Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2926 ATGGCTTTTATCCTTAACCCCAGCTTCTGCCGCCGCCTGTTATTAATTTCCCTTTACTTCCTTTTTTCTGCCATTAATTTACTTTCCGGCTCTGTTTCCATTTCTGGAACTTCCAACCACACATTAATCTGTGCCTTGCAGAGTACCAACCGGCTCCAAGGACAAAAAGCATTCCTCAACTGTACCAGTTTTCCCACTGGCATTCAAATTCAAGTGAACCCCAACATTTCCTTCTCTGAGATTGCTGGAGGAAATGGGTTTATCTGTGCATGTGCATTGAGGCCACCACCACTGGGTTCACCTTCTCCTTGTTTCATGTTTTGTTGGAGATTCTCTACCAATGCGACCAATGTTGTCCCCAAGAGAATATACCATGGGCCTATGATTCAGAATTTGGAAGCTGGAAACTCTCAAGTTTGTGGCCTTTCAAGCCCCAACAATGAGCTTAACTGCTGGCAATGGCCTGGGTTTAACACAAATGAAAGAAGCTTCTCGAGCATATCTGCGGGAGAGAATTTCGTTTGTGGGTTATTGGAAACATCTGGGAATATTCATTGCCTTGGAAATAATAGCACAGTTATTCGAGGTGAACCTAAAGGGAATTACTCTGTGATTGCTGCAGAGACAAGACATGCTTGTGCCATCTCCTCCATTAATGGAAGCTTGTATTGTTGGGGTGACGTACCAGGAGCCGTAATGAGGCCTCCTCCAGGGACATTCGTCTCTTTGGCTTTGGGAGATAATCGAAGTTGTGCTCTGAGGGCTGTGAATCACACAATTGTTTGTTGGGGGACGGATGGTTTTGACATGCCAGAGAGCTTGAGAAACCAATATTTTGTAGCAATCACAGCTAAAGGAAGCGTTTTCTGTGGTGTTATGTCTGGTGATTATTCTTTGCATTGTTGGGGAAATGATAATTTGGGGATGAACGGGACTGCTCATAAGGTGTTTGATGAGGTCCTACCTGGTCCTTGTAGAACTCAATGTCCATGTGGAATATTGCAAGGTTCTGCACAGTTTTGTGAACCGGGTCAAGGATCTATTTGCAGTTCTTGTGATAGCCAACTACCACCTGAATCCCAACCACCGCCTCCGCCATCACCAATAAGTGCTCCTTCACAATCAACGCAAAATGATTGGAACAGCAAAATGGTGGCATTTCTAGTGGTTGGCTGTGTTGGTTCACTTTCTTTGATGCTAGTCCTGGCATTCTTTCTCTATAAGTATTGCAAAGGCCGAGGATGCAAGCGTGTCCATGACTCCGGCCCGTTGGATGAGCCGGAAGATCAACCGGCAAACCAGCGAACTTTAGAGAAGAGATTGAGCCATATGATCAGCATGGGAAATGGAGGCCACTTGGAGGAATTTTCTTGGGAAATACTATTGGAAGCAACCAGCAATTTCTCAGAAGATAAAAAAATAGGAATAGGCAGTTTTGGTTCAGTGTACCATGCCACACTCAAAGATGGCAGAGAAGTGGCCGTCAAAAGAGCTGAGATCTCATCCACCTCCCCATCAAACCAAATCCAAGGAGGCTCCAAGCGTCAAGAAGACAAAGACAATGCCTTTGTGAATGAACTCGAATCCTTATCCAGACTCAACCATAAGAACTTGGTGATATTACTGGGTTTTTTCGAGGACAAGACTGAGAGAATTCTAGTCTACGAGTTTCTGAACAATGGTAGCCTCACAGACCACCTTCACAAGTTCCAAACTTCAACTCCTAATTGTCCTCTCATGTCTTGGTCAGGACGCATCCAAGTAGCTCTAGATGCAGCCAGAGGCATAGAGTACCTACACGAGTATGCAATTCCACCAATCATTCATCGTGATATCAAATCAGCAAACATACTATTAGACGCCAAATGGGTCGCCAAAGTATCAGATTTTGGACTCTCCCTAATGGGTCCTGAAGATGAAGATTCTCATCTTTCTCTTCTGGCTGCAGGCACCGTAGGGTACATGGATCCAGAGTACTACAGGCTGCAACTCTTGACCACAAAGAGTGACGTGTACAGTTTTGGTGTTGTTCTGCTTGAACTGCTTTGTGGGTATAAAGCTATACACCGGAACGAGAATGGGACGCCGAGGAATGTGGTGGATTTTGTGGTGCCATACATTGTGCAGGATGAGATTCATAGGGTTTTGGATCGGAGGTTGCCGCCTCCCACGCCGTATGAGATAGAGGCGGTGGCGTTTGTGGGATATTTGGCGGCAGATTGTGTGTGTTTAGAAGGACGTGATCGTCCTACAATGACTAACGTTGTAGATAGGCTGGAAAGAGCGTTGCATGCTTGTTTAGCTCAACCAAAAGCAAAACTTTCGAGCTTCAACTCTGATTCTGATTCTGATTAA 