Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3001 ATGGCAGCTGCTAAGGTGCACCAGACGCCTTTGAATTCCATTTCTTGTTTCTCGATTATGCTATCTTTTTCCTTTTCGAATTTCTTGTGTGATTTTCCTAAGTTGCAGGGAAAATCTAAAGTGGCTTTAACCCGTGTCTTTGAAGATGGCCAAGCTCGTAAAAATGTGGGTGGTAGAAGTTTTAAGGTTCTATCGGACAATGAGCATCTCAAAATGGGCGACGGAGAGCTCAAAAAAACTGTAACAGAAGCCAGTGCGCATGCAAGAAGGAGTGCTTTGGTAGCTAACAAAGGTGTTATCTTGAACACTGCCAGTAATTCAAAGGGTGGCTTCAAAAGTAGGAATAAAAGTAGTGGCATATACGCCAATTCTGCAAATATGAAAGCGAGAAAGGCATTGGCTGATGTTAGCAATATTCAAGGCAGTTTTGCAAGGAATATTAAACAAGATGCTTCTAATATGAAGGTTTTAGCCAGTACAGGCACCAAGTTAGGGGATGCCTCTTCAAGGAGGTCCTTTACGGGGAGACTGCAAAGGAATGTAAGTCTAGTTGAAGGTCAGTTAGATGCTTCTAAGAGAGGCACTAGTTCAATAGTGCCCTTAGCTGCTCAGAGGATTAATAAAAATGGAGGAAGATCATCTGTTGCCACAGAGAACAGGACTGCAAAGAAGTCTCTCTTACCTTCAGTGACAAGGAGGTCTTTACCTGTGCCAAGGAAGGTCAATAGGGAAGACATGAGCAACAGAAAGGGTAATGCTAGAAGTTTTGATACGGCGGAAAAAATAAGCAGAATACCAACTAAGGCAGAAACAGTGAGAAAAGTTGCCCCTCAATTATCTAGTGCAAGAAACCATCTGTGGAAGACTCGAGCGAGTGATGGCCATGTTCATATTAATCTGGGAGCTAGGGTTAAAACCAATGCTTTACATGCGTCCTCAAGGAAGTCCATCAAGCCTCTCGTTAAGACCACACATAAGTCTTCTAACGCACCTAGGACTTCAAAATCTAAGTCCAAATCAGCTGCTTCAATTTCATCACAGGATGAGGAAGCAGTTGCTTTGTCTCTCCCTGAGAATAATTTACCTGCGGTATCCAATGATGCAAATGAAGGGCAGCTTCGATCTGTTGCAGACAGCAACCCGAGAACAAAATCATTTGAGATAACTGGAAGGAAAAAGTCCACCCGTCGGAAATCTTATACAACTTTGTTACTGGAAAGATCTAAGCTTCTCAAGGAAAATGGTGAAATAACTGAGCAAGATGACCTACCAAATATTGATGATGAATGCAATCAACTAGAAGTTTCTGAGTATATTGATGAAATATATCAGTACTATTGGATCACTGAGGCTCAAACTTCGGCTCGTGAAAATTACCTGTCTATTCAGACAGACATTACACCTCATATGCGGGGCATATTGATCAACTGGTTAATTGAAGTACACTTGAAATTTGAGTTGATGCCAGAAACCCTGCATCTCACAGTTTCATTATTGGATCAATACCTATCTCTGGTGACGATTAAAAAGAATGAATTGCAGTTAGTTGGTCTCACTGCGCTTTTGCTGGCCTCAAAATATGAGGATTTTTGGCATCCTAGTGTCAAAGAGTTGGTAAGCATTTCAGTTGAATCATATACTAGAGAACAAATACTTGCAATGGAGAAGCTTATTATTAGAATGTTGAAGTTCCGTCTTAATGGCCCCACTCCTTTTGTTTTCATGGTGAGGTTTTTGAAGGCAGCTCAGTCAGACAAAAAGCTGGAACATTTGGCATTCTTTCTCATTGAACTGTGCTTAGTTGAATATGAAGCCTTGGCATTCAAGTCCTCACTGCTATGTGCATCCGCAATCTATGTTGCTCGTTGCACCCTGCAAATCACCCCACCATGGACTCCGTTGCTTCAGAAGCATGCTCGTTATGAAGTTTCCCATTTAAGGCATGATTCTATATTCTCCTGGACCCCACTTATTATGCCAAGTGCTAACCTCATCATTTGCAGGAATTGTGCGGAGATGATATTGAAATTCCATAAATCAGCAAGAACAGGAAAGCTAATGGTTGCATATGAGAAATATTCAAGGCCAGAACTCAGTGGGGTTGCAGCACTGAAGCCGGTAGATAGCCTTCCTCTCTGA 