Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3015 ATGGATCCAAGATATGATGGCTTCCAGCCTGTGTCAGAGTCTGTAATGCAGGACCATCTGGATGGCATGCATGCTAGTAGGGGGCCATATGCCCCTAATACATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTGCACTTGAATTTATGTTGGATAGGGTGAATCTTAGGAAGCCTGTAATTACCAATGTTGGTGATCCCAATTCCGCAGCAGGTCATGGTAGTCATGCAGGATGTGAAAGAGGATCAGATATTTCTATGCGAGAAATGGTGGGCAGGGATCCAAAAGAGTATGATGGAAAGGATACATTATTACATGGAGGCAGATGCAACCATGGATCAATTCAATCAATGCCAAGAACTTCATATAATCAGGAAAATGGTCGATTTTTGCATGGGTATGCCTCTTATGGAGGTTCTGATAGCTCATCAACAACATTGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGTATTATCCGAATAAGAATGGACATATCTTGGCAGGAGCTTATGCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGATGAAGATTTGCTGAATATGATGGAGGAATGTAATCATCCACAAGATAAAGAAGGATCACAAAAGCTTAGAATTTTCTTATTCTCAATGAGTGATTTGGATGATGCTCAATTTGGTCTCAGTAGTGTGGGTGATGATTCTGAGGCCCAGTATGTTGTTGCTGTTAATTGCTTGGACTTTGGTCCAAGACTCAACTCGGTGCTTTTTGGTGCAAGCTCTTCAGCAAATGATATACTTGAATTGGACAGGCAAAATACCGAGAGAGAAGCTGGGAAAGTTCCTGTAGAATCTGTAGGTGTCAGCAACATTCCATTGACTGGGAAGTATGACTTATCATCAACCAGTCAGTCTTCAAGACCAATTCTTCCAACTTCCTCAAATGCTTATGAAACCTCTCCACTCTACAGAGACCAGATGATGCACCTTGGGGAGGTTTTTGGTCAATATCCTATTCACCATGGCCATAATCCTTCTCAAAACTTTACTCCCACTGAGACTTCTAATGCTATGCCTTTTCATGGGATGATATATCAACAAGGGATTTTGAATGAAGGTTCTCCTAATGGATTACAAGTGCAGAATTCAGAAATACCAGCAATGCTGGTGAAAAAAACGGGTGATAGCTCAGTTCCACTAGGAAGTAATCCTGCAAAAGTTCTATCCTTGGAAACACCATCCCCTGTTCCCACACTACCAAATGACGGCTTCTTGAAAAATAATGTTAACAAAGCTCCAGTTGCAATTAACATACCTGAGGGGAAACTACCCACACTGCCATCAATGAAAAAGGAGCAGCACCAGGAGTCTAAAGAGGCCTGTTCTGCATCCAGCACTGCATTTGGTCCTGGTAATGTTGATTCTCAATCCAACGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCGAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAAGTAGAATTACTGAATCGGTCTGCAAAGTCAGATGACACATATGATTCTCAGGTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTATTCAGCCACGGAATCTGGTGACATCTTGCACAATAGGAATCAGTCTAATTTAACAGAGGATTCAAGCACCTCATCAAAACCACTTTATGTGGATGGCAACATCATTTTTAATGGGCTTAACGAACTACAGATGCTCAAACTGTCGCCTGAGACGAGCAGTCAGATAAAGTCAAAACTCTCAGAACCTGTGGATTTGGAGTTGAAGGTGGTATTACCAAACAATGAAGGAAGTAAGGTGGTGGTAAATGAGGATCAGGTCATCAGATCTGAGACTGACAATTATTTCAAAGATAACCACAGCAAGCCCCTGGTTGATGAAAACAAAAACTTTAAATTAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTAAAGCCCAATGATGACCCAACATCTCATCTTCCTGAGATTACTTGGGGTCATGGCTCGGGGAAAGAATTGAATAATGATTCTATGTTGCAAGAAGTACCTGCTTCTTTGACTGGGAACACAACTGAAGACATTTCTCAAGGTTTTACATCAGATGTTCTTCCGAAACAAACACAGGCTGACATTCTTATTGACATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTATACTAAAGCAATACTTGCGGAAGATCCATCCAGTCTTCAGCCACTAACTAATATTGGAGTGGGCATAAGCATAAACATGGAAAACCATGAACCTAAGTCATGGTCATATTTTGGGAAATTGGCTCAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCCCTTGGCTTTTCACCTGAATCTGGAAATGTAGATGATAAAACTCACCTTGTCACACCACAAACACCCGATGAAATATCTGTAGACCAAGCAGATTTGCATCTCAATTTTCATGGAGAAAGTCAGAAGGATTTTCATGGAATAATTGGAACTGAAACTACTTTTGCGCAGTCTAATTATGATCATTCTCAAGTGAAGGAGACTGAAAGTATGCAGTTTGATGCTGCTGTGGAGAATTCAAGGGGTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAATAGCGGTCTACCTCCACTTGATCCTTCCCTGGGAGGTGTTGATATCAGTACCTTACAGGCCATAAGGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCAGGGACTTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATCAAAAGAATTAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTCTAGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACCTGAAAGACACTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACATTGGTTTCGGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAACTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTCGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAACAACACATTAAGGCCAACAATACCAAATTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCTGCTTCTGCTTCTCAAACCAAATCACAGCCTAACAAGCCAACCAAATGA 3696 0.4172 