Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3011 ATGGAAGATGTCAACATCTGGCTTTCCTTCTCCACGAATGAGAATCCCAACCATGATTTCGCCATTCGAAGGTTTTGTCCTGCAAGAATAGAAGAGCAAGAGCAAGGAGATCTGAGCCAAGATCATCAAGGACCACCACCAATAGCACCTGATGAAACAGAACTTTCTTCTTCTGAAGCTGCCACCACAAGCACTCCATGTCTGGCCTCTTCAGATGTCGATGAATTTGTTGACAGCTTCATCAACATGGACCAGCCTGACGACAATGAGTATGCCAATGATGAAGATCAAGAACATCAAGAGAATCATCATCATCATCAACATGATCAAACTTATGATCACTTCATGGTGAATGATGGAGACGAGAAGGTTGATCCATTCTATATGATAAATGAAGAAGCTTATGGGTATCTTCCAATCACAATGCAGGAAGAAGAAGAAATGGAGATGAAGGGCTCCTTTGATGCAGAAGAAGAGATGAGTCTTGGTATGGACAAAGGATTAGATTTGGTTCATATGCTATTAGCTTGTGCTGAGGCTGTGAGTTGCAGAGACATTCAGCAAGCAGACTTGCTGCTCAGAAAAATTTGGTCTTTGGCTACTCCATGGGGTGACTCGTTACAGAGAGTCGCCTATTGTTTTGCTGAAGGGTTGAAGTGCAGATTGTCACTTCTTCCTCACAAGGTATCTGCAAATGGTGCGGTAAAAAACAGTACTACTATAAATGCCTCTTTGGTAACTAGGGAGATGAAGTTGGAAGCTTTTCATCTCCTTTACCAGACTACACCATATATAGCTTTTGGTTACATGGCTGCAAATGAAGCTATATGCCAAGCATCACAAGGGAAAAACTCCTTACACATAATTGATCTTGGAATGGAACAAACCCTTCAATGGTCTTCCTTGATAAGGGCACTTGCCTCGAGGCCCGAGGGCGCTCCAAGGGTGCGGATTACAGGGTTAATAGACTATGATAGTGATGATGAACTGAAACTTCAATCAGGCGTGAGTTTGCTTGTGGAGGAGGCAAGCTCCTTTGGGATAGCACTTGAGTTCCACATAATATCAGAGCCAGCAACCCCATCTCTTCTAACTAAGGAGAAGCTGAACTTGAGAGAAGGAGAAGCCTTGTTTGTTAATTGCATCCTTCACTTGCACAAGTATGTTAAAGAAAGTAGGGGCTATCTCAAGGCAATTCTGCAATCAATCAAGAAGTTAGGTCCTACTGCACTAACTGTAGTAGAGCAAGATTCAAACCACAATGGGCCTTTCTTTCTTGGTAGGTTTCTAGAATCATTACACTATTACTCTGCCATTTTTGACTCACTCGAGGCAAGTATGCCGAGAAATAGCCAACCGAGGAGGAAAATCGAAAGATCGTATTTTGCAGAAGAGATCCGCAACATTGTCGCTTATGAAGGGCCTCATAGGATGGAAAGGCATGAGAGTGTAGATCAATGGAGAAGGCAACTGGGAAGAGCAGGGTTTCAAGTCATGGCATTGAAGTGCACAAATCAAGTAAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACACCGTCCAGTGAGAAGGGTTGTCTTCTGCTTGGGTGGAGAGGAAGGTCAATAATGATGGCTTCTGCTTGGCGAGTTGCAACTTCGTAA 1647 0.4323 MEDVNIWLSFSTNENPNHDFAIRRFCPARIEEQEQGDLSQDHQGPPPIAPDETELSSSEAATTSTPCLASSDVDEFVDSFINMDQPDDNEYANDEDQEHQENHHHHQHDQTYDHFMVNDGDEKVDPFYMINEEAYGYLPITMQEEEEMEMKGSFDAEEEMSLGMDKGLDLVHMLLACAEAVSCRDIQQADLLLRKIWSLATPWGDSLQRVAYCFAEGLKCRLSLLPHKVSANGAVKNSTTINASLVTREMKLEAFHLLYQTTPYIAFGYMAANEAICQASQGKNSLHIIDLGMEQTLQWSSLIRALASRPEGAPRVRITGLIDYDSDDELKLQSGVSLLVEEASSFGIALEFHIISEPATPSLLTKEKLNLREGEALFVNCILHLHKYVKESRGYLKAILQSIKKLGPTALTVVEQDSNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQPRRKIERSYFAEEIRNIVAYEGPHRMERHESVDQWRRQLGRAGFQVMALKCTNQVRMMLSVYDCDGYTPSSEKGCLLLGWRGRSIMMASAWRVATS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3011 548 MobiDBLite consensus disorder prediction 55 69 - -
Acco01g3011 548 Pfam GRAS domain family 170 544 IPR005202 -
Acco01g3011 548 ProSiteProfiles GRAS family profile. 161 544 IPR005202 -
Acco01g3011 548 MobiDBLite consensus disorder prediction 96 111 - -
Acco01g3011 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 128 543 IPR005202 -
Acco01g3011 548 MobiDBLite consensus disorder prediction 83 111 - -
Acco01g3011 548 MobiDBLite consensus disorder prediction 31 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3011 Acco-ChrAcco01 47683367 47685013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3011 165 545 GRAS Transcription Factor Family AT1G66350 37.565 1.47e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3011 GRAS 9.7e-109 CL0063