Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2899 ATGTGGAGATTTAAGCAATTCACACAAAGAGAGCCAGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATTTTAAAATAAATGTTCAAAAGGCCATTGCTGAAGGGGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGCACACATGTCAAAACAGTTTGCTTTGAAGCACATCATATGCAATGATGAAGAATCCCTCGGATTGGTCAAGAAGGAGATATCAGTGATGAAGTCATTGAAAGGGCATCCTAATATTGTCACACTTCATGCACATACAATTTTTGATATGGGCAGGACAAAAGAGGCATTCCTGTTGATGGAATTCTGTGAAAAGTCTCTGGTGCAGGTGTTGGAGAGCCGAGGAGCGGCGTATTTTGATGAGCAACGGGTTTTATTGATCTTCAGGGATGTATGTAATGCAGTTTTTGCAATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTGAAAGCTGAAAATCTTCTATTAACATCGGATGGCCAGTGGAAATTGTGCGACTTTGGAAGCACCTCCACCAACCACAAGCGCTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGATAATATCAGAAAGTACACAACTCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTTCTAAGAGAAGTCATTAATGAAAAAGTGGACATATGGGCTCTTGGGTGTCTTCTCTTTCGCATTTGCTACTTCAGGAGTGCATTTGATGGAGAATCCAAGCTTCAAGTCCTTAATGGAAACTATCGCATCCCTGATTTACCTAAATATAGTTCATCCATTGTTGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTTGGGTTAATGAGCAGTTACCTGTTAATTTGCGGAAGTCATTACCTGATACACCACCCGAATTTTCTTGTTCCAACTATCATGAAGGTGCATCAAAGCCTGCTAATAGATCAACCCCAGTGCCTCGTAGGAGTCCTCCCCTGCCATCTGTAGAACATAAAACTTCTTCACAGCCATCCCTTTCTTCTAGGGGAGGTGGAGGTGGGGGCCAGATTGGTGCTTTCTGGTCCACTCTGCATGCACAAAATTCACTTGCCACAGAAGGAAAGGGCAAACACATATTTGAAGAAAAACCAGCTATCCATCCTGTTTCATCAAAATTTGATGGGATTCGTCCGGAGAACAATCAATCACCTAGCACTGTTAGCCCTAACAACGTGGTCAATGCTCAGTCCCAAAGTTTGAAAAGCAGTTCCTATGGAAAATCAAGATTAGAGTCTGAGGTGGAGAAGATCAGGGAGCAGCTGAAGGAAGTTAACCTGGAAAAAGCTGAAATAACTTCCAAGTATGATAAGCTCACTTCCATCTGCCGATCTCAAAGACAAGAACTACAAGATCTCAAGCAGGCACTTGCAGCTAAAACCCCCTCACCAAATAAGGCGGCTCTTAGAACAGCTTCAACAATTGCAACATCTACTGCTATGGAACAAGTGCAAAATAAAGCTGAATGGAAAACTCCTGGTTCTGAACCTAAGTCGTCATGGCAAGCTTTTCCAGAACAACAGCTGCCGCAATCTGCTTCGGCGTACAATGCTTCCAAGTGTTTCGGGAGTAGGATTGATCAGCAAAACAATCAGCCTGCCCGGCCAACTAGTCAATTTAATTCTTGGGCGTTTGGAGCAGAAAGCTTTTCTGGTATCCATACTGGAAGCCCACAAATGCCTAGGCGTACTACTGATGGGAGTAATTCTCAGGCTAAGTCAGCTTCTCAGCCTGCTGGATGGGCTGGTTTTTAA 1827 0.4428 MWRFKQFTQREPAGLEGRTIDVGNFKINVQKAIAEGGFSCVYLARDAAHMSKQFALKHIICNDEESLGLVKKEISVMKSLKGHPNIVTLHAHTIFDMGRTKEAFLLMEFCEKSLVQVLESRGAAYFDEQRVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLTSDGQWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFRSAFDGESKLQVLNGNYRIPDLPKYSSSIVDLIRDMLQARPDDRPDITQVWFWVNEQLPVNLRKSLPDTPPEFSCSNYHEGASKPANRSTPVPRRSPPLPSVEHKTSSQPSLSSRGGGGGGQIGAFWSTLHAQNSLATEGKGKHIFEEKPAIHPVSSKFDGIRPENNQSPSTVSPNNVVNAQSQSLKSSSYGKSRLESEVEKIREQLKEVNLEKAEITSKYDKLTSICRSQRQELQDLKQALAAKTPSPNKAALRTASTIATSTAMEQVQNKAEWKTPGSEPKSSWQAFPEQQLPQSASAYNASKCFGSRIDQQNNQPARPTSQFNSWAFGAESFSGIHTGSPQMPRRTTDGSNSQAKSASQPAGWAGF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2899 608 Coils Coil 432 480 - -
Acco01g2899 608 MobiDBLite consensus disorder prediction 550 608 - -
Acco01g2899 608 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2899 608 SUPERFAMILY Protein kinase-like (PK-like) 28 340 IPR011009 -
Acco01g2899 608 MobiDBLite consensus disorder prediction 393 432 - -
Acco01g2899 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Acco01g2899 608 MobiDBLite consensus disorder prediction 550 601 - -
Acco01g2899 608 MobiDBLite consensus disorder prediction 312 364 - -
Acco01g2899 608 MobiDBLite consensus disorder prediction 340 355 - -
Acco01g2899 608 CDD STKc_GAK_like 26 298 - -
Acco01g2899 608 SMART serkin_6 27 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2899 608 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Acco01g2899 608 PANTHER SERINE/THREONINE PROTEIN KINASE 1 601 - -
Acco01g2899 608 MobiDBLite consensus disorder prediction 509 530 - -
Acco01g2899 608 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2899 608 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Acco01g2899 608 MobiDBLite consensus disorder prediction 400 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2899 Acco-ChrAcco01 46208894 46212045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2899 26 291 Miscellaneous Gene Families AT2G34180 29.643 8.87e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Acco01g2899 Pkinase 2.4e-40 CL0016