Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2977 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCTCATGACAGACCAATGTGTGTTCAAGGCGACTCAGGCCTTGTCCTCACCACCGACCCCAAGCCTCGTCTTCGTTGGACCGTCGAACTCCATGAACGCTTCGTTGATGCCGTCACTCAGCTCGGTGGCCCTGATAAGGCCACGCCTAAAACCATCATGAGGGTTATGGGAGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTCGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATAGCATGAGAGCTTCGGCTTTAGAGCTTCAACGAAACAACGCTCCTCCATCTGCCATGATTGGTCGCAACATGAACGAGATGCAAATGGAGGTGCAGAGGAGACTGCATGAACAGCTTGAGGTCCAGAAACACCTTCAGCTAAGAATTGAAGCTCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCTGCCGCCAATAATTTAAAGGGAAATATCAATATTGGAGCAGCTCAAGCCATCCCTGAAATAGGAGTCATGAAAGATTTCAGTTCACCTCTTAGTTTTCCTTTTCAAGAACTCAACATCTACGGTGGAGGCGGTAGTGGAGGTGGCTGCAGCGACCAACTTGATCATCATCTTCACCATATGGAGAGGCCACAACTTGAAGGGTTGATGATACCAAACAACAACAACAACAACAATAATCATCATAATAACAATGGTGAAAATTTGTGTTTGGGCAAGAAGAGGCCAAGTCCTTATAGTACTACTACTACTACTACTGGGAAGAGTCCTTTGATTTGGAACGACGATCTTCGGCTTCATCAAGATTTAGGGACGGCTTCGTCGTGCCTGGGTGGACCTCAAGATGATCCTTTCAAAGGTCTTGACCCGCATCAACTTCACATTGCACCGCCATCGTTGGATCATAGAGTTGGTGAAATGGATGCCATGTCAGAGGTTTATGACACGAAGTCGGTGCTACAAGGAGAAGCTGTGTGCGACAAATTTTCAGACGCTTCGGTGAAGCTTGAAAGGCCATCGCCGAGAAGGACACCGGCGACGACCACCCCTCTCCAGGGAGAAAGGATGAGCCCTATGATTAGTAGTGGTGCTATGGTACAAGGAAGAAACTCACCGTTTGGGTGA 1212 0.4728 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALELQRNNAPPSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAAANNLKGNINIGAAQAIPEIGVMKDFSSPLSFPFQELNIYGGGGSGGGCSDQLDHHLHHMERPQLEGLMIPNNNNNNNNHHNNNGENLCLGKKRPSPYSTTTTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDPHQLHIAPPSLDHRVGEMDAMSEVYDTKSVLQGEAVCDKFSDASVKLERPSPRRTPATTTPLQGERMSPMISSGAMVQGRNSPFG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2977 403 MobiDBLite consensus disorder prediction 371 385 - -
Acco01g2977 403 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Acco01g2977 403 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g2977 403 Gene3D - 34 92 - -
Acco01g2977 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 190 IPR044848 GO:0003700
Acco01g2977 403 MobiDBLite consensus disorder prediction 364 403 - -
Acco01g2977 403 FunFam Myb family transcription factor 34 92 - -
Acco01g2977 403 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Acco01g2977 403 MobiDBLite consensus disorder prediction 251 283 - -
Acco01g2977 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Acco01g2977 403 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Acco01g2977 403 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2977 Acco-ChrAcco01 46991960 46994756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2977 4 403 G2-like Transcription Factor Family AT1G79430 53.253 3.33e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco01g2977 Myb_DNA-binding 2.3e-06 CL0123