Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3013 ATGCAGAAACAGCAACAGTACAATACCATGGAACCTAGAAATGAGGAACTCCATTCTGCACCACAGTCTACCATGCAGGACCATCTTGAAGGTATGCGTATCAACATGAGGCCAGCTGACCGTAACATGTCAGATAAAAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTGCCCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGTGATCCCAATTATGCAACGGGTTATATGGAATTGAAGGGTATCTTAGGCATTAATCATTCGGGATCTGAAAGTGGATCAGATATTTCTATGCTCCCAAAAGTCGAAAAAGGTCCCAAAGAATTTGACAGAAGAAGTTCTTCTTTGCAACGGGACAGAAGCAACTATGGCTCAGTTCGATCGATCCCTAGAACTTCATCTAATCAAGAAAATAACCGAATCCTTCACGGTCTTGCTTCTTCTGAACCTTCTACTGGCTCATCAATGAAGATGAAGGTCCTTTGTAGTTTTGGTGGTAAAATATTGCCACGCCCCCGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACTCGTATTATTAGTATCAGAAGGGACATAACTTGGCGGGAGCTGATGCAGAAAGCCTTATCACTCTATAATGAAACTCATGCTATTAAGTATCAGCTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGATGAGGATCTGCGAAATATGATGGAGGAATGCAATGATCTAAACAGAGCAGGATCACAAAAACTTAGGATGTTTCTGCTTTCCATGGTCGATATGGATGATCCTAGTGTTGATGGTGACACGGAAATCCAGTATGTAGTGGCTGTTAATGGCATGGACTTGGGATCAAGGAACCATTCATTCCTTCATGCTGCAAACTCTTCTGCTGATAATTTACATGAACTAGATGGACAGAATATTGAGAGGGAGGCCAGTAGAACTCAGATAGAATCAACTGGAGCTATTAGTACTTCTTGGACTGCCAATGCTAACTCATCATTGGGAATTCAGTCTTCACAACCGGTGATTCCAACTGCGTCAAGTGCTTATGAAAGCAATATGTTGTTTCATAGTAACCATCATGGGGAATCCAGTCAATATCCAGTGCACTATGGTGTTGATTCTTCTAACAACTCAGCTTTTAGACAGATTCCAGTTTCTGTGCCTACACATGTTCTGAACAATCAAGGAATTATCAATGATGGGTTTCCACCTGAGGTGTTGCAAGCACAAAATTCAGAAATGCCAGCTATTCAGATAAAGAAAAGGGGTGATAGTTCCATTAAGCATGAAGGCGACTCAGGAAAAGGCTTATCCTCAGATACACTGTATCCTGTCCCTCCAAAATCTGGAAAAGGCTTATCCTCAGATACACTGTATCCTGTCCCTCCACAACCGTTTGATGGAAATTTACCGGGTAATTTTTCAGAAGCATCAGTTACAAATGCTGTACCAGGGGCACACCTACATAAATTGCCTTCAAAAAGCAAGGGCAAGCACCAACATTATGAAGAGGCCTCTTCATTGGCTAATGCAGTGAATTCCACTCAGATTCCAAAGTCTGGTGAAGATGACCTCTATTCTACCTCTACTACTAATGCTTTCAATCCTTCTTATGTTGATGCTGGGTCCAATGTTATTGATTTGAGTTGCCTTGAGCCACCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATCCCTAGAGAGCAGGCGGATTTGCTGAACCGATCCACAAAATCAGATGATGCATGCGGCTCTCAGGTTCTCATGTCTGATTTGCTCTCTGACTTAGACCAACAGAATTCAACTGCTGAATCAAGTGATAAGTTCCAGGTTGGACATCTGTCAAATCTGACTGCAGTGTCAAGCATGACAGCAATACAGTCGAATACAAATGGCCATGCCACTGACAATGGGCTTGCCCAGATACAAAATCATAAACAGTTGCCAGATGCAAACAACACAGATAAAAAAGTTGCTGCAAATGAGGATCGGGTCCTTAGATCTGAAAGTGACACCAATTTATCCAAAGATAACCATAAAAATTGCCTAGTTGATGAAACCAAAAGCACTGAACATCCTGCTTTTCACAAGGTTCCATCTGATCGTAAGTTGGGTGATGCTTCTAACAAAGAATTTAGTAATGATGCTAAGGTTCAAGCACAGCCCTTTTTTTTAACTGGGAACATGAGCCAAGATATTTCTCAAGGTGTACCCACAGATGATGTTTCCACACCTTCTCAGGGTGACATTATGATTGATATTGATGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTTTCCAAGGCAATACACTCTGAAGATTCCTCAAGTATTAGTCCATTGCCAACAGATGGAACAGGCTTGAGCTTAAATGTGGAAAATCATGAGCCAAAAAGTTGGTCATATTTTCAGAAGTTGGCAAATGACAGGTTTGATAACGTGTCTCTAATTGATCAAGATCATCTAGGTTTTTCGTCTACGTTAAGAACAGTACAAGAAGGAGATAGTAGATCTCAGCAAGTTGCACCCCCGCCAGCTGATGGAGTTTCAGTAGGCCATGATTTTGGTAAAGAAAATCAGAAAAATTTGCCTGTGACAACTAGAACAGAGGCCCCGGTTCTGCAGCCAAACTATGATCAAACCCAAGTTATTGAGACTGAAATCAAGAATTTGGATCCAGTAAAGGGAAACGCAAAAGTAAAAGACTCTGAATATGAGGATGGCAAGAATGAAGCAGGGAATATGGATCATCCGCATGATCCTTCTTTGGAGGATATTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACTTTTGGGACTGTATACCATGGAAAATGGAGGGGAACGGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTAGATCTTCAGAACAAGAGAGACTGGCCTTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTCTATGGTGTAGTGCAGGACGGGCCTGGAGGAACACTAGCTACTGTTACAGAATTCATGGTTGATGGTTCTCTAAGGCATGTTTTGCTTCGTAAGGATAGGTACCTAGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTACTTGTGAACTTAAAGGATCCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCACCTGAGCTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGATGTGTTCTCGTTTGGCATTGTATTATGGGAAATTCTTACTGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCCAGTTATTGTGATTCTGAGTGGCGGCTTCTAATGGAGCAGTGTTGGGCACCTAACCCTTCAGTGAGGCCATCATTCACAGAAATTGCTCGCCGCTTAAGGGTGATGTCAGCAGCTGCTAGTCAGACCAAAGGGCAAGGCTACAAGGCATCTAAGTGA 3720 0.4194 MQKQQQYNTMEPRNEELHSAPQSTMQDHLEGMRINMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIMGDPNYATGYMELKGILGINHSGSESGSDISMLPKVEKGPKEFDRRSSSLQRDRSNYGSVRSIPRTSSNQENNRILHGLASSEPSTGSSMKMKVLCSFGGKILPRPRDGKLRYVGGETRIISIRRDITWRELMQKALSLYNETHAIKYQLPGEDLDALVSVSSDEDLRNMMEECNDLNRAGSQKLRMFLLSMVDMDDPSVDGDTEIQYVVAVNGMDLGSRNHSFLHAANSSADNLHELDGQNIEREASRTQIESTGAISTSWTANANSSLGIQSSQPVIPTASSAYESNMLFHSNHHGESSQYPVHYGVDSSNNSAFRQIPVSVPTHVLNNQGIINDGFPPEVLQAQNSEMPAIQIKKRGDSSIKHEGDSGKGLSSDTLYPVPPKSGKGLSSDTLYPVPPQPFDGNLPGNFSEASVTNAVPGAHLHKLPSKSKGKHQHYEEASSLANAVNSTQIPKSGEDDLYSTSTTNAFNPSYVDAGSNVIDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDACGSQVLMSDLLSDLDQQNSTAESSDKFQVGHLSNLTAVSSMTAIQSNTNGHATDNGLAQIQNHKQLPDANNTDKKVAANEDRVLRSESDTNLSKDNHKNCLVDETKSTEHPAFHKVPSDRKLGDASNKEFSNDAKVQAQPFFLTGNMSQDISQGVPTDDVSTPSQGDIMIDIDDRFPRDFLYDMFSKAIHSEDSSSISPLPTDGTGLSLNVENHEPKSWSYFQKLANDRFDNVSLIDQDHLGFSSTLRTVQEGDSRSQQVAPPPADGVSVGHDFGKENQKNLPVTTRTEAPVLQPNYDQTQVIETEIKNLDPVKGNAKVKDSEYEDGKNEAGNMDHPHDPSLEDIDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLALEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRLLMEQCWAPNPSVRPSFTEIARRLRVMSAAASQTKGQGYKASK 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3013 1239 CDD PB1_UP2 174 268 - -
