LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco01g3015	ATGGATCCAAGATATGATGGCTTCCAGCCTGTGTCAGAGTCTGTAATGCAGGACCATCTGGATGGCATGCATGCTAGTAGGGGGCCATATGCCCCTAATACATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTGCACTTGAATTTATGTTGGATAGGGTGAATCTTAGGAAGCCTGTAATTACCAATGTTGGTGATCCCAATTCCGCAGCAGGTCATGGTAGTCATGCAGGATGTGAAAGAGGATCAGATATTTCTATGCGAGAAATGGTGGGCAGGGATCCAAAAGAGTATGATGGAAAGGATACATTATTACATGGAGGCAGATGCAACCATGGATCAATTCAATCAATGCCAAGAACTTCATATAATCAGGAAAATGGTCGATTTTTGCATGGGTATGCCTCTTATGGAGGTTCTGATAGCTCATCAACAACATTGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGAAAACTTAGATATGTTGGAGGTGAAACACGTATTATCCGAATAAGAATGGACATATCTTGGCAGGAGCTTATGCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGATGAAGATTTGCTGAATATGATGGAGGAATGTAATCATCCACAAGATAAAGAAGGATCACAAAAGCTTAGAATTTTCTTATTCTCAATGAGTGATTTGGATGATGCTCAATTTGGTCTCAGTAGTGTGGGTGATGATTCTGAGGCCCAGTATGTTGTTGCTGTTAATTGCTTGGACTTTGGTCCAAGACTCAACTCGGTGCTTTTTGGTGCAAGCTCTTCAGCAAATGATATACTTGAATTGGACAGGCAAAATACCGAGAGAGAAGCTGGGAAAGTTCCTGTAGAATCTGTAGGTGTCAGCAACATTCCATTGACTGGGAAGTATGACTTATCATCAACCAGTCAGTCTTCAAGACCAATTCTTCCAACTTCCTCAAATGCTTATGAAACCTCTCCACTCTACAGAGACCAGATGATGCACCTTGGGGAGGTTTTTGGTCAATATCCTATTCACCATGGCCATAATCCTTCTCAAAACTTTACTCCCACTGAGACTTCTAATGCTATGCCTTTTCATGGGATGATATATCAACAAGGGATTTTGAATGAAGGTTCTCCTAATGGATTACAAGTGCAGAATTCAGAAATACCAGCAATGCTGGTGAAAAAAACGGGTGATAGCTCAGTTCCACTAGGAAGTAATCCTGCAAAAGTTCTATCCTTGGAAACACCATCCCCTGTTCCCACACTACCAAATGACGGCTTCTTGAAAAATAATGTTAACAAAGCTCCAGTTGCAATTAACATACCTGAGGGGAAACTACCCACACTGCCATCAATGAAAAAGGAGCAGCACCAGGAGTCTAAAGAGGCCTGTTCTGCATCCAGCACTGCATTTGGTCCTGGTAATGTTGATTCTCAATCCAACGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCGAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAAGTAGAATTACTGAATCGGTCTGCAAAGTCAGATGACACATATGATTCTCAGGTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCAGTATTCAGCCACGGAATCTGGTGACATCTTGCACAATAGGAATCAGTCTAATTTAACAGAGGATTCAAGCACCTCATCAAAACCACTTTATGTGGATGGCAACATCATTTTTAATGGGCTTAACGAACTACAGATGCTCAAACTGTCGCCTGAGACGAGCAGTCAGATAAAGTCAAAACTCTCAGAACCTGTGGATTTGGAGTTGAAGGTGGTATTACCAAACAATGAAGGAAGTAAGGTGGTGGTAAATGAGGATCAGGTCATCAGATCTGAGACTGACAATTATTTCAAAGATAACCACAGCAAGCCCCTGGTTGATGAAAACAAAAACTTTAAATTAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTAAAGCCCAATGATGACCCAACATCTCATCTTCCTGAGATTACTTGGGGTCATGGCTCGGGGAAAGAATTGAATAATGATTCTATGTTGCAAGAAGTACCTGCTTCTTTGACTGGGAACACAACTGAAGACATTTCTCAAGGTTTTACATCAGATGTTCTTCCGAAACAAACACAGGCTGACATTCTTATTGACATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTATACTAAAGCAATACTTGCGGAAGATCCATCCAGTCTTCAGCCACTAACTAATATTGGAGTGGGCATAAGCATAAACATGGAAAACCATGAACCTAAGTCATGGTCATATTTTGGGAAATTGGCTCAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCCCTTGGCTTTTCACCTGAATCTGGAAATGTAGATGATAAAACTCACCTTGTCACACCACAAACACCCGATGAAATATCTGTAGACCAAGCAGATTTGCATCTCAATTTTCATGGAGAAAGTCAGAAGGATTTTCATGGAATAATTGGAACTGAAACTACTTTTGCGCAGTCTAATTATGATCATTCTCAAGTGAAGGAGACTGAAAGTATGCAGTTTGATGCTGCTGTGGAGAATTCAAGGGGTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAATAGCGGTCTACCTCCACTTGATCCTTCCCTGGGAGGTGTTGATATCAGTACCTTACAGGCCATAAGGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCAGGGACTTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATCAAAAGAATTAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTCTAGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACCTGAAAGACACTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACATTGGTTTCGGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAACTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTCGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAACAACACATTAAGGCCAACAATACCAAATTCTTGTGATGCTGAATGGAGGACACTAATGGAGCAATGTTGGGCACCCAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCTGCTTCTGCTTCTCAAACCAAATCACAGCCTAACAAGCCAACCAAATGA	3696	0.4172	MDPRYDGFQPVSESVMQDHLDGMHASRGPYAPNTSEVKPVLNYSIQTGEEFALEFMLDRVNLRKPVITNVGDPNSAAGHGSHAGCERGSDISMREMVGRDPKEYDGKDTLLHGGRCNHGSIQSMPRTSYNQENGRFLHGYASYGGSDSSSTTLKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRMDISWQELMQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLLNMMEECNHPQDKEGSQKLRIFLFSMSDLDDAQFGLSSVGDDSEAQYVVAVNCLDFGPRLNSVLFGASSSANDILELDRQNTEREAGKVPVESVGVSNIPLTGKYDLSSTSQSSRPILPTSSNAYETSPLYRDQMMHLGEVFGQYPIHHGHNPSQNFTPTETSNAMPFHGMIYQQGILNEGSPNGLQVQNSEIPAMLVKKTGDSSVPLGSNPAKVLSLETPSPVPTLPNDGFLKNNVNKAPVAINIPEGKLPTLPSMKKEQHQESKEACSASSTAFGPGNVDSQSNGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQVPVSDLLSDINPQYSATESGDILHNRNQSNLTEDSSTSSKPLYVDGNIIFNGLNELQMLKLSPETSSQIKSKLSEPVDLELKVVLPNNEGSKVVVNEDQVIRSETDNYFKDNHSKPLVDENKNFKLDFPALDQVPTLKPNDDPTSHLPEITWGHGSGKELNNDSMLQEVPASLTGNTTEDISQGFTSDVLPKQTQADILIDIDDRFPRELLSDMYTKAILAEDPSSLQPLTNIGVGISINMENHEPKSWSYFGKLAQGLDNISLIDRDPLGFSPESGNVDDKTHLVTPQTPDEISVDQADLHLNFHGESQKDFHGIIGTETTFAQSNYDHSQVKETESMQFDAAVENSRGQESEFEDGKFETRNSGLPPLDPSLGGVDISTLQAIRNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDTVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNSCDAEWRTLMEQCWAPNPAARPSFTEIASRLRVMSASASQTKSQPNKPTK	1231