2355 0.4522 MAFILNPSFCRRLLLISLYFLFSAINLLSGSVSISGTSNHTLICALQSTNRLQGQKAFLNCTSFPTGIQIQVNPNISFSEIAGGNGFICACALRPPPLGSPSPCFMFCWRFSTNATNVVPKRIYHGPMIQNLEAGNSQVCGLSSPNNELNCWQWPGFNTNERSFSSISAGENFVCGLLETSGNIHCLGNNSTVIRGEPKGNYSVIAAETRHACAISSINGSLYCWGDVPGAVMRPPPGTFVSLALGDNRSCALRAVNHTIVCWGTDGFDMPESLRNQYFVAITAKGSVFCGVMSGDYSLHCWGNDNLGMNGTAHKVFDEVLPGPCRTQCPCGILQGSAQFCEPGQGSICSSCDSQLPPESQPPPPPSPISAPSQSTQNDWNSKMVAFLVVGCVGSLSLMLVLAFFLYKYCKGRGCKRVHDSGPLDEPEDQPANQRTLEKRLSHMISMGNGGHLEEFSWEILLEATSNFSEDKKIGIGSFGSVYHATLKDGREVAVKRAEISSTSPSNQIQGGSKRQEDKDNAFVNELESLSRLNHKNLVILLGFFEDKTERILVYEFLNNGSLTDHLHKFQTSTPNCPLMSWSGRIQVALDAARGIEYLHEYAIPPIIHRDIKSANILLDAKWVAKVSDFGLSLMGPEDEDSHLSLLAAGTVGYMDPEYYRLQLLTTKSDVYSFGVVLLELLCGYKAIHRNENGTPRNVVDFVVPYIVQDEIHRVLDRRLPPPTPYEIEAVAFVGYLAADCVCLEGRDRPTMTNVVDRLERALHACLAQPKAKLSSFNSDSDSD 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2926 784 Pfam Protein kinase domain 468 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2926 784 SMART serkin_6 468 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2926 784 Gene3D Phosphorylase Kinase; domain 1 440 557 - -
Acco01g2926 784 ProSiteProfiles Protein kinase domain profile. 468 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2926 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Acco01g2926 784 Gene3D Transferase(Phosphotransferase) domain 1 558 778 - -
Acco01g2926 784 CDD STKc_IRAK 474 761 - -
Acco01g2926 784 Gene3D - 196 326 IPR009091 -
Acco01g2926 784 MobiDBLite consensus disorder prediction 357 371 - -
Acco01g2926 784 SUPERFAMILY RCC1/BLIP-II 106 317 IPR009091 -
Acco01g2926 784 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 200 775 IPR044815 GO:0004674
Acco01g2926 784 MobiDBLite consensus disorder prediction 352 376 - -
Acco01g2926 784 ProSitePatterns Protein kinases ATP-binding region signature. 474 496 IPR017441 GO:0005524
Acco01g2926 784 Gene3D - 22 193 IPR009091 -
Acco01g2926 784 SUPERFAMILY Protein kinase-like (PK-like) 445 760 IPR011009 -
Acco01g2926 784 MobiDBLite consensus disorder prediction 497 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2926 Acco-ChrAcco01 46456469 46458823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2926 31 776 Receptor kinase-like Gene Family AT5G47850 49.803 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco01g2926 Pkinase 1.5e-42 CL0016