Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3019 ATGGCAATTCCTCTAAGCTCTTACTTCAACAGGGAAAACCTTTTCCAAACACTATTGAACGACCCAGAAATGATGAGCAGTTACTGTCCCTTCTTTCATGAAGAAACACCACAACCACGACCACCAGATTTTTTCGATTCTGAAAGTTTCTTGTTCCCTAATGATAATAATGCAAACAATTTTTTGTTTGATGATTATTATTCATCCCCTGCAAAACTAACCTACCCTTCTCCTCCTCTGCCTCAATGTCAAACACCATCACTACCACTCTCTCACCATAGTAACAACATTAACATCTTCCCCGTCAGTGATGATGATCAGACCTTTCAATGTCTTTACCCTAAACGTCGCAAGTTGAGCTTTGAAAATAATTATCATAAGATACCATATCACAATGATAATTATTTCTATGATGGGTTTGATCAAGATAATATTTATCCTTTGTCTTCTTCCTGCTTAATGCCGGAGTTTAAAAATTTTGATATCGGAGTTCCTCCACGTCCACCACCGCAGCCTCCGGTGTCAGCACAGAGCGTGGCGGCGAGAGGGAGGAGGAAGAAGATAGCAGAGAAGACAGCGGAGCTGGGGAAGATGGTGCCAGGAGGGAATAAGATGAACACAGCTGACATGCTTGTTTCTGCTTCCAAGTATGTCAAGTACTTGCAAGCCCAAGTTTCCATGCTTCAGCTCATGAACAACACACCCACGGAAGATAAAGCATCAAGTTGGAGTGATAATCAAAATCAGCATTTACAAGCCATGCTTGGCAGTGAGAGGGTCGAAGAGAAGCTCTACTTGCAGGAAAAGTGCTTAGTCCCACAACACTTGATCACCACCCTCACGAATCATGCTGATATCCAAACAAAACCTTCCATTCTCAAAGATCTTAACCAGTTGATCATTGTCTCAGACCCTGAGAAGAAACAGTAG 930 0.4226 MAIPLSSYFNRENLFQTLLNDPEMMSSYCPFFHEETPQPRPPDFFDSESFLFPNDNNANNFLFDDYYSSPAKLTYPSPPLPQCQTPSLPLSHHSNNINIFPVSDDDQTFQCLYPKRRKLSFENNYHKIPYHNDNYFYDGFDQDNIYPLSSSCLMPEFKNFDIGVPPRPPPQPPVSAQSVAARGRRKKIAEKTAELGKMVPGGNKMNTADMLVSASKYVKYLQAQVSMLQLMNNTPTEDKASSWSDNQNQHLQAMLGSERVEEKLYLQEKCLVPQHLITTLTNHADIQTKPSILKDLNQLIIVSDPEKKQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3019 309 SMART finulus 178 227 IPR011598 GO:0046983
Acco01g3019 309 Pfam Helix-loop-helix DNA-binding domain 180 222 IPR011598 GO:0046983
Acco01g3019 309 Gene3D - 175 235 IPR036638 GO:0046983
Acco01g3019 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 232 IPR036638 GO:0046983
Acco01g3019 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Acco01g3019 309 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 177 274 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3019 Acco-ChrAcco01 47730477 47732493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3019 114 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 39.594 9.15e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g3019 HLH 1e-05 No_clan