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco01g3015	1231	MobiDBLite	consensus disorder prediction	333	353	-	-
	Acco01g3015	1231	MobiDBLite	consensus disorder prediction	479	510	-	-
	Acco01g3015	1231	MobiDBLite	consensus disorder prediction	576	597	-	-
	Acco01g3015	1231	Gene3D	-	171	254	-	-
	Acco01g3015	1231	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1074	1086	IPR008271	GO:0004672\|GO:0006468
	Acco01g3015	1231	PRINTS	Tyrosine kinase catalytic domain signature	1139	1161	IPR001245	GO:0004672\|GO:0006468
	Acco01g3015	1231	PRINTS	Tyrosine kinase catalytic domain signature	1068	1086	IPR001245	GO:0004672\|GO:0006468
	Acco01g3015	1231	PRINTS	Tyrosine kinase catalytic domain signature	1183	1205	IPR001245	GO:0004672\|GO:0006468
	Acco01g3015	1231	PRINTS	Tyrosine kinase catalytic domain signature	1031	1044	IPR001245	GO:0004672\|GO:0006468
	Acco01g3015	1231	MobiDBLite	consensus disorder prediction	105	124	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco01g3015	Acco-ChrAcco01	47700330	47707154	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco01g3015	1	608	MAP Kinase Kinase Kinase	AT1G16270	40.147	1.10e-94	327

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Acco01g3015		PK_Tyr_Ser-Thr	2.1e-62	CL0016

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