Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2945 ATGATGCAAGGAAGTGGACAAATAGCAGTGCCTCCAGGGTTCAGGTTTCACCCAACAGAGGAGGAGCTTCTTTACTATTATCTGAGGAAGAAAGTCTCTTTTGAAGCCATTGACCTTGACGTCATCCGAGAAGTTGATCTCAACAAACTTGAGCCTTGGGATCTCAAAGAAAAATGTAGGATTGGATCAGGACCTCAGAACGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACTGGAACCCGAACAAACCGGGCGACAATGGCCGGATTCTGGAAAGCAACAGGGAGGGACAAGGCCATATACATGAGCACTTTAAAGAGGATAGGGATGAGGAAAACCCTAGTGTTCTACACAGGCCGTGCTCCTCACGGCCAAAAGACTGACTGGATCATGCATGAGTACCGCCTAGACCAAGATGATGCTGATCAGCTTCAGGAAGATGGTTGGGTGGTGTGTAGGGTATTCAAGAAGAAGAACCTCAACAGAGGATTTCAACAGGAAATGGAAGAAGATGAGCAAACAATGAGCCACCACATGGCATCAACAAGTACTGCTTCTCATAATAATTGCATGAAGTTATTCAGCCCAGAATCTGCTGTACCACCCCTTCCTTCTGCAAACTCTTCGTCGTCTTCCACGTCGACTACTATGAACCCTATGGACGTCCTTCACTGTTCTCAAAGTTTACTTAGTCTGGCTTCAACTTCTTCTCTTCCACATGGAGGACTCCTTAGTAATCTCATGCAGCAACAATGTGATCATCAGAGACACAATAATAATAATGGAGCTTGGTCCTTCTTGGACAAGCTATTAGCTTCACAACAGCAACAACATCAACCTGTGGTTCCTCCCCTTGTGGCTTCTTCTTCCCACAAGTTTCCTTTTCATTACCTCGCTTCTGATCACAGTGACATCATGAAGTAA 933 0.4566 MMQGSGQIAVPPGFRFHPTEEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIYMSTLKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDQDDADQLQEDGWVVCRVFKKKNLNRGFQQEMEEDEQTMSHHMASTSTASHNNCMKLFSPESAVPPLPSANSSSSSTSTTMNPMDVLHCSQSLLSLASTSSLPHGGLLSNLMQQQCDHQRHNNNNGAWSFLDKLLASQQQQHQPVVPPLVASSSHKFPFHYLASDHSDIMK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2945 310 FunFam NAC domain-containing protein 19 164 - -
Acco01g2945 310 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Acco01g2945 310 MobiDBLite consensus disorder prediction 201 221 - -
Acco01g2945 310 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Acco01g2945 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 253 - -
Acco01g2945 310 MobiDBLite consensus disorder prediction 204 221 - -
Acco01g2945 310 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Acco01g2945 310 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2945 Acco-ChrAcco01 46636637 46638174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2945 2 276 NAC Transcription Factor Family AT1G79580 54.969 2.69e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g2945 NAM 1.2e-36 No_clan