Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3010 ATGGATCAATCGGAGCAGGCACAAAAGCAGCAGCAAAAGCATGTGGTCGGAGTTGCCACTGGGCCTGGCCAGATGGCTTATTCTACTCACTACCAAACTGCCCCCATGGTAGCTTCTGGAACACCAGCTGTAGCTGGACCTTCCCCAACACAGCCTCCGGCCCCCTTCTCAAACCCCCCTCATCAAATTGCATACCAGCAAGCACATCATTTCCACCACCAACAGCAGCAGCAGCAACAACAACTTCAGATTTTTTGGGCGAACCAAATGCAAGAAATCGAGCAAACAACTGACTTCAAGAATCATAGTCTTCCACTTGCTAGAATTAAAAAAATAATGAAAGCTGATGAGGATGTCCGGATGATTTCAGCGGAGGCCCCTGTCATATTTGCAAAAGCATGTGAAATGTTTATCCTGGAATTGACTCTGCGATCGTGGATCCACACGGAAGAAAACAAGAGGAGAACACTACAGAAGAATGATATAGCAGCTGCTATTTCTAGGACCGACGTTTTCGATTTCTTGGTTGACATTATCCCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAGTTACAAAGGCTACAATTCCAGTTGTGGGTTCCCCAGCTGATATGCCTTATTATTATGTCCCACCTCAGCATCCTGCGGGACCTGCTGGGATGATCATGGGAAAACCTGTTGACCAGGCAGCACTATATGCTACCCAACAGCCTCGACCTCCTCATATGGCGTTCATGCCTTGGCCGCACACACAACCTTCACAACAGCCGCCACCTGATCAGCAACAACCAGACACTTGA 801 0.4806 MDQSEQAQKQQQKHVVGVATGPGQMAYSTHYQTAPMVASGTPAVAGPSPTQPPAPFSNPPHQIAYQQAHHFHHQQQQQQQQLQIFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVVGSPADMPYYYVPPQHPAGPAGMIMGKPVDQAALYATQQPRPPHMAFMPWPHTQPSQQPPPDQQQPDT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3010 266 FunFam Nuclear transcription factor Y subunit gamma 69 181 - -
Acco01g3010 266 MobiDBLite consensus disorder prediction 239 266 - -
Acco01g3010 266 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 52 225 - -
Acco01g3010 266 MobiDBLite consensus disorder prediction 242 266 - -
Acco01g3010 266 SUPERFAMILY Histone-fold 64 175 IPR009072 GO:0046982
Acco01g3010 266 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Acco01g3010 266 Pfam Core histone H2A/H2B/H3/H4 67 166 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3010 Acco-ChrAcco01 47675796 47676596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3010 82 213 CCAAT-HAP5 Transcription Factor Family AT1G56170 90.977 1.80e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco01g3010 Histone 2.8e-18 CL0012