Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3023 ATGTCTGTGATCAGTAAGCTTGGGACAGCTACTTGTTATGCACAAGACGTGAGTAACCATTTGAAGCCAGGTGATCGGCTAAATTACCCAAACCATAATATATGCTCAGAGAGAGGCGCTTATTGCTTGACATTTACGAAGATAACCGCTAACTCCCCCTTTTATTATCTAACGGTCTTCTCTGGATACCTTGAATTGAGTGTCTGGGTTGCCAACCGGAACGACCAAATTCTCGATGCTTCTTCGGAAGTTTTAACTTTGGATCATTCTGGTGTGTTGAAAATAACACACCATGGGCAAAAGCCAACCATACTCTACTCTCCTCCCAGAGATCAGCCTCAACATCTCATAAACAACACTACTGCCACCTTGTTGGACACTGGTAACTTTGTACTGCAACAACATCACCCAAACGGATCAAACATTGTCTTGTCCCTTCACACTGGAATGGGAACCAAGAACGAGGCAATTGCTCATTCTGCGAAGAGGAGAGGTGCTGGTGACTATTATCGCTATACCAGCAAGGGAGGATGCCGGTTACGGGATCAACCAACTTGTAGGCACGAAGGGGAGTTCTTTGACATCATGGATGTTAGTGTAAGAAATCACGGCAACACCTACAGCGTAGATGACAATGCGAACTTGACCATAAGTGATTGCCAAGCCACATGCTGGAGCAACTGCCGCTGTGTCGGATTCACTAGTTATAGTTATAATGAAACCGGATGTGTCTTCTATTTTGAGACTCCACAGGCGAGTGTTTCCGAAGACAATACCGTAGAACTTCACCTCCTTGCTAATAGTTCTGGGCCCATAGATAAAGGAGGCCGAGCACTGGCGCCAACTCCAGGAGAAACGGACCAACATCAACACTCAAATGCAAGTACAATAAGAATCATATTGCTTGTTTCTGTCACTAGCACCACTCTGTTTATCATATGCGCAATTCTATGGATGCAGTTGAGGAGAAGGAAAATCATGCTTGAAGGCAGGAAAAGAACAGATATTGAGGATGACAAGGGTGCAAAAGAAGCTTCGAACGAAGCTGCAAATTTGAAAGAATTCAGAAACTATAACACGGATGGACATGCTTTAAAATTCTTTAGCTATGCATCAATGATGGAAGCTACTGATAGCTTCTCATCAAATAACAAGTTAGGACAGGGAGGCTTTGGACATGTTTACAAGGTAAAGTCCTCTACGGTCATTGGTTACATGTCCCCTGAATACGCGATGGAGGGAATTTTCTCCATAAAGTCAGATGTCTACAGTTTTGGGATCCTTATGCTTGAGATTGTGAGTGGCAGAAGAAACAACAGTTTTTACAATGAGAATTCCTCACTTAAAGTAGTGGGACATGCCTGGGAGCTTTGGAAAGACGGCGCAGCCCTAGAACTGGTTGATCAAGGAATCAAAGATTCGGTAGTACAAGATGAAGCCTTGAGATGCATTCATGTCGCCCTACTATGTGTAGAAGAAAAGGCAGTTGATCGACCTACCATGGCAGACAGTTTATCAATGCTGACAAATCAAAGTTCAAAGCTTCCTTTGCTTAAGATACCTGCATTTTGTTCCGGAGGTCATTATAGTGCAGTTAATAAACCCATTGCTGATTCAGTAAATGGCTTGTCAACCTCCGATTTATTTGCAAGATAG 1656 0.4336 MSVISKLGTATCYAQDVSNHLKPGDRLNYPNHNICSERGAYCLTFTKITANSPFYYLTVFSGYLELSVWVANRNDQILDASSEVLTLDHSGVLKITHHGQKPTILYSPPRDQPQHLINNTTATLLDTGNFVLQQHHPNGSNIVLSLHTGMGTKNEAIAHSAKRRGAGDYYRYTSKGGCRLRDQPTCRHEGEFFDIMDVSVRNHGNTYSVDDNANLTISDCQATCWSNCRCVGFTSYSYNETGCVFYFETPQASVSEDNTVELHLLANSSGPIDKGGRALAPTPGETDQHQHSNASTIRIILLVSVTSTTLFIICAILWMQLRRRKIMLEGRKRTDIEDDKGAKEASNEAANLKEFRNYNTDGHALKFFSYASMMEATDSFSSNNKLGQGGFGHVYKVKSSTVIGYMSPEYAMEGIFSIKSDVYSFGILMLEIVSGRRNNSFYNENSSLKVVGHAWELWKDGAALELVDQGIKDSVVQDEALRCIHVALLCVEEKAVDRPTMADSLSMLTNQSSKLPLLKIPAFCSGGHYSAVNKPIADSVNGLSTSDLFAR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3023 551 ProSiteProfiles Bulb-type lectin domain profile. 18 145 IPR001480 -
Acco01g3023 551 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 395 513 - -
Acco01g3023 551 SUPERFAMILY Protein kinase-like (PK-like) 403 520 IPR011009 -
Acco01g3023 551 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 137 IPR036426 -
Acco01g3023 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 209 398 - -
Acco01g3023 551 Gene3D Phosphorylase Kinase; domain 1 338 402 - -
Acco01g3023 551 Pfam Protein tyrosine and serine/threonine kinase 399 504 IPR001245 GO:0004672|GO:0006468
Acco01g3023 551 Gene3D Transferase(Phosphotransferase) domain 1 403 518 - -
Acco01g3023 551 ProSiteProfiles PAN/Apple domain profile. 186 269 IPR003609 -
Acco01g3023 551 Pfam PAN-like domain 186 246 IPR003609 -
Acco01g3023 551 Gene3D - 11 148 IPR036426 -
Acco01g3023 551 Pfam D-mannose binding lectin 68 140 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3023 Acco-ChrAcco01 47763686 47767005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3023 383 551 Receptor kinase-like Gene Family AT4G11530 42.246 2.59e-41 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g3023 PK_Tyr_Ser-Thr 5.5e-09 CL0016