Acco01g3013 1239 MobiDBLite consensus disorder prediction 436 458 - -
Acco01g3013 1239 MobiDBLite consensus disorder prediction 114 130 - -
Acco01g3013 1239 CDD STKc_MAP3K-like 963 1220 - -
Acco01g3013 1239 SMART PB1_new 185 271 IPR000270 GO:0005515
Acco01g3013 1239 SUPERFAMILY Protein kinase-like (PK-like) 948 1219 IPR011009 -
Acco01g3013 1239 MobiDBLite consensus disorder prediction 103 153 - -
Acco01g3013 1239 ProSiteProfiles Protein kinase domain profile. 957 1222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3013 1239 Pfam PB1 domain 186 268 IPR000270 GO:0005515
Acco01g3013 1239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Acco01g3013 1239 SUPERFAMILY CAD & PB1 domains 187 270 - -
Acco01g3013 1239 Pfam Protein tyrosine and serine/threonine kinase 958 1220 IPR001245 GO:0004672|GO:0006468
Acco01g3013 1239 MobiDBLite consensus disorder prediction 1 26 - -
Acco01g3013 1239 MobiDBLite consensus disorder prediction 851 878 - -
Acco01g3013 1239 ProSitePatterns Protein kinases ATP-binding region signature. 963 988 IPR017441 GO:0005524
Acco01g3013 1239 Gene3D - 189 271 - -
Acco01g3013 1239 Gene3D Phosphorylase Kinase; domain 1 950 1044 - -
Acco01g3013 1239 SMART serkin_6 957 1223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3013 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 190 271 - -
Acco01g3013 1239 MobiDBLite consensus disorder prediction 131 153 - -
Acco01g3013 1239 Gene3D Transferase(Phosphotransferase) domain 1 1045 1238 - -
Acco01g3013 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 950 1044 - -
Acco01g3013 1239 PRINTS Tyrosine kinase catalytic domain signature 1076 1094 IPR001245 GO:0004672|GO:0006468
Acco01g3013 1239 PRINTS Tyrosine kinase catalytic domain signature 1039 1052 IPR001245 GO:0004672|GO:0006468
Acco01g3013 1239 PRINTS Tyrosine kinase catalytic domain signature 1147 1169 IPR001245 GO:0004672|GO:0006468
Acco01g3013 1239 PRINTS Tyrosine kinase catalytic domain signature 1191 1213 IPR001245 GO:0004672|GO:0006468
Acco01g3013 1239 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1045 1237 - -
Acco01g3013 1239 PANTHER SERINE-THREONINE PROTEIN KINASE 215 1221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3013 Acco-ChrAcco01 47686479 47692180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3013 8 1149 MAP Kinase Kinase Kinase AT1G79570 45.410 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco01g3013 PK_Tyr_Ser-Thr 1.3e-61 CL0016