Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2914 ATGTCCTCCGCCACCGCTGCCGACATTTCCATCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACGTACTGGTGTCACGAATGCGACATGAGTGTTGCTCTGTCTTCCCCTTCGTCTTCAACTTCCTCGTCAACTCTTCTCTGCCCCCATTGCCACACCCACTTCCTCGAACTCATGGACTCTCCTTTTTTCCCTCAATCAGATTCTCATTCATTTCCCGCTTCGCTTTCCCTCTTCGACACCCCCTACCTCCACCACCTAATCCAGAACCACCTCCTTCCCTCGGACGACGACGAAAGTGAACTTGAGTACAACGACGTTTCCGAAGACCCGTTATCTCTGCTCTCCACACTACCGAATACCACTTCCAAATCTTGCTCTGATTCTGTACCCACGATAATAGTTACCTCTTCCTTGCTATCGCAGCTTGACCCTGGAGGCATTCTTTGTGCGGTTTGTAAGGACCCAATTGGGGTTGATGCGCAGGCTAAGCAGCTTCCGTGTAAGCATTTGTACCACTCCGATTGCATTACGCCGTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAAAAAGAGGAGGTTTCTCAGGCGAGGAGGATCAGAAGGCAGCTGAGGACAGCCATGATGAGGCTATCTGAATTGATGGAGGAGGAGGATGATTTCTATGGTTTGAGGACCACTCTGAGTCACATTGCTAGTAGACACCGCGTTCTTTCTTCTGCTGTTTCAGTCTCTTTCGGGCTGATTGGTCTTTTGTGCGTATTCAACACGATATTAGGTATAGGGTTTTTATTTGCCAAAGAAATCTTGAAGTTGTGTCAGCATAGATTGGCTAATCAAGTGTAA 867 0.4937 MSSATAADISIVPETAEAEMKTYWCHECDMSVALSSPSSSTSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPASLSLFDTPYLHHLIQNHLLPSDDDESELEYNDVSEDPLSLLSTLPNTTSKSCSDSVPTIIVTSSLLSQLDPGGILCAVCKDPIGVDAQAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEKEEVSQARRIRRQLRTAMMRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAVSVSFGLIGLLCVFNTILGIGFLFAKEILKLCQHRLANQV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2914 288 SMART ring_2 150 190 IPR001841 -
Acco01g2914 288 SUPERFAMILY RING/U-box 142 195 - -
Acco01g2914 288 Coils Coil 204 224 - -
Acco01g2914 288 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 83 194 - -
Acco01g2914 288 Pfam zinc-ribbon 22 59 IPR039525 GO:0061630
Acco01g2914 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 207 IPR013083 -
Acco01g2914 288 Pfam Ring finger domain 150 191 IPR001841 -
Acco01g2914 288 ProSiteProfiles Zinc finger RING-type profile. 150 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2914 Acco-ChrAcco01 46333602 46336070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2914 16 276 C3H Transcription Factor Family AT3G60080 35.275 2.63e-30 114