMKIDSRSPFNYLIVYNGFLGLSVWVANRNDRILNVSLEALTLDQSGVLKITHQGQGPTILYSPPRDQPQELINNTTATLLDTGNFVQQQHHPNGSNIILWQSFDYPTDTLLSGMRLGVNHKTGEKRSLVSYFLDISASPGPFTLEWEPRTSQLLILRRGQVYWANGALRNGKFENLSEKAQSLYNYTIVSNKDEEYFTFSPQNDAAEIDKDYARWSIDPTGRLLERSNMIANTGECYGYANNDGCQLRDQPACRHKGEFFDNIYVSARDEGITYSVDDNANLTISDCQATCWSKCQCVGFTSYSNNATGCVFYFENSQMSAPKENILKLNFLTNRSEPINKGGPAQAPSPGEMDQHQHSNASAKRIILLVSVISTTLFIICAILWILLRRRKIMLEGKKRTDIEDDKGAKEASNEAANLKEFQNYNKDGPALNFFSYATMMEATDSFSSNNKLGQGGFGHVYRIHHIISLLSLRLWEFKGQRREMGVVIQIYHGNYPYGRLQAHLKIDLSQIAERFASMAIMAALSILSCLCLWRTSCIGAEIHSLKPGDVVNKKTWLTSENQRFFLSLGPLELNSNLAYLFIGHRDTSTEAEQDTNQGYRSWIANRNDPISDHSDSNYLTLDHSGALTINRQNEKPITLYSPVKPQVTNKNTILTLSDSGNLVLLELHPNGFSKQVLWQSFDHPSDILLPGMKLGVNHQTHQSWSVTASLSDTSPASGSFTLEWEPRIKQLIIKRQGQIYWMSGVLKNKRFVNIPEQVQKFYEYSIVSNEEEDSFSFRSKYGDESQWVLFHNGRLLETRGGDFIIASADTCYGYNSVGGCQKWESPKCRKPGERFQIQFQFMVAPSGNDSFSVVDKNVSIGESDCKATCWINCTCFAFKTLFSNGTGCIYYHGHWRTEKIDSRDESINILVPSTRDSDHKVLKQKPRLFIFKKTSSVKLFICFATLEDWQCNADLKWKIIGPTMAAALITICLGIFYLSMWRKASEVQDIEGRSREENELLNLVSFDRHTTVNELKNNVKKGNLKIFNYESIMEATNRFSPENIVGKGGFGPVYKGLLPMGEEIAIKRLSRGSSQGAIEFKNELILIAELQHVNLVQLLGCCIHEEERMLIYEFMPNKSLDFFLFDSTHSKSLGWKRRFNIIEGIIQGLLYLHKYSRLKIIHRDLKASNILLDDNMNPKISDFGLAKIFTQESNIQTKRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVLTLEIISGRRNNSFHNSLGPLNLVGQVWKLWKEGQVLDIVDPTLREQCEPDQVSRCVHIGLLCVEENAEDRPAMSDVIAMLASETASLPFPARPAFCSGRRKLKKKYHPGDFETHSVNGLSISTIKAR 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3024 1415 ProSiteProfiles Protein kinase domain profile. 1098 1378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3024 1415 FunFam Uncharacterized protein 1073 1173 - -
Acco01g3024 1415 Pfam D-mannose binding lectin 81 188 IPR001480 -
Acco01g3024 1415 Pfam D-mannose binding lectin 661 767 IPR001480 -
Acco01g3024 1415 Pfam Domain of unknown function (DUF3403) 1370 1415 IPR021820 GO:0004674
Acco01g3024 1415 Gene3D Phosphorylase Kinase; domain 1 475 529 - -
Acco01g3024 1415 SMART blect_4 38 164 IPR001480 -
Acco01g3024 1415 SMART blect_4 607 743 IPR001480 -
Acco01g3024 1415 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 182 IPR036426 -
Acco01g3024 1415 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1174 1376 - -
Acco01g3024 1415 SMART serkin_6 1098 1370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3024 1415 Gene3D Transferase(Phosphotransferase) domain 1 1174 1375 - -
Acco01g3024 1415 Gene3D Phosphorylase Kinase; domain 1 1061 1173 - -
Acco01g3024 1415 Pfam Protein tyrosine and serine/threonine kinase 1102 1367 IPR001245 GO:0004672|GO:0006468
Acco01g3024 1415 SUPERFAMILY alpha-D-mannose-specific plant lectins 658 767 IPR036426 -
Acco01g3024 1415 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 144 524 - -
Acco01g3024 1415 MobiDBLite consensus disorder prediction 395 415 - -
Acco01g3024 1415 Gene3D - 597 740 IPR036426 -
Acco01g3024 1415 ProSiteProfiles Bulb-type lectin domain profile. 31 158 IPR001480 -
Acco01g3024 1415 SUPERFAMILY Protein kinase-like (PK-like) 1083 1388 IPR011009 -
Acco01g3024 1415 Pfam PAN-like domain 909 952 IPR003609 -
Acco01g3024 1415 ProSiteProfiles Bulb-type lectin domain profile. 601 736 IPR001480 -
Acco01g3024 1415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1219 1231 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3024 Acco-ChrAcco01 47771739 47780440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3024 1086 1392 Receptor kinase-like Gene Family AT4G11530 56.958 3.61e-115 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3024 PK_Tyr_Ser-Thr 1.8e-45 CL0016