2139 0.4156 MAAAKVHQTPLNSISCFSIMLSFSFSNFLCDFPKLQGKSKVALTRVFEDGQARKNVGGRSFKVLSDNEHLKMGDGELKKTVTEASAHARRSALVANKGVILNTASNSKGGFKSRNKSSGIYANSANMKARKALADVSNIQGSFARNIKQDASNMKVLASTGTKLGDASSRRSFTGRLQRNVSLVEGQLDASKRGTSSIVPLAAQRINKNGGRSSVATENRTAKKSLLPSVTRRSLPVPRKVNREDMSNRKGNARSFDTAEKISRIPTKAETVRKVAPQLSSARNHLWKTRASDGHVHINLGARVKTNALHASSRKSIKPLVKTTHKSSNAPRTSKSKSKSAASISSQDEEAVALSLPENNLPAVSNDANEGQLRSVADSNPRTKSFEITGRKKSTRRKSYTTLLLERSKLLKENGEITEQDDLPNIDDECNQLEVSEYIDEIYQYYWITEAQTSARENYLSIQTDITPHMRGILINWLIEVHLKFELMPETLHLTVSLLDQYLSLVTIKKNELQLVGLTALLLASKYEDFWHPSVKELVSISVESYTREQILAMEKLIIRMLKFRLNGPTPFVFMVRFLKAAQSDKKLEHLAFFLIELCLVEYEALAFKSSLLCASAIYVARCTLQITPPWTPLLQKHARYEVSHLRHDSIFSWTPLIMPSANLIICRNCAEMILKFHKSARTGKLMVAYEKYSRPELSGVAALKPVDSLPL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3001 712 SUPERFAMILY Cyclin-like 431 567 IPR036915 -
Acco01g3001 712 FunFam Cyclin N-terminal domain containing 2 456 567 - -
Acco01g3001 712 MobiDBLite consensus disorder prediction 322 384 - -
Acco01g3001 712 SMART cyclin_7 573 667 IPR013763 -
Acco01g3001 712 SMART cyclin_7 476 560 IPR013763 -
Acco01g3001 712 MobiDBLite consensus disorder prediction 233 254 - -
Acco01g3001 712 PANTHER CYCLINS 382 685 IPR039361 -
Acco01g3001 712 Pfam Cyclin, C-terminal domain 569 647 IPR004367 -
Acco01g3001 712 Gene3D - 455 561 - -
Acco01g3001 712 SMART Cyclin_C_2 569 707 IPR004367 -
Acco01g3001 712 Pfam Cyclin, N-terminal domain 441 567 IPR006671 -
Acco01g3001 712 MobiDBLite consensus disorder prediction 237 254 - -
Acco01g3001 712 Gene3D - 562 710 - -
Acco01g3001 712 MobiDBLite consensus disorder prediction 307 393 - -
Acco01g3001 712 CDD CYCLIN_CCNB1-like_rpt1 435 564 - -
Acco01g3001 712 SUPERFAMILY Cyclin-like 569 709 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3001 Acco-ChrAcco01 47622144 47628482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3001 45 712 Core Cell Cycle Gene Families AT1G16330 44.217 9.28e-166 489