MDPRYDGFQPVSESVMQDHLDGMHASRGPYAPNTSEVKPVLNYSIQTGEEFALEFMLDRVNLRKPVITNVGDPNSAAGHGSHAGCERGSDISMREMVGRDPKEYDGKDTLLHGGRCNHGSIQSMPRTSYNQENGRFLHGYASYGGSDSSSTTLKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRMDISWQELMQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLLNMMEECNHPQDKEGSQKLRIFLFSMSDLDDAQFGLSSVGDDSEAQYVVAVNCLDFGPRLNSVLFGASSSANDILELDRQNTEREAGKVPVESVGVSNIPLTGKYDLSSTSQSSRPILPTSSNAYETSPLYRDQMMHLGEVFGQYPIHHGHNPSQNFTPTETSNAMPFHGMIYQQGILNEGSPNGLQVQNSEIPAMLVKKTGDSSVPLGSNPAKVLSLETPSPVPTLPNDGFLKNNVNKAPVAINIPEGKLPTLPSMKKEQHQESKEACSASSTAFGPGNVDSQSNGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQVPVSDLLSDINPQYSATESGDILHNRNQSNLTEDSSTSSKPLYVDGNIIFNGLNELQMLKLSPETSSQIKSKLSEPVDLELKVVLPNNEGSKVVVNEDQVIRSETDNYFKDNHSKPLVDENKNFKLDFPALDQVPTLKPNDDPTSHLPEITWGHGSGKELNNDSMLQEVPASLTGNTTEDISQGFTSDVLPKQTQADILIDIDDRFPRELLSDMYTKAILAEDPSSLQPLTNIGVGISINMENHEPKSWSYFGKLAQGLDNISLIDRDPLGFSPESGNVDDKTHLVTPQTPDEISVDQADLHLNFHGESQKDFHGIIGTETTFAQSNYDHSQVKETESMQFDAAVENSRGQESEFEDGKFETRNSGLPPLDPSLGGVDISTLQAIRNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDTVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVMSASASQTKSQPNKPTK 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3015 1231 MobiDBLite consensus disorder prediction 333 353 - -
Acco01g3015 1231 MobiDBLite consensus disorder prediction 479 510 - -
Acco01g3015 1231 MobiDBLite consensus disorder prediction 576 597 - -
Acco01g3015 1231 Gene3D - 171 254 - -
Acco01g3015 1231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1074 1086 IPR008271 GO:0004672|GO:0006468
Acco01g3015 1231 PRINTS Tyrosine kinase catalytic domain signature 1139 1161 IPR001245 GO:0004672|GO:0006468
Acco01g3015 1231 PRINTS Tyrosine kinase catalytic domain signature 1068 1086 IPR001245 GO:0004672|GO:0006468
Acco01g3015 1231 PRINTS Tyrosine kinase catalytic domain signature 1183 1205 IPR001245 GO:0004672|GO:0006468
Acco01g3015 1231 PRINTS Tyrosine kinase catalytic domain signature 1031 1044 IPR001245 GO:0004672|GO:0006468
Acco01g3015 1231 MobiDBLite consensus disorder prediction 105 124 - -
Acco01g3015 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 942 1036 - -
Acco01g3015 1231 Gene3D Transferase(Phosphotransferase) domain 1 1037 1231 - -
Acco01g3015 1231 MobiDBLite consensus disorder prediction 495 510 - -
Acco01g3015 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 254 - -
Acco01g3015 1231 SUPERFAMILY Protein kinase-like (PK-like) 941 1211 IPR011009 -
Acco01g3015 1231 MobiDBLite consensus disorder prediction 908 932 - -
Acco01g3015 1231 ProSiteProfiles Protein kinase domain profile. 949 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3015 1231 PANTHER SERINE-THREONINE PROTEIN KINASE 193 1213 - -
Acco01g3015 1231 Gene3D Phosphorylase Kinase; domain 1 942 1036 - -
Acco01g3015 1231 CDD PB1_UP2 156 252 - -
Acco01g3015 1231 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1037 1229 - -
Acco01g3015 1231 SUPERFAMILY CAD & PB1 domains 169 259 - -
Acco01g3015 1231 CDD STKc_MAP3K-like 955 1212 - -
Acco01g3015 1231 SMART PB1_new 167 254 IPR000270 GO:0005515
Acco01g3015 1231 Pfam Protein tyrosine and serine/threonine kinase 950 1212 IPR001245 GO:0004672|GO:0006468
Acco01g3015 1231 ProSitePatterns Protein kinases ATP-binding region signature. 955 980 IPR017441 GO:0005524
Acco01g3015 1231 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Acco01g3015 1231 SMART serkin_6 949 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3015 Acco-ChrAcco01 47700330 47707154 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3015 1 608 MAP Kinase Kinase Kinase AT1G16270 40.147 1.10e-94 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco01g3015 PK_Tyr_Ser-Thr 2.1e-62 